RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 ARHGEF25Q86VW2 580 aa17.53■□□□□ 0.4
SMCR2-201ENST00000456090 AXIN2Q9Y2T1 843 aa17.53■□□□□ 0.4
SMCR2-201ENST00000456090 DISP2A7MBM2 1401 aa17.53■□□□□ 0.4
SMCR2-201ENST00000456090 TOM1L2Q6ZVM7 507 aa17.52■□□□□ 0.4
SMCR2-201ENST00000456090 SLC12A5Q9H2X9 1139 aa17.52■□□□□ 0.4
SMCR2-201ENST00000456090 ST20-MTHFSA0A0A6YYL1 179 aa17.51■□□□□ 0.39
SMCR2-201ENST00000456090 HDGFL2Q7Z4V5 671 aaPredicted RBP17.51■□□□□ 0.39
SMCR2-201ENST00000456090 WDR17Q8IZU2 1322 aa17.5■□□□□ 0.39
SMCR2-201ENST00000456090 PEAK1Q9H792 1746 aa17.5■□□□□ 0.39
SMCR2-201ENST00000456090 ABCC6O95255 1503 aa17.5■□□□□ 0.39
SMCR2-201ENST00000456090 A0A1W2PP64 1363 aa17.5■□□□□ 0.39
SMCR2-201ENST00000456090 RREB1Q92766 1687 aa17.49■□□□□ 0.39
SMCR2-201ENST00000456090 EDC4Q6P2E9 1401 aaKnown RBP17.49■□□□□ 0.39
SMCR2-201ENST00000456090 EZH2Q15910 746 aaKnown RBP17.49■□□□□ 0.39
SMCR2-201ENST00000456090 NME9Q86XW9 330 aa17.49■□□□□ 0.39
SMCR2-201ENST00000456090 PUS7Q96PZ0 661 aaKnown RBP17.49■□□□□ 0.39
SMCR2-201ENST00000456090 TESK2Q96S53 571 aa17.49■□□□□ 0.39
SMCR2-201ENST00000456090 TERF2IPQ9NYB0 399 aa17.49■□□□□ 0.39
SMCR2-201ENST00000456090 USP31Q70CQ4 1352 aa17.49■□□□□ 0.39
SMCR2-201ENST00000456090 PSDA5PKW4 1024 aaPredicted RBP17.48■□□□□ 0.39
SMCR2-201ENST00000456090 APBA3O96018 575 aa17.48■□□□□ 0.39
SMCR2-201ENST00000456090 CSB-PGBD3P0DP91 1061 aa17.47■□□□□ 0.39
SMCR2-201ENST00000456090 NUP188Q5SRE5 1749 aa17.47■□□□□ 0.39
SMCR2-201ENST00000456090 LRP5O75197 1615 aa17.47■□□□□ 0.39
SMCR2-201ENST00000456090 DDB1Q16531 1140 aa17.46■□□□□ 0.39
SMCR2-201ENST00000456090 CAMKK2Q96RR4 588 aa17.46■□□□□ 0.39
SMCR2-201ENST00000456090 OVOS2A0A0G2JMS6 1433 aa17.46■□□□□ 0.39
SMCR2-201ENST00000456090 OVOS2A0A0J9YW53 1432 aa17.46■□□□□ 0.39
SMCR2-201ENST00000456090 OVOS2Q6IE36 1432 aa17.46■□□□□ 0.39
SMCR2-201ENST00000456090 NINLQ9Y2I6 1382 aa17.45■□□□□ 0.38
SMCR2-201ENST00000456090 KAT6BQ8WYB5 2073 aa17.45■□□□□ 0.38
SMCR2-201ENST00000456090 CARD10Q9BWT7 1032 aa17.45■□□□□ 0.38
SMCR2-201ENST00000456090 PARD3Q8TEW0 1356 aa17.44■□□□□ 0.38
SMCR2-201ENST00000456090 USP47Q96K76 1375 aa17.44■□□□□ 0.38
SMCR2-201ENST00000456090 SLC24A1O60721 1099 aa17.44■□□□□ 0.38
SMCR2-201ENST00000456090 C11orf95C9JLR9 678 aaPredicted RBP17.43■□□□□ 0.38
SMCR2-201ENST00000456090 CDCA7Q9BWT1 371 aaPredicted RBP17.43■□□□□ 0.38
SMCR2-201ENST00000456090 RGPD3A6NKT7 1758 aaPredicted RBP17.43■□□□□ 0.38
SMCR2-201ENST00000456090 RGPD4Q7Z3J3 1758 aa17.43■□□□□ 0.38
SMCR2-201ENST00000456090 R3HDM1Q15032 1099 aaKnown RBP17.42■□□□□ 0.38
SMCR2-201ENST00000456090 ERBB3P21860 1342 aa17.41■□□□□ 0.38
SMCR2-201ENST00000456090 CCDC7Q96M83 1385 aa17.4■□□□□ 0.38
SMCR2-201ENST00000456090 PCGF6Q9BYE7 350 aa17.4■□□□□ 0.38
SMCR2-201ENST00000456090 FAM208AQ9UK61 1670 aaKnown RBP17.39■□□□□ 0.37
SMCR2-201ENST00000456090 TMF1P82094 1093 aa17.39■□□□□ 0.37
SMCR2-201ENST00000456090 MARCH10Q8NA82 808 aaPredicted RBP17.39■□□□□ 0.37
SMCR2-201ENST00000456090 KIF20BQ96Q89 1820 aa17.39■□□□□ 0.37
SMCR2-201ENST00000456090 ANKRD36BQ8N2N9 1353 aa17.39■□□□□ 0.37
SMCR2-201ENST00000456090 RGPD2P0DJD1 1756 aa17.38■□□□□ 0.37
SMCR2-201ENST00000456090 NLRP2Q9NX02 1062 aa17.38■□□□□ 0.37
SMCR2-201ENST00000456090 EXOC5O00471 708 aa17.37■□□□□ 0.37
SMCR2-201ENST00000456090 ANKRD24Q8TF21 1146 aa17.37■□□□□ 0.37
SMCR2-201ENST00000456090 TNS2Q63HR2 1409 aa17.37■□□□□ 0.37
SMCR2-201ENST00000456090 MYOM1P52179 1685 aa17.36■□□□□ 0.37
SMCR2-201ENST00000456090 COG3Q96JB2 828 aa17.36■□□□□ 0.37
SMCR2-201ENST00000456090 CLSPNQ9HAW4 1339 aa17.36■□□□□ 0.37
SMCR2-201ENST00000456090 BCL9O00512 1426 aa17.36■□□□□ 0.37
SMCR2-201ENST00000456090 PTF1AQ7RTS3 328 aa17.35■□□□□ 0.37
SMCR2-201ENST00000456090 BCL11BQ9C0K0 894 aaPredicted RBP17.35■□□□□ 0.37
SMCR2-201ENST00000456090 TIMELESSQ9UNS1 1208 aa17.35■□□□□ 0.37
SMCR2-201ENST00000456090 NBPF14Q5TI25 921 aa17.34■□□□□ 0.37
SMCR2-201ENST00000456090 NHSQ6T4R5 1651 aa17.34■□□□□ 0.37
SMCR2-201ENST00000456090 IP6K1Q92551 441 aa17.34■□□□□ 0.37
SMCR2-201ENST00000456090 PLSCR1O15162 318 aa17.33■□□□□ 0.36
SMCR2-201ENST00000456090 IL2RBP14784 551 aa17.33■□□□□ 0.36
SMCR2-201ENST00000456090 FBLN1P23142 703 aa17.32■□□□□ 0.36
SMCR2-201ENST00000456090 CDCA8Q53HL2 280 aa17.32■□□□□ 0.36
SMCR2-201ENST00000456090 BTAF1O14981 1849 aa17.31■□□□□ 0.36
SMCR2-201ENST00000456090 MAP3K19Q56UN5 1328 aa17.31■□□□□ 0.36
SMCR2-201ENST00000456090 LTV1Q96GA3 475 aaPredicted RBP17.31■□□□□ 0.36
SMCR2-201ENST00000456090 FYB1O15117 783 aa17.3■□□□□ 0.36
SMCR2-201ENST00000456090 AMPHP49418 695 aa17.3■□□□□ 0.36
SMCR2-201ENST00000456090 GGNBP2Q9H3C7 697 aa17.3■□□□□ 0.36
SMCR2-201ENST00000456090 HOXC9P31274 260 aa17.29■□□□□ 0.36
SMCR2-201ENST00000456090 SHANK3Q9BYB0 1731 aa17.28■□□□□ 0.36
SMCR2-201ENST00000456090 KCNQ2O43526 872 aa17.27■□□□□ 0.36
SMCR2-201ENST00000456090 RRS1Q15050 365 aaKnown RBP17.27■□□□□ 0.36
SMCR2-201ENST00000456090 PROM2Q8N271 834 aa17.27■□□□□ 0.36
SMCR2-201ENST00000456090 ACSBG1Q96GR2 724 aa17.27■□□□□ 0.36
SMCR2-201ENST00000456090 RTL1A6NKG5 1358 aa17.27■□□□□ 0.35
SMCR2-201ENST00000456090 MAP2P11137 1827 aaKnown RBP17.26■□□□□ 0.35
SMCR2-201ENST00000456090 CASZ1Q86V15 1759 aa17.26■□□□□ 0.35
SMCR2-201ENST00000456090 NSD3Q9BZ95 1437 aa17.25■□□□□ 0.35
SMCR2-201ENST00000456090 ANO8Q9HCE9 1232 aaPredicted RBP17.25■□□□□ 0.35
SMCR2-201ENST00000456090 DOT1LQ8TEK3 1739 aa17.24■□□□□ 0.35
SMCR2-201ENST00000456090 CCER1Q8TC90 406 aaPredicted RBP17.24■□□□□ 0.35
SMCR2-201ENST00000456090 UTRNP46939 3433 aa17.23■□□□□ 0.35
SMCR2-201ENST00000456090 TXNRD1Q16881 649 aa17.23■□□□□ 0.35
SMCR2-201ENST00000456090 DDX54Q8TDD1 881 aaKnown RBP17.23■□□□□ 0.35
SMCR2-201ENST00000456090 CARD14Q9BXL6 1004 aa17.23■□□□□ 0.35
SMCR2-201ENST00000456090 SMG6Q86US8 1419 aaKnown RBP17.21■□□□□ 0.35
SMCR2-201ENST00000456090 MEGF6O75095 1541 aa17.21■□□□□ 0.35
SMCR2-201ENST00000456090 ANKRD26Q9UPS8 1709 aa17.21■□□□□ 0.35
SMCR2-201ENST00000456090 FLT4P35916 1363 aa17.2■□□□□ 0.34
SMCR2-201ENST00000456090 NBPF6Q5VWK0 638 aa17.2■□□□□ 0.34
SMCR2-201ENST00000456090 NBPF4Q96M43 638 aa17.2■□□□□ 0.34
SMCR2-201ENST00000456090 POLR3GLQ9BT43 218 aa17.2■□□□□ 0.34
SMCR2-201ENST00000456090 SPON1Q9HCB6 807 aa17.2■□□□□ 0.34
SMCR2-201ENST00000456090 PAPPAQ13219 1627 aa17.19■□□□□ 0.34
SMCR2-201ENST00000456090 HSP90AB2PQ58FF8 381 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms