RNA–Protein interactions for RNA: ENST00000455830.2

CRAT-206, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-206ENST00000455830 ARHGEF25Q86VW2 580 aa30.15■■■□□ 2.42
CRAT-206ENST00000455830 CARD11Q9BXL7 1154 aa30.15■■■□□ 2.42
CRAT-206ENST00000455830 NUP188Q5SRE5 1749 aa30.14■■■□□ 2.42
CRAT-206ENST00000455830 NFAT5O94916 1531 aa30.14■■■□□ 2.42
CRAT-206ENST00000455830 SOX12O15370 315 aa30.14■■■□□ 2.42
CRAT-206ENST00000455830 KCNH5Q8NCM2 988 aa30.14■■■□□ 2.42
CRAT-206ENST00000455830 WDR17Q8IZU2 1322 aa30.14■■■□□ 2.42
CRAT-206ENST00000455830 OVOS2A0A0G2JMS6 1433 aa30.12■■■□□ 2.41
CRAT-206ENST00000455830 OVOS2A0A0J9YW53 1432 aa30.12■■■□□ 2.41
CRAT-206ENST00000455830 OVOS2Q6IE36 1432 aa30.12■■■□□ 2.41
CRAT-206ENST00000455830 TONSLQ96HA7 1378 aa30.1■■■□□ 2.41
CRAT-206ENST00000455830 CD163L1Q9NR16 1453 aa30.1■■■□□ 2.41
CRAT-206ENST00000455830 SBF2Q86WG5 1849 aa30.09■■■□□ 2.41
CRAT-206ENST00000455830 USP54Q70EL1 1684 aa30.08■■■□□ 2.41
CRAT-206ENST00000455830 DDB1Q16531 1140 aa30.08■■■□□ 2.41
CRAT-206ENST00000455830 C11orf95C9JLR9 678 aaPredicted RBP30.07■■■□□ 2.4
CRAT-206ENST00000455830 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.06■■■□□ 2.4
CRAT-206ENST00000455830 ABCC6O95255 1503 aa30.05■■■□□ 2.4
CRAT-206ENST00000455830 USP31Q70CQ4 1352 aa30.04■■■□□ 2.4
CRAT-206ENST00000455830 CSB-PGBD3P0DP91 1061 aa30.03■■■□□ 2.4
CRAT-206ENST00000455830 CARD10Q9BWT7 1032 aa30.03■■■□□ 2.4
CRAT-206ENST00000455830 TMC1Q8TDI8 760 aa30.02■■■□□ 2.4
CRAT-206ENST00000455830 RGPD3A6NKT7 1758 aaPredicted RBP30.02■■■□□ 2.4
CRAT-206ENST00000455830 RGPD4Q7Z3J3 1758 aa30.02■■■□□ 2.4
CRAT-206ENST00000455830 NME9Q86XW9 330 aa30.01■■■□□ 2.39
CRAT-206ENST00000455830 CDCA7Q9BWT1 371 aaPredicted RBP30.01■■■□□ 2.39
CRAT-206ENST00000455830 MARCH10Q8NA82 808 aaPredicted RBP30■■■□□ 2.39
CRAT-206ENST00000455830 SLC12A5Q9H2X9 1139 aa30■■■□□ 2.39
CRAT-206ENST00000455830 LTN1O94822 1766 aa30■■■□□ 2.39
CRAT-206ENST00000455830 NBPF14Q5TI25 921 aa29.99■■■□□ 2.39
CRAT-206ENST00000455830 HDGFL2Q7Z4V5 671 aaPredicted RBP29.98■■■□□ 2.39
CRAT-206ENST00000455830 EDC4Q6P2E9 1401 aaKnown RBP29.97■■■□□ 2.39
CRAT-206ENST00000455830 PTF1AQ7RTS3 328 aa29.97■■■□□ 2.39
CRAT-206ENST00000455830 CCDC7Q96M83 1385 aa29.97■■■□□ 2.39
CRAT-206ENST00000455830 BCL9O00512 1426 aa29.96■■■□□ 2.39
CRAT-206ENST00000455830 A0A1W2PP64 1363 aa29.96■■■□□ 2.39
CRAT-206ENST00000455830 BCL11BQ9C0K0 894 aaPredicted RBP29.95■■■□□ 2.39
CRAT-206ENST00000455830 PLSCR1O15162 318 aa29.94■■■□□ 2.38
CRAT-206ENST00000455830 PUS7Q96PZ0 661 aaKnown RBP29.93■■■□□ 2.38
CRAT-206ENST00000455830 ERBB3P21860 1342 aa29.93■■■□□ 2.38
CRAT-206ENST00000455830 TERF2IPQ9NYB0 399 aa29.92■■■□□ 2.38
CRAT-206ENST00000455830 TNS2Q63HR2 1409 aa29.91■■■□□ 2.38
CRAT-206ENST00000455830 TESK2Q96S53 571 aa29.91■■■□□ 2.38
CRAT-206ENST00000455830 EXOC5O00471 708 aa29.9■■■□□ 2.38
CRAT-206ENST00000455830 ST20-MTHFSA0A0A6YYL1 179 aa29.88■■■□□ 2.37
CRAT-206ENST00000455830 ANO8Q9HCE9 1232 aaPredicted RBP29.86■■■□□ 2.37
CRAT-206ENST00000455830 NLRP2Q9NX02 1062 aa29.86■■■□□ 2.37
CRAT-206ENST00000455830 ANKRD24Q8TF21 1146 aa29.85■■■□□ 2.37
CRAT-206ENST00000455830 NINLQ9Y2I6 1382 aa29.85■■■□□ 2.37
CRAT-206ENST00000455830 PROM2Q8N271 834 aa29.84■■■□□ 2.37
CRAT-206ENST00000455830 NHSQ6T4R5 1651 aa29.83■■■□□ 2.37
CRAT-206ENST00000455830 TRIM26Q12899 539 aaPredicted RBP29.82■■■□□ 2.36
CRAT-206ENST00000455830 CASZ1Q86V15 1759 aa29.82■■■□□ 2.36
CRAT-206ENST00000455830 IL2RBP14784 551 aa29.81■■■□□ 2.36
CRAT-206ENST00000455830 SPON1Q9HCB6 807 aa29.8■■■□□ 2.36
CRAT-206ENST00000455830 KCNQ2O43526 872 aa29.79■■■□□ 2.36
CRAT-206ENST00000455830 FAM208AQ9UK61 1670 aaKnown RBP29.77■■■□□ 2.36
CRAT-206ENST00000455830 TXNRD1Q16881 649 aa29.77■■■□□ 2.36
CRAT-206ENST00000455830 SLC24A1O60721 1099 aa29.76■■■□□ 2.35
CRAT-206ENST00000455830 IP6K1Q92551 441 aa29.76■■■□□ 2.35
CRAT-206ENST00000455830 ACSBG1Q96GR2 724 aa29.76■■■□□ 2.35
CRAT-206ENST00000455830 ANKRD36BQ8N2N9 1353 aa29.75■■■□□ 2.35
CRAT-206ENST00000455830 COG3Q96JB2 828 aa29.74■■■□□ 2.35
CRAT-206ENST00000455830 PDGFDQ9GZP0 370 aaPredicted RBP29.73■■■□□ 2.35
CRAT-206ENST00000455830 USP47Q96K76 1375 aa29.73■■■□□ 2.35
CRAT-206ENST00000455830 LTV1Q96GA3 475 aaPredicted RBP29.72■■■□□ 2.35
CRAT-206ENST00000455830 PPP1R1BQ9UD71 204 aaPredicted RBP29.72■■■□□ 2.35
CRAT-206ENST00000455830 BTAF1O14981 1849 aa29.72■■■□□ 2.35
CRAT-206ENST00000455830 MAP3K19Q56UN5 1328 aa29.71■■■□□ 2.35
CRAT-206ENST00000455830 FBLN1P23142 703 aa29.71■■■□□ 2.35
CRAT-206ENST00000455830 TMF1P82094 1093 aa29.69■■■□□ 2.34
CRAT-206ENST00000455830 RGPD2P0DJD1 1756 aa29.68■■■□□ 2.34
CRAT-206ENST00000455830 HOXC9P31274 260 aa29.68■■■□□ 2.34
CRAT-206ENST00000455830 STK32BQ9NY57 414 aa29.68■■■□□ 2.34
CRAT-206ENST00000455830 SLC15A2Q16348 729 aa29.67■■■□□ 2.34
CRAT-206ENST00000455830 PAPPAQ13219 1627 aa29.66■■■□□ 2.34
CRAT-206ENST00000455830 KAT6BQ8WYB5 2073 aa29.65■■■□□ 2.34
CRAT-206ENST00000455830 ZBTB7AO95365 584 aa29.65■■■□□ 2.34
CRAT-206ENST00000455830 AMPHP49418 695 aa29.65■■■□□ 2.34
CRAT-206ENST00000455830 MYOM1P52179 1685 aa29.63■■■□□ 2.33
CRAT-206ENST00000455830 FYB1O15117 783 aa29.62■■■□□ 2.33
CRAT-206ENST00000455830 DDX54Q8TDD1 881 aaKnown RBP29.62■■■□□ 2.33
CRAT-206ENST00000455830 RTL1A6NKG5 1358 aa29.62■■■□□ 2.33
CRAT-206ENST00000455830 SHANK3Q9BYB0 1731 aa29.62■■■□□ 2.33
CRAT-206ENST00000455830 RRS1Q15050 365 aaKnown RBP29.61■■■□□ 2.33
CRAT-206ENST00000455830 GGNBP2Q9H3C7 697 aa29.61■■■□□ 2.33
CRAT-206ENST00000455830 KIF20BQ96Q89 1820 aa29.61■■■□□ 2.33
CRAT-206ENST00000455830 PTGER2P43116 358 aa29.6■■■□□ 2.33
CRAT-206ENST00000455830 ATF5Q9Y2D1 282 aaPredicted RBP29.59■■■□□ 2.33
CRAT-206ENST00000455830 MEGF6O75095 1541 aa29.59■■■□□ 2.33
CRAT-206ENST00000455830 DOT1LQ8TEK3 1739 aa29.58■■■□□ 2.33
CRAT-206ENST00000455830 LRRC4BQ9NT99 713 aa29.56■■■□□ 2.32
CRAT-206ENST00000455830 CDCA8Q53HL2 280 aa29.55■■■□□ 2.32
CRAT-206ENST00000455830 ZNF827Q17R98 1081 aa29.54■■■□□ 2.32
CRAT-206ENST00000455830 NBPF6Q5VWK0 638 aa29.53■■■□□ 2.32
CRAT-206ENST00000455830 NBPF4Q96M43 638 aa29.53■■■□□ 2.32
CRAT-206ENST00000455830 MTFR1LQ9H019 292 aa29.53■■■□□ 2.32
CRAT-206ENST00000455830 ZCRB1Q8TBF4 217 aaKnown RBP29.52■■■□□ 2.32
CRAT-206ENST00000455830 SMG6Q86US8 1419 aaKnown RBP29.51■■■□□ 2.31
CRAT-206ENST00000455830 NSD2O96028 1365 aa29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms