RNA–Protein interactions for RNA: ENST00000455313.6

PDXDC1-204, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-204ENST00000455313 HOXC9P31274 260 aa22.12■■□□□ 1.13
PDXDC1-204ENST00000455313 PLEKHF1Q96S99 279 aa22.11■■□□□ 1.13
PDXDC1-204ENST00000455313 RSPH6AQ9H0K4 717 aa22.1■■□□□ 1.13
PDXDC1-204ENST00000455313 FCHSD2O94868 740 aa22.09■■□□□ 1.13
PDXDC1-204ENST00000455313 TCP11L2Q8N4U5 519 aa22.09■■□□□ 1.13
PDXDC1-204ENST00000455313 HMOX1P09601 288 aa22.09■■□□□ 1.13
PDXDC1-204ENST00000455313 ARHGEF25Q86VW2 580 aa22.08■■□□□ 1.13
PDXDC1-204ENST00000455313 ZNF521Q96K83 1311 aa22.08■■□□□ 1.12
PDXDC1-204ENST00000455313 AHDC1Q5TGY3 1603 aaPredicted RBP22.07■■□□□ 1.12
PDXDC1-204ENST00000455313 NGEFQ8N5V2 710 aa22.07■■□□□ 1.12
PDXDC1-204ENST00000455313 MAPK8IP3Q9UPT6 1336 aa22.07■■□□□ 1.12
PDXDC1-204ENST00000455313 PRKAR2BP31323 418 aa22.06■■□□□ 1.12
PDXDC1-204ENST00000455313 IP6K1Q92551 441 aa22.06■■□□□ 1.12
PDXDC1-204ENST00000455313 PNNQ9H307 717 aaKnown RBP22.06■■□□□ 1.12
PDXDC1-204ENST00000455313 ZBTB7CA1YPR0 619 aa22.06■■□□□ 1.12
PDXDC1-204ENST00000455313 CABLES1Q8TDN4 633 aa22.06■■□□□ 1.12
PDXDC1-204ENST00000455313 PDE3BQ13370 1112 aa22.05■■□□□ 1.12
PDXDC1-204ENST00000455313 RRP7AQ9Y3A4 280 aaKnown RBP22.05■■□□□ 1.12
PDXDC1-204ENST00000455313 ABCA3Q99758 1704 aa22.05■■□□□ 1.12
PDXDC1-204ENST00000455313 NEUROD2Q15784 382 aa22.04■■□□□ 1.12
PDXDC1-204ENST00000455313 AEBP1Q8IUX7 1158 aa22.04■■□□□ 1.12
PDXDC1-204ENST00000455313 ZC3H6P61129 1189 aaKnown RBP22.02■■□□□ 1.12
PDXDC1-204ENST00000455313 SULT6B1Q6IMI4 303 aa22.02■■□□□ 1.12
PDXDC1-204ENST00000455313 CDCA7LQ96GN5 454 aa22.02■■□□□ 1.12
PDXDC1-204ENST00000455313 IGSF1Q8N6C5 1336 aa22.02■■□□□ 1.12
PDXDC1-204ENST00000455313 EYA1Q99502 592 aa22.01■■□□□ 1.11
PDXDC1-204ENST00000455313 PHF23Q9BUL5 403 aaPredicted RBP22.01■■□□□ 1.11
PDXDC1-204ENST00000455313 KDRP35968 1356 aa22.01■■□□□ 1.11
PDXDC1-204ENST00000455313 LTV1Q96GA3 475 aaPredicted RBP22.01■■□□□ 1.11
PDXDC1-204ENST00000455313 RGPD5Q99666 1765 aa22.01■■□□□ 1.11
PDXDC1-204ENST00000455313 TOM1O60784 492 aa22■■□□□ 1.11
PDXDC1-204ENST00000455313 TMPOP42166 694 aaKnown RBP22■■□□□ 1.11
PDXDC1-204ENST00000455313 WWC1Q8IX03 1113 aa22■■□□□ 1.11
PDXDC1-204ENST00000455313 PHACTR3Q96KR7 559 aa22■■□□□ 1.11
PDXDC1-204ENST00000455313 NEFMP07197 916 aa21.99■■□□□ 1.11
PDXDC1-204ENST00000455313 NCBP3Q53F19 620 aaKnown RBP21.99■■□□□ 1.11
PDXDC1-204ENST00000455313 COL18A1P39060 1754 aa21.99■■□□□ 1.11
PDXDC1-204ENST00000455313 CCDC27Q2M243 656 aa21.99■■□□□ 1.11
PDXDC1-204ENST00000455313 GOLGA2Q08379 1002 aa21.98■■□□□ 1.11
PDXDC1-204ENST00000455313 CPDO75976 1380 aa21.98■■□□□ 1.11
PDXDC1-204ENST00000455313 ABCC6O95255 1503 aa21.98■■□□□ 1.11
PDXDC1-204ENST00000455313 RGPD2P0DJD1 1756 aa21.98■■□□□ 1.11
PDXDC1-204ENST00000455313 PHLPP1O60346 1717 aa21.97■■□□□ 1.11
PDXDC1-204ENST00000455313 KIAA0232Q92628 1395 aa21.97■■□□□ 1.11
PDXDC1-204ENST00000455313 AXIN2Q9Y2T1 843 aa21.97■■□□□ 1.11
PDXDC1-204ENST00000455313 COL16A1Q07092 1604 aaPredicted RBP21.96■■□□□ 1.11
PDXDC1-204ENST00000455313 LRRC59Q96AG4 307 aaKnown RBP21.96■■□□□ 1.11
PDXDC1-204ENST00000455313 PIP4K2BP78356 416 aa21.95■■□□□ 1.1
PDXDC1-204ENST00000455313 DLG5Q8TDM6 1919 aa21.95■■□□□ 1.1
PDXDC1-204ENST00000455313 UBAP1LF5GYI3 381 aa21.94■■□□□ 1.1
PDXDC1-204ENST00000455313 RIPK4P57078 832 aa21.94■■□□□ 1.1
PDXDC1-204ENST00000455313 NFE2L2Q16236 605 aa21.94■■□□□ 1.1
PDXDC1-204ENST00000455313 CAMTA1Q9Y6Y1 1673 aa21.94■■□□□ 1.1
PDXDC1-204ENST00000455313 ANKRD24Q8TF21 1146 aa21.94■■□□□ 1.1
PDXDC1-204ENST00000455313 SPINK5Q9NQ38 1064 aaPredicted RBP21.94■■□□□ 1.1
PDXDC1-204ENST00000455313 TRIM35Q9UPQ4 493 aa21.94■■□□□ 1.1
PDXDC1-204ENST00000455313 COL22A1Q8NFW1 1626 aaPredicted RBP21.93■■□□□ 1.1
PDXDC1-204ENST00000455313 ERBB3P21860 1342 aa21.93■■□□□ 1.1
PDXDC1-204ENST00000455313 HAP1P54257 671 aaPredicted RBP21.92■■□□□ 1.1
PDXDC1-204ENST00000455313 SLFN5Q08AF3 891 aa21.92■■□□□ 1.1
PDXDC1-204ENST00000455313 CHRNA2Q15822 529 aa21.92■■□□□ 1.1
PDXDC1-204ENST00000455313 NBPF6Q5VWK0 638 aa21.92■■□□□ 1.1
PDXDC1-204ENST00000455313 NBPF4Q96M43 638 aa21.92■■□□□ 1.1
PDXDC1-204ENST00000455313 USHBP1Q8N6Y0 703 aa21.92■■□□□ 1.1
PDXDC1-204ENST00000455313 DUSP27Q5VZP5 1158 aa21.91■■□□□ 1.1
PDXDC1-204ENST00000455313 NCAPD2Q15021 1401 aa21.91■■□□□ 1.1
PDXDC1-204ENST00000455313 WDR63Q8IWG1 891 aa21.91■■□□□ 1.1
PDXDC1-204ENST00000455313 LMO7Q8WWI1 1683 aa21.9■■□□□ 1.1
PDXDC1-204ENST00000455313 E9PSI1 815 aa21.9■■□□□ 1.1
PDXDC1-204ENST00000455313 CERKQ8TCT0 537 aa21.9■■□□□ 1.1
PDXDC1-204ENST00000455313 PRDM11Q9NQV5 511 aa21.9■■□□□ 1.1
PDXDC1-204ENST00000455313 TRMT2AQ8IZ69 625 aaKnown RBP21.89■■□□□ 1.1
PDXDC1-204ENST00000455313 FAM208AQ9UK61 1670 aaKnown RBP21.89■■□□□ 1.1
PDXDC1-204ENST00000455313 SUPT16HQ9Y5B9 1047 aaKnown RBP21.88■■□□□ 1.09
PDXDC1-204ENST00000455313 MTHFSDQ2M296 383 aaKnown RBP21.84■■□□□ 1.09
PDXDC1-204ENST00000455313 LMOD3Q0VAK6 560 aa21.84■■□□□ 1.09
PDXDC1-204ENST00000455313 IL16Q14005 1332 aa21.83■■□□□ 1.09
PDXDC1-204ENST00000455313 COL5A2P05997 1499 aaPredicted RBP21.83■■□□□ 1.09
PDXDC1-204ENST00000455313 PELP1Q8IZL8 1130 aaKnown RBP21.82■■□□□ 1.08
PDXDC1-204ENST00000455313 GAS2L2Q8NHY3 880 aa21.82■■□□□ 1.08
PDXDC1-204ENST00000455313 FAM83GA6ND36 823 aa21.81■■□□□ 1.08
PDXDC1-204ENST00000455313 CSB-PGBD3P0DP91 1061 aa21.81■■□□□ 1.08
PDXDC1-204ENST00000455313 THUMPD2Q9BTF0 503 aaKnown RBP21.81■■□□□ 1.08
PDXDC1-204ENST00000455313 NLRP2Q9NX02 1062 aa21.81■■□□□ 1.08
PDXDC1-204ENST00000455313 RCAN3Q9UKA8 241 aa21.81■■□□□ 1.08
PDXDC1-204ENST00000455313 MYH16Q9H6N6 1097 aa21.81■■□□□ 1.08
PDXDC1-204ENST00000455313 COL14A1Q05707 1796 aaKnown RBP21.8■■□□□ 1.08
PDXDC1-204ENST00000455313 WDR17Q8IZU2 1322 aa21.79■■□□□ 1.08
PDXDC1-204ENST00000455313 DCTN1Q14203 1278 aa21.78■■□□□ 1.08
PDXDC1-204ENST00000455313 FANCIQ9NVI1 1328 aa21.78■■□□□ 1.08
PDXDC1-204ENST00000455313 CALD1Q05682 793 aaKnown RBP21.78■■□□□ 1.08
PDXDC1-204ENST00000455313 TSR2Q969E8 191 aaKnown RBP21.77■■□□□ 1.08
PDXDC1-204ENST00000455313 RNF123Q5XPI4 1314 aa21.76■■□□□ 1.07
PDXDC1-204ENST00000455313 NEFLP07196 543 aa21.76■■□□□ 1.07
PDXDC1-204ENST00000455313 MCM10Q7L590 875 aa21.75■■□□□ 1.07
PDXDC1-204ENST00000455313 MAP3K5Q99683 1374 aa21.75■■□□□ 1.07
PDXDC1-204ENST00000455313 MEGF6O75095 1541 aa21.75■■□□□ 1.07
PDXDC1-204ENST00000455313 LRRC37A3O60309 1634 aa21.75■■□□□ 1.07
PDXDC1-204ENST00000455313 RTF1Q92541 710 aaKnown RBP21.74■■□□□ 1.07
PDXDC1-204ENST00000455313 IFT57Q9NWB7 429 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms