RNA–Protein interactions for RNA: ENST00000455302.5

LSMEM1-203, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 2

Gene LSMEM1, Length 819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-203ENST00000455302 COG6Q9Y2V7 657 aa10.74□□□□□ -0.69
LSMEM1-203ENST00000455302 NPHP4O75161 1426 aaPredicted RBP10.74□□□□□ -0.69
LSMEM1-203ENST00000455302 NUTM2BA6NNL0 878 aaPredicted RBP10.73□□□□□ -0.69
LSMEM1-203ENST00000455302 NUTM2EB1AL46 878 aaPredicted RBP10.73□□□□□ -0.69
LSMEM1-203ENST00000455302 LILRB3O75022 631 aa10.73□□□□□ -0.69
LSMEM1-203ENST00000455302 CSPP1Q1MSJ5 1256 aa10.73□□□□□ -0.69
LSMEM1-203ENST00000455302 PROX2Q3B8N5 592 aa10.73□□□□□ -0.69
LSMEM1-203ENST00000455302 NUTM2DQ5VT03 806 aaPredicted RBP10.73□□□□□ -0.69
LSMEM1-203ENST00000455302 NUTM2AQ8IVF1 878 aaPredicted RBP10.73□□□□□ -0.69
LSMEM1-203ENST00000455302 THEMISQ8N1K5 641 aaPredicted RBP10.73□□□□□ -0.69
LSMEM1-203ENST00000455302 CCDC82Q8N4S0 544 aa10.73□□□□□ -0.69
LSMEM1-203ENST00000455302 KIAA1107Q9UPP5 1409 aa10.73□□□□□ -0.69
LSMEM1-203ENST00000455302 PLEKHH2Q8IVE3 1493 aa10.73□□□□□ -0.69
LSMEM1-203ENST00000455302 VWDEQ8N2E2 1590 aa10.73□□□□□ -0.69
LSMEM1-203ENST00000455302 ALKQ9UM73 1620 aa10.73□□□□□ -0.69
LSMEM1-203ENST00000455302 C3orf80F5H4A9 247 aa10.72□□□□□ -0.69
LSMEM1-203ENST00000455302 SMAPO00193 183 aa10.72□□□□□ -0.69
LSMEM1-203ENST00000455302 CCDC97Q96F63 343 aaPredicted RBP10.72□□□□□ -0.69
LSMEM1-203ENST00000455302 CASKIN1Q8WXD9 1431 aa10.72□□□□□ -0.69
LSMEM1-203ENST00000455302 GPATCH8Q9UKJ3 1502 aaKnown RBP10.72□□□□□ -0.69
LSMEM1-203ENST00000455302 INO80Q9ULG1 1556 aaPredicted RBP10.72□□□□□ -0.69
LSMEM1-203ENST00000455302 NDUFV2P19404 249 aa10.71□□□□□ -0.69
LSMEM1-203ENST00000455302 GCGRP47871 477 aa10.71□□□□□ -0.69
LSMEM1-203ENST00000455302 ZBED2Q9BTP6 218 aa10.71□□□□□ -0.69
LSMEM1-203ENST00000455302 ZNF330Q9Y3S2 320 aaPredicted RBP10.71□□□□□ -0.69
LSMEM1-203ENST00000455302 POLR1AO95602 1720 aaPredicted RBP10.7□□□□□ -0.7
LSMEM1-203ENST00000455302 CDC42BPAQ5VT25 1732 aa10.7□□□□□ -0.7
LSMEM1-203ENST00000455302 LRRIQ1Q96JM4 1722 aa10.7□□□□□ -0.7
LSMEM1-203ENST00000455302 FAM135AQ9P2D6 1515 aa10.7□□□□□ -0.7
LSMEM1-203ENST00000455302 SLC4A5Q9BY07 1137 aa10.7□□□□□ -0.7
LSMEM1-203ENST00000455302 ZBTB3Q9H5J0 574 aa10.7□□□□□ -0.7
LSMEM1-203ENST00000455302 RABGEF1Q9UJ41 708 aa10.7□□□□□ -0.7
LSMEM1-203ENST00000455302 LRRC7Q96NW7 1537 aa10.69□□□□□ -0.7
LSMEM1-203ENST00000455302 PZPP20742 1482 aa10.69□□□□□ -0.7
LSMEM1-203ENST00000455302 CCNB3Q8WWL7 1395 aa10.69□□□□□ -0.7
LSMEM1-203ENST00000455302 WASHC2CQ9Y4E1 1318 aa10.69□□□□□ -0.7
LSMEM1-203ENST00000455302 KIF3BO15066 747 aa10.69□□□□□ -0.7
LSMEM1-203ENST00000455302 AP1G2O75843 785 aa10.69□□□□□ -0.7
LSMEM1-203ENST00000455302 MED14O60244 1454 aa10.68□□□□□ -0.7
LSMEM1-203ENST00000455302 ARHGAP33O14559 1287 aa10.68□□□□□ -0.7
LSMEM1-203ENST00000455302 GRIPAP1Q4V328 841 aa10.68□□□□□ -0.7
LSMEM1-203ENST00000455302 POTEAQ6S8J7 498 aa10.68□□□□□ -0.7
LSMEM1-203ENST00000455302 PCDHB15Q9Y5E8 787 aa10.68□□□□□ -0.7
LSMEM1-203ENST00000455302 RNF17Q9BXT8 1623 aaKnown RBP10.68□□□□□ -0.7
LSMEM1-203ENST00000455302 UGGT1Q9NYU2 1555 aa10.68□□□□□ -0.7
LSMEM1-203ENST00000455302 NLRP1Q9C000 1473 aa10.68□□□□□ -0.7
LSMEM1-203ENST00000455302 MIA2Q96PC5 1412 aa10.67□□□□□ -0.7
LSMEM1-203ENST00000455302 DHX29Q7Z478 1369 aaKnown RBP10.67□□□□□ -0.7
LSMEM1-203ENST00000455302 FDX1P10109 184 aa10.67□□□□□ -0.7
LSMEM1-203ENST00000455302 QPCTQ16769 361 aa10.67□□□□□ -0.7
LSMEM1-203ENST00000455302 MTMR14Q8NCE2 650 aa10.67□□□□□ -0.7
LSMEM1-203ENST00000455302 KDM5DQ9BY66 1539 aa10.67□□□□□ -0.7
LSMEM1-203ENST00000455302 HOXA2O43364 376 aa10.66□□□□□ -0.7
LSMEM1-203ENST00000455302 ERBB3P21860 1342 aa10.65□□□□□ -0.7
LSMEM1-203ENST00000455302 ZNF644Q9H582 1327 aaPredicted RBP10.65□□□□□ -0.7
LSMEM1-203ENST00000455302 PDIA4P13667 645 aaKnown RBP10.65□□□□□ -0.7
LSMEM1-203ENST00000455302 RTL5Q5HYW3 569 aaPredicted RBP10.65□□□□□ -0.7
LSMEM1-203ENST00000455302 SWT1Q5T5J6 900 aaKnown RBP10.65□□□□□ -0.7
LSMEM1-203ENST00000455302 SLF2Q8IX21 1173 aa10.65□□□□□ -0.7
LSMEM1-203ENST00000455302 GDPD2Q9HCC8 539 aa10.65□□□□□ -0.7
LSMEM1-203ENST00000455302 FYCO1Q9BQS8 1478 aa10.65□□□□□ -0.7
LSMEM1-203ENST00000455302 ADGBQ8N7X0 1667 aa10.65□□□□□ -0.7
LSMEM1-203ENST00000455302 DEPDC5O75140 1603 aa10.65□□□□□ -0.7
LSMEM1-203ENST00000455302 SYNMO15061 1565 aa10.65□□□□□ -0.71
LSMEM1-203ENST00000455302 PBX2P40425 430 aa10.64□□□□□ -0.71
LSMEM1-203ENST00000455302 RTEL1-TNFRSF6BF6WH68 1400 aa10.64□□□□□ -0.71
LSMEM1-203ENST00000455302 IQGAP1P46940 1657 aa10.63□□□□□ -0.71
LSMEM1-203ENST00000455302 HRCP23327 699 aa10.63□□□□□ -0.71
LSMEM1-203ENST00000455302 PSEN2P49810 448 aa10.63□□□□□ -0.71
LSMEM1-203ENST00000455302 FAM98CQ17RN3 349 aaKnown RBP10.63□□□□□ -0.71
LSMEM1-203ENST00000455302 CDAN1Q8IWY9 1227 aa10.63□□□□□ -0.71
LSMEM1-203ENST00000455302 PLSCR2Q9NRY7 297 aa10.63□□□□□ -0.71
LSMEM1-203ENST00000455302 MTUS2Q5JR59 1369 aa10.63□□□□□ -0.71
LSMEM1-203ENST00000455302 USP17L8P0C7I0 530 aa10.62□□□□□ -0.71
LSMEM1-203ENST00000455302 CABLES1Q8TDN4 633 aa10.62□□□□□ -0.71
LSMEM1-203ENST00000455302 MBD5Q9P267 1494 aa10.61□□□□□ -0.71
LSMEM1-203ENST00000455302 SLC10A3P09131 477 aa10.61□□□□□ -0.71
LSMEM1-203ENST00000455302 ABL2P42684 1182 aa10.61□□□□□ -0.71
LSMEM1-203ENST00000455302 EMP3P54852 163 aa10.61□□□□□ -0.71
LSMEM1-203ENST00000455302 MTMR2Q13614 643 aa10.61□□□□□ -0.71
LSMEM1-203ENST00000455302 LAPTM4BQ86VI4 370 aa10.61□□□□□ -0.71
LSMEM1-203ENST00000455302 HELBQ8NG08 1087 aaPredicted RBP10.61□□□□□ -0.71
LSMEM1-203ENST00000455302 NECTIN2Q92692 538 aa10.61□□□□□ -0.71
LSMEM1-203ENST00000455302 MARVELD3Q96A59 401 aa10.61□□□□□ -0.71
LSMEM1-203ENST00000455302 FAM135BQ49AJ0 1406 aa10.6□□□□□ -0.71
LSMEM1-203ENST00000455302 VARS2Q5ST30 1063 aaKnown RBP10.6□□□□□ -0.71
LSMEM1-203ENST00000455302 NBPF3Q9H094 633 aa10.6□□□□□ -0.71
LSMEM1-203ENST00000455302 PODXL2Q9NZ53 605 aa10.6□□□□□ -0.71
LSMEM1-203ENST00000455302 NDUFB9Q9Y6M9 179 aa10.6□□□□□ -0.71
LSMEM1-203ENST00000455302 SEPT9Q9UHD8 586 aaPredicted RBP10.59□□□□□ -0.71
LSMEM1-203ENST00000455302 STRCP1A6NGW2 1772 aa10.59□□□□□ -0.71
LSMEM1-203ENST00000455302 SCAF11Q99590 1463 aaKnown RBP10.58□□□□□ -0.72
LSMEM1-203ENST00000455302 TXNDC2Q86VQ3 553 aa10.58□□□□□ -0.72
LSMEM1-203ENST00000455302 CCDC141Q6ZP82 1450 aa10.57□□□□□ -0.72
LSMEM1-203ENST00000455302 WASHC4Q2M389 1173 aa10.57□□□□□ -0.72
LSMEM1-203ENST00000455302 CALR3Q96L12 384 aaKnown RBP10.57□□□□□ -0.72
LSMEM1-203ENST00000455302 PCDHGC3Q9UN70 934 aa10.57□□□□□ -0.72
LSMEM1-203ENST00000455302 TBC1D2BQ9UPU7 963 aa10.57□□□□□ -0.72
LSMEM1-203ENST00000455302 EID1Q9Y6B2 187 aa10.57□□□□□ -0.72
LSMEM1-203ENST00000455302 LTKP29376 864 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms