RNA–Protein interactions for RNA: ENST00000455768.6

YIPF3-204, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-204ENST00000455768 NFAT5O94916 1531 aa28.92■■■□□ 2.22
YIPF3-204ENST00000455768 CARD11Q9BXL7 1154 aa28.91■■■□□ 2.22
YIPF3-204ENST00000455768 CD163L1Q9NR16 1453 aa28.91■■■□□ 2.22
YIPF3-204ENST00000455768 KCNH5Q8NCM2 988 aa28.9■■■□□ 2.22
YIPF3-204ENST00000455768 NUP188Q5SRE5 1749 aa28.89■■■□□ 2.22
YIPF3-204ENST00000455768 MON2Q7Z3U7 1717 aa28.89■■■□□ 2.22
YIPF3-204ENST00000455768 RGPD5Q99666 1765 aa28.89■■■□□ 2.22
YIPF3-204ENST00000455768 OVOS2A0A0G2JMS6 1433 aa28.88■■■□□ 2.21
YIPF3-204ENST00000455768 OVOS2A0A0J9YW53 1432 aa28.88■■■□□ 2.21
YIPF3-204ENST00000455768 OVOS2Q6IE36 1432 aa28.88■■■□□ 2.21
YIPF3-204ENST00000455768 DDB1Q16531 1140 aa28.87■■■□□ 2.21
YIPF3-204ENST00000455768 PTF1AQ7RTS3 328 aa28.87■■■□□ 2.21
YIPF3-204ENST00000455768 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.86■■■□□ 2.21
YIPF3-204ENST00000455768 WNK3Q9BYP7 1800 aa28.85■■■□□ 2.21
YIPF3-204ENST00000455768 NME9Q86XW9 330 aa28.84■■■□□ 2.21
YIPF3-204ENST00000455768 MARCH10Q8NA82 808 aaPredicted RBP28.84■■■□□ 2.21
YIPF3-204ENST00000455768 CARD10Q9BWT7 1032 aa28.83■■■□□ 2.21
YIPF3-204ENST00000455768 SLC12A5Q9H2X9 1139 aa28.83■■■□□ 2.21
YIPF3-204ENST00000455768 USP31Q70CQ4 1352 aa28.83■■■□□ 2.21
YIPF3-204ENST00000455768 TONSLQ96HA7 1378 aa28.83■■■□□ 2.21
YIPF3-204ENST00000455768 CSB-PGBD3P0DP91 1061 aa28.82■■■□□ 2.2
YIPF3-204ENST00000455768 SBF2Q86WG5 1849 aa28.82■■■□□ 2.2
YIPF3-204ENST00000455768 TMC1Q8TDI8 760 aa28.81■■■□□ 2.2
YIPF3-204ENST00000455768 C11orf95C9JLR9 678 aaPredicted RBP28.8■■■□□ 2.2
YIPF3-204ENST00000455768 USP54Q70EL1 1684 aa28.79■■■□□ 2.2
YIPF3-204ENST00000455768 CDCA7Q9BWT1 371 aaPredicted RBP28.78■■■□□ 2.2
YIPF3-204ENST00000455768 NBPF14Q5TI25 921 aa28.77■■■□□ 2.2
YIPF3-204ENST00000455768 ABCC6O95255 1503 aa28.77■■■□□ 2.2
YIPF3-204ENST00000455768 BCL11BQ9C0K0 894 aaPredicted RBP28.76■■■□□ 2.19
YIPF3-204ENST00000455768 BCL9O00512 1426 aa28.76■■■□□ 2.19
YIPF3-204ENST00000455768 A0A1W2PP64 1363 aa28.75■■■□□ 2.19
YIPF3-204ENST00000455768 PLSCR1O15162 318 aa28.75■■■□□ 2.19
YIPF3-204ENST00000455768 EDC4Q6P2E9 1401 aaKnown RBP28.73■■■□□ 2.19
YIPF3-204ENST00000455768 HDGFL2Q7Z4V5 671 aaPredicted RBP28.73■■■□□ 2.19
YIPF3-204ENST00000455768 TESK2Q96S53 571 aa28.73■■■□□ 2.19
YIPF3-204ENST00000455768 CCDC7Q96M83 1385 aa28.73■■■□□ 2.19
YIPF3-204ENST00000455768 RGPD3A6NKT7 1758 aaPredicted RBP28.73■■■□□ 2.19
YIPF3-204ENST00000455768 RGPD4Q7Z3J3 1758 aa28.73■■■□□ 2.19
YIPF3-204ENST00000455768 ERBB3P21860 1342 aa28.72■■■□□ 2.19
YIPF3-204ENST00000455768 PROM2Q8N271 834 aa28.72■■■□□ 2.19
YIPF3-204ENST00000455768 ANO8Q9HCE9 1232 aaPredicted RBP28.72■■■□□ 2.19
YIPF3-204ENST00000455768 EXOC5O00471 708 aa28.7■■■□□ 2.18
YIPF3-204ENST00000455768 LTN1O94822 1766 aa28.7■■■□□ 2.18
YIPF3-204ENST00000455768 TNS2Q63HR2 1409 aa28.69■■■□□ 2.18
YIPF3-204ENST00000455768 ST20-MTHFSA0A0A6YYL1 179 aa28.69■■■□□ 2.18
YIPF3-204ENST00000455768 PUS7Q96PZ0 661 aaKnown RBP28.69■■■□□ 2.18
YIPF3-204ENST00000455768 TERF2IPQ9NYB0 399 aa28.69■■■□□ 2.18
YIPF3-204ENST00000455768 NLRP2Q9NX02 1062 aa28.68■■■□□ 2.18
YIPF3-204ENST00000455768 KCNQ2O43526 872 aa28.65■■■□□ 2.18
YIPF3-204ENST00000455768 ANKRD24Q8TF21 1146 aa28.65■■■□□ 2.18
YIPF3-204ENST00000455768 PDGFDQ9GZP0 370 aaPredicted RBP28.65■■■□□ 2.18
YIPF3-204ENST00000455768 SPON1Q9HCB6 807 aa28.62■■■□□ 2.17
YIPF3-204ENST00000455768 IL2RBP14784 551 aa28.61■■■□□ 2.17
YIPF3-204ENST00000455768 TXNRD1Q16881 649 aa28.61■■■□□ 2.17
YIPF3-204ENST00000455768 ACSBG1Q96GR2 724 aa28.59■■■□□ 2.17
YIPF3-204ENST00000455768 CASZ1Q86V15 1759 aa28.59■■■□□ 2.17
YIPF3-204ENST00000455768 NINLQ9Y2I6 1382 aa28.59■■■□□ 2.17
YIPF3-204ENST00000455768 FBLN1P23142 703 aa28.58■■■□□ 2.17
YIPF3-204ENST00000455768 NHSQ6T4R5 1651 aa28.58■■■□□ 2.16
YIPF3-204ENST00000455768 IP6K1Q92551 441 aa28.57■■■□□ 2.16
YIPF3-204ENST00000455768 TRIM26Q12899 539 aaPredicted RBP28.55■■■□□ 2.16
YIPF3-204ENST00000455768 LTV1Q96GA3 475 aaPredicted RBP28.55■■■□□ 2.16
YIPF3-204ENST00000455768 MAP3K19Q56UN5 1328 aa28.54■■■□□ 2.16
YIPF3-204ENST00000455768 PPP1R1BQ9UD71 204 aaPredicted RBP28.53■■■□□ 2.16
YIPF3-204ENST00000455768 COG3Q96JB2 828 aa28.52■■■□□ 2.16
YIPF3-204ENST00000455768 ANKRD36BQ8N2N9 1353 aa28.51■■■□□ 2.16
YIPF3-204ENST00000455768 USP47Q96K76 1375 aa28.51■■■□□ 2.16
YIPF3-204ENST00000455768 ZBTB7AO95365 584 aa28.51■■■□□ 2.15
YIPF3-204ENST00000455768 HOXC9P31274 260 aa28.5■■■□□ 2.15
YIPF3-204ENST00000455768 SLC15A2Q16348 729 aa28.49■■■□□ 2.15
YIPF3-204ENST00000455768 STK32BQ9NY57 414 aa28.49■■■□□ 2.15
YIPF3-204ENST00000455768 BTAF1O14981 1849 aa28.48■■■□□ 2.15
YIPF3-204ENST00000455768 PTGER2P43116 358 aa28.47■■■□□ 2.15
YIPF3-204ENST00000455768 FAM208AQ9UK61 1670 aaKnown RBP28.46■■■□□ 2.15
YIPF3-204ENST00000455768 SLC24A1O60721 1099 aa28.46■■■□□ 2.15
YIPF3-204ENST00000455768 PAPPAQ13219 1627 aa28.45■■■□□ 2.14
YIPF3-204ENST00000455768 FYB1O15117 783 aa28.45■■■□□ 2.14
YIPF3-204ENST00000455768 AMPHP49418 695 aa28.45■■■□□ 2.14
YIPF3-204ENST00000455768 DDX54Q8TDD1 881 aaKnown RBP28.45■■■□□ 2.14
YIPF3-204ENST00000455768 GGNBP2Q9H3C7 697 aa28.45■■■□□ 2.14
YIPF3-204ENST00000455768 ATF5Q9Y2D1 282 aaPredicted RBP28.45■■■□□ 2.14
YIPF3-204ENST00000455768 TMF1P82094 1093 aa28.44■■■□□ 2.14
YIPF3-204ENST00000455768 RRS1Q15050 365 aaKnown RBP28.44■■■□□ 2.14
YIPF3-204ENST00000455768 RGPD2P0DJD1 1756 aa28.43■■■□□ 2.14
YIPF3-204ENST00000455768 LRRC4BQ9NT99 713 aa28.43■■■□□ 2.14
YIPF3-204ENST00000455768 MYOM1P52179 1685 aa28.42■■■□□ 2.14
YIPF3-204ENST00000455768 KAT6BQ8WYB5 2073 aa28.41■■■□□ 2.14
YIPF3-204ENST00000455768 MEGF6O75095 1541 aa28.41■■■□□ 2.14
YIPF3-204ENST00000455768 ZNF827Q17R98 1081 aa28.4■■■□□ 2.14
YIPF3-204ENST00000455768 NBPF6Q5VWK0 638 aa28.38■■■□□ 2.13
YIPF3-204ENST00000455768 NBPF4Q96M43 638 aa28.38■■■□□ 2.13
YIPF3-204ENST00000455768 SHANK3Q9BYB0 1731 aa28.38■■■□□ 2.13
YIPF3-204ENST00000455768 RTL1A6NKG5 1358 aa28.37■■■□□ 2.13
YIPF3-204ENST00000455768 SGIP1Q9BQI5 828 aa28.37■■■□□ 2.13
YIPF3-204ENST00000455768 USHBP1Q8N6Y0 703 aa28.36■■■□□ 2.13
YIPF3-204ENST00000455768 MTFR1LQ9H019 292 aa28.36■■■□□ 2.13
YIPF3-204ENST00000455768 PRIM1P49642 420 aaKnown RBP28.35■■■□□ 2.13
YIPF3-204ENST00000455768 CARD14Q9BXL6 1004 aa28.35■■■□□ 2.13
YIPF3-204ENST00000455768 NSD2O96028 1365 aa28.35■■■□□ 2.13
YIPF3-204ENST00000455768 YY1P25490 414 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms