RNA–Protein interactions for RNA: ENST00000454913.5

NELFE-207, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-207ENST00000454913 MTFR1LQ9H019 292 aa22.96■■□□□ 1.27
NELFE-207ENST00000454913 SLC15A2Q16348 729 aa22.95■■□□□ 1.26
NELFE-207ENST00000454913 TOM1L2Q6ZVM7 507 aa22.95■■□□□ 1.26
NELFE-207ENST00000454913 CCDC61Q9Y6R9 512 aa22.95■■□□□ 1.26
NELFE-207ENST00000454913 GIGYF1O75420 1035 aaPredicted RBP22.94■■□□□ 1.26
NELFE-207ENST00000454913 TXNRD1Q16881 649 aa22.94■■□□□ 1.26
NELFE-207ENST00000454913 DCAF11Q8TEB1 546 aa22.94■■□□□ 1.26
NELFE-207ENST00000454913 PLEKHG3A1L390 1219 aa22.91■■□□□ 1.26
NELFE-207ENST00000454913 MARCH10Q8NA82 808 aaPredicted RBP22.91■■□□□ 1.26
NELFE-207ENST00000454913 ARXQ96QS3 562 aa22.91■■□□□ 1.26
NELFE-207ENST00000454913 GPR162Q16538 588 aa22.9■■□□□ 1.26
NELFE-207ENST00000454913 SGIP1Q9BQI5 828 aa22.89■■□□□ 1.25
NELFE-207ENST00000454913 AATKQ6ZMQ8 1374 aa22.88■■□□□ 1.25
NELFE-207ENST00000454913 BCL9O00512 1426 aa22.86■■□□□ 1.25
NELFE-207ENST00000454913 CDCA7Q9BWT1 371 aaPredicted RBP22.86■■□□□ 1.25
NELFE-207ENST00000454913 PPIP5K1Q6PFW1 1433 aa22.85■■□□□ 1.25
NELFE-207ENST00000454913 KLHL34Q8N239 644 aa22.85■■□□□ 1.25
NELFE-207ENST00000454913 WDR17Q8IZU2 1322 aa22.84■■□□□ 1.25
NELFE-207ENST00000454913 NLRP6P59044 892 aa22.84■■□□□ 1.25
NELFE-207ENST00000454913 PELP1Q8IZL8 1130 aaKnown RBP22.84■■□□□ 1.25
NELFE-207ENST00000454913 SRPK2P78362 688 aaKnown RBP22.83■■□□□ 1.25
NELFE-207ENST00000454913 MAP3K5Q99683 1374 aa22.83■■□□□ 1.25
NELFE-207ENST00000454913 COL18A1P39060 1754 aa22.83■■□□□ 1.24
NELFE-207ENST00000454913 RGPD5Q99666 1765 aa22.83■■□□□ 1.24
NELFE-207ENST00000454913 CSB-PGBD3P0DP91 1061 aa22.82■■□□□ 1.24
NELFE-207ENST00000454913 SLIT3O75094 1523 aa22.82■■□□□ 1.24
NELFE-207ENST00000454913 EXOC5O00471 708 aa22.81■■□□□ 1.24
NELFE-207ENST00000454913 STAC3Q96MF2 364 aa22.81■■□□□ 1.24
NELFE-207ENST00000454913 NHSQ6T4R5 1651 aa22.81■■□□□ 1.24
NELFE-207ENST00000454913 CEP350Q5VT06 3117 aa22.8■■□□□ 1.24
NELFE-207ENST00000454913 BRD4O60885 1362 aaPredicted RBP22.79■■□□□ 1.24
NELFE-207ENST00000454913 AXIN2Q9Y2T1 843 aa22.79■■□□□ 1.24
NELFE-207ENST00000454913 SHANK3Q9BYB0 1731 aa22.77■■□□□ 1.24
NELFE-207ENST00000454913 CPSF1Q10570 1443 aaKnown RBP22.77■■□□□ 1.24
NELFE-207ENST00000454913 ACSBG1Q96GR2 724 aa22.77■■□□□ 1.24
NELFE-207ENST00000454913 PAPPAQ13219 1627 aa22.77■■□□□ 1.24
NELFE-207ENST00000454913 USP6P35125 1406 aa22.76■■□□□ 1.23
NELFE-207ENST00000454913 CARD10Q9BWT7 1032 aa22.76■■□□□ 1.23
NELFE-207ENST00000454913 CABP2Q9NPB3 220 aa22.76■■□□□ 1.23
NELFE-207ENST00000454913 PIK3C2AO00443 1686 aa22.76■■□□□ 1.23
NELFE-207ENST00000454913 KAT6BQ8WYB5 2073 aa22.75■■□□□ 1.23
NELFE-207ENST00000454913 TNS2Q63HR2 1409 aa22.74■■□□□ 1.23
NELFE-207ENST00000454913 SOX12O15370 315 aa22.74■■□□□ 1.23
NELFE-207ENST00000454913 QRICH2Q9H0J4 1663 aa22.74■■□□□ 1.23
NELFE-207ENST00000454913 BTAF1O14981 1849 aa22.73■■□□□ 1.23
NELFE-207ENST00000454913 GOLGB1Q14789 3259 aaKnown RBP22.73■■□□□ 1.23
NELFE-207ENST00000454913 POLD1P28340 1107 aa22.73■■□□□ 1.23
NELFE-207ENST00000454913 ZNF827Q17R98 1081 aa22.72■■□□□ 1.23
NELFE-207ENST00000454913 CABP1Q9NZU7 370 aa22.71■■□□□ 1.23
NELFE-207ENST00000454913 CCDC7Q96M83 1385 aa22.71■■□□□ 1.23
NELFE-207ENST00000454913 TRPM1Q7Z4N2 1603 aa22.71■■□□□ 1.23
NELFE-207ENST00000454913 KIAA1210Q9ULL0 1709 aa22.71■■□□□ 1.23
NELFE-207ENST00000454913 RAB3GAP2Q9H2M9 1393 aa22.69■■□□□ 1.22
NELFE-207ENST00000454913 ARHGEF25Q86VW2 580 aa22.69■■□□□ 1.22
NELFE-207ENST00000454913 KCNH5Q8NCM2 988 aa22.68■■□□□ 1.22
NELFE-207ENST00000454913 SLC16A10Q8TF71 515 aa22.68■■□□□ 1.22
NELFE-207ENST00000454913 QSER1Q2KHR3 1735 aa22.68■■□□□ 1.22
NELFE-207ENST00000454913 ABCC6O95255 1503 aa22.67■■□□□ 1.22
NELFE-207ENST00000454913 CENPJQ9HC77 1338 aaPredicted RBP22.67■■□□□ 1.22
NELFE-207ENST00000454913 NLGN2Q8NFZ4 835 aa22.66■■□□□ 1.22
NELFE-207ENST00000454913 LRRC4BQ9NT99 713 aa22.66■■□□□ 1.22
NELFE-207ENST00000454913 GRIN3BO60391 1043 aa22.64■■□□□ 1.21
NELFE-207ENST00000454913 COL24A1Q17RW2 1714 aa22.64■■□□□ 1.21
NELFE-207ENST00000454913 TUBGCP6Q96RT7 1819 aa22.63■■□□□ 1.21
NELFE-207ENST00000454913 NBPF1Q3BBV0 1214 aa22.62■■□□□ 1.21
NELFE-207ENST00000454913 AKT1S1Q96B36 256 aa22.62■■□□□ 1.21
NELFE-207ENST00000454913 ATP10DQ9P241 1426 aa22.62■■□□□ 1.21
NELFE-207ENST00000454913 YBX3P16989 372 aaKnown RBP eCLIP22.61■■□□□ 1.214e-7■□□□□ 9.7
NELFE-207ENST00000454913 TFCP2L1Q9NZI6 479 aa22.61■■□□□ 1.21
NELFE-207ENST00000454913 PNPLA7Q6ZV29 1317 aa22.6■■□□□ 1.21
NELFE-207ENST00000454913 NLRP2Q9NX02 1062 aa22.6■■□□□ 1.21
NELFE-207ENST00000454913 TTC21BQ7Z4L5 1316 aa22.59■■□□□ 1.21
NELFE-207ENST00000454913 NFAT5O94916 1531 aa22.59■■□□□ 1.21
NELFE-207ENST00000454913 IL2RBP14784 551 aa22.59■■□□□ 1.21
NELFE-207ENST00000454913 GPBP1L1Q9HC44 474 aaPredicted RBP22.59■■□□□ 1.21
NELFE-207ENST00000454913 SLC27A3Q5K4L6 730 aa22.58■■□□□ 1.21
NELFE-207ENST00000454913 HSPA6P17066 643 aa22.57■■□□□ 1.2
NELFE-207ENST00000454913 TTC21AQ8NDW8 1320 aa22.56■■□□□ 1.2
NELFE-207ENST00000454913 MSH5O43196 834 aa22.55■■□□□ 1.2
NELFE-207ENST00000454913 ZNF526Q8TF50 670 aaPredicted RBP22.55■■□□□ 1.2
NELFE-207ENST00000454913 ZNF692Q9BU19 519 aaPredicted RBP22.55■■□□□ 1.2
NELFE-207ENST00000454913 ERBB3P21860 1342 aa22.55■■□□□ 1.2
NELFE-207ENST00000454913 LTN1O94822 1766 aa22.54■■□□□ 1.2
NELFE-207ENST00000454913 KCNQ4P56696 695 aa22.54■■□□□ 1.2
NELFE-207ENST00000454913 EVC2Q86UK5 1308 aa22.54■■□□□ 1.2
NELFE-207ENST00000454913 SYTL4Q96C24 671 aaPredicted RBP22.52■■□□□ 1.2
NELFE-207ENST00000454913 DDX54Q8TDD1 881 aaKnown RBP22.51■■□□□ 1.19
NELFE-207ENST00000454913 KTN1Q86UP2 1357 aaKnown RBP22.5■■□□□ 1.19
NELFE-207ENST00000454913 LY75O60449 1722 aa22.49■■□□□ 1.19
NELFE-207ENST00000454913 ANKRD24Q8TF21 1146 aa22.48■■□□□ 1.19
NELFE-207ENST00000454913 DOT1LQ8TEK3 1739 aa22.48■■□□□ 1.19
NELFE-207ENST00000454913 MSL1Q68DK7 614 aa22.47■■□□□ 1.19
NELFE-207ENST00000454913 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.46■■□□□ 1.19
NELFE-207ENST00000454913 MON2Q7Z3U7 1717 aa22.45■■□□□ 1.19
NELFE-207ENST00000454913 ADCY9O60503 1353 aa22.44■■□□□ 1.18
NELFE-207ENST00000454913 PRIM1P49642 420 aaKnown RBP22.44■■□□□ 1.18
NELFE-207ENST00000454913 COL23A1Q86Y22 540 aaPredicted RBP22.43■■□□□ 1.18
NELFE-207ENST00000454913 CCNL1Q9UK58 526 aaPredicted RBP22.43■■□□□ 1.18
NELFE-207ENST00000454913 ANKRD36BQ8N2N9 1353 aa22.41■■□□□ 1.18
NELFE-207ENST00000454913 USP54Q70EL1 1684 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms