RNA–Protein interactions for RNA: ENST00000454716.1

RPS3AP53-201, Transcript of ribosomal protein S3a pseudogene 53, humanhuman

BASIC

Gene RPS3AP53, Length 778 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP53-201ENST00000454716 TREML4Q6UXN2 200 aa11.6□□□□□ -0.55
RPS3AP53-201ENST00000454716 CCDC116Q8IYX3 515 aa11.6□□□□□ -0.55
RPS3AP53-201ENST00000454716 BANK1Q8NDB2 785 aa11.6□□□□□ -0.55
RPS3AP53-201ENST00000454716 PGPEP1Q9NXJ5 209 aa11.6□□□□□ -0.55
RPS3AP53-201ENST00000454716 NBPF20Q3BBV1 942 aa11.59□□□□□ -0.55
RPS3AP53-201ENST00000454716 HMX1Q9NP08 348 aaPredicted RBP11.59□□□□□ -0.55
RPS3AP53-201ENST00000454716 ITPKCQ96DU7 683 aa11.58□□□□□ -0.56
RPS3AP53-201ENST00000454716 ZFP42Q96MM3 310 aa11.57□□□□□ -0.56
RPS3AP53-201ENST00000454716 KCTD15Q96SI1 283 aaPredicted RBP11.57□□□□□ -0.56
RPS3AP53-201ENST00000454716 SOCS7O14512 581 aa11.56□□□□□ -0.56
RPS3AP53-201ENST00000454716 ADAM32Q8TC27 787 aa11.56□□□□□ -0.56
RPS3AP53-201ENST00000454716 ZNF592Q92610 1267 aa11.56□□□□□ -0.56
RPS3AP53-201ENST00000454716 ZFAND3Q9H8U3 227 aa11.56□□□□□ -0.56
RPS3AP53-201ENST00000454716 WFS1O76024 890 aa11.55□□□□□ -0.56
RPS3AP53-201ENST00000454716 DZIP3Q86Y13 1208 aaKnown RBP11.55□□□□□ -0.56
RPS3AP53-201ENST00000454716 EPS8L1Q8TE68 723 aa11.55□□□□□ -0.56
RPS3AP53-201ENST00000454716 SLC16A10Q8TF71 515 aa11.54□□□□□ -0.56
RPS3AP53-201ENST00000454716 PURBQ96QR8 312 aaKnown RBP11.54□□□□□ -0.56
RPS3AP53-201ENST00000454716 TERTO14746 1132 aaKnown RBP11.53□□□□□ -0.56
RPS3AP53-201ENST00000454716 NPAS3Q8IXF0 933 aa11.53□□□□□ -0.56
RPS3AP53-201ENST00000454716 MEIOBQ8N635 442 aa11.53□□□□□ -0.56
RPS3AP53-201ENST00000454716 TSEN34Q9BSV6 310 aaKnown RBP11.53□□□□□ -0.56
RPS3AP53-201ENST00000454716 PPP1R26Q5T8A7 1209 aaPredicted RBP11.52□□□□□ -0.57
RPS3AP53-201ENST00000454716 TRIM34Q9BYJ4 488 aa11.52□□□□□ -0.57
RPS3AP53-201ENST00000454716 ZBBXA8MT70 800 aa11.51□□□□□ -0.57
RPS3AP53-201ENST00000454716 NXF1Q9UBU9 619 aaKnown RBP11.51□□□□□ -0.57
RPS3AP53-201ENST00000454716 BMP2P12643 396 aa11.5□□□□□ -0.57
RPS3AP53-201ENST00000454716 MCCD1P59942 119 aaPredicted RBP11.5□□□□□ -0.57
RPS3AP53-201ENST00000454716 CCDC125Q86Z20 511 aa11.5□□□□□ -0.57
RPS3AP53-201ENST00000454716 LINC00528Q8N1L1 170 aa11.5□□□□□ -0.57
RPS3AP53-201ENST00000454716 OCSTAMPQ9BR26 566 aa11.5□□□□□ -0.57
RPS3AP53-201ENST00000454716 ZNF330Q9Y3S2 320 aaPredicted RBP11.5□□□□□ -0.57
RPS3AP53-201ENST00000454716 PRM3Q9NNZ6 103 aa11.49□□□□□ -0.57
RPS3AP53-201ENST00000454716 NFX1Q12986 1120 aaKnown RBP11.48□□□□□ -0.57
RPS3AP53-201ENST00000454716 C6orf118Q5T5N4 469 aa11.48□□□□□ -0.57
RPS3AP53-201ENST00000454716 SEPT12Q8IYM1 358 aa11.48□□□□□ -0.57
RPS3AP53-201ENST00000454716 GJD4Q96KN9 370 aaPredicted RBP11.48□□□□□ -0.57
RPS3AP53-201ENST00000454716 NDUFB9Q9Y6M9 179 aa11.48□□□□□ -0.57
RPS3AP53-201ENST00000454716 CCDC180Q9P1Z9 1646 aa11.47□□□□□ -0.57
RPS3AP53-201ENST00000454716 MAN1A2O60476 641 aa11.47□□□□□ -0.57
RPS3AP53-201ENST00000454716 INTS6LQ5JSJ4 861 aaKnown RBP11.47□□□□□ -0.57
RPS3AP53-201ENST00000454716 Q6ZVU0 165 aa11.46□□□□□ -0.57
RPS3AP53-201ENST00000454716 LCE2AQ5TA79 106 aaPredicted RBP11.45□□□□□ -0.58
RPS3AP53-201ENST00000454716 IRF7Q92985 503 aa11.43□□□□□ -0.58
RPS3AP53-201ENST00000454716 PCDHB9Q9Y5E1 797 aa11.43□□□□□ -0.58
RPS3AP53-201ENST00000454716 ESPNB1AK53 854 aa11.42□□□□□ -0.58
RPS3AP53-201ENST00000454716 NR1H3Q13133 447 aa11.42□□□□□ -0.58
RPS3AP53-201ENST00000454716 RNF20Q5VTR2 975 aa11.42□□□□□ -0.58
RPS3AP53-201ENST00000454716 FBXO45P0C2W1 286 aa11.41□□□□□ -0.58
RPS3AP53-201ENST00000454716 MTMR14Q8NCE2 650 aa11.41□□□□□ -0.58
RPS3AP53-201ENST00000454716 SOS2Q07890 1332 aaPredicted RBP11.4□□□□□ -0.58
RPS3AP53-201ENST00000454716 WIPF1O43516 503 aa11.4□□□□□ -0.58
RPS3AP53-201ENST00000454716 RAB15P59190 212 aa11.4□□□□□ -0.58
RPS3AP53-201ENST00000454716 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.4□□□□□ -0.58
RPS3AP53-201ENST00000454716 TTLL8A6PVC2 850 aa11.39□□□□□ -0.59
RPS3AP53-201ENST00000454716 H3BM21 787 aa11.39□□□□□ -0.59
RPS3AP53-201ENST00000454716 INSM1Q01101 510 aaPredicted RBP11.39□□□□□ -0.59
RPS3AP53-201ENST00000454716 CBLBQ13191 982 aa11.39□□□□□ -0.59
RPS3AP53-201ENST00000454716 ERVH48-1M5A8F1 160 aa11.38□□□□□ -0.59
RPS3AP53-201ENST00000454716 SPINT1O43278 529 aa11.38□□□□□ -0.59
RPS3AP53-201ENST00000454716 ZNF784Q8NCA9 323 aaPredicted RBP11.37□□□□□ -0.59
RPS3AP53-201ENST00000454716 SNRKQ9NRH2 765 aa11.37□□□□□ -0.59
RPS3AP53-201ENST00000454716 ADH1AP07327 375 aa11.35□□□□□ -0.59
RPS3AP53-201ENST00000454716 PRKCSHP14314 528 aaPredicted RBP11.35□□□□□ -0.59
RPS3AP53-201ENST00000454716 TMPRSS4Q9NRS4 437 aa11.35□□□□□ -0.59
RPS3AP53-201ENST00000454716 SOBPA7XYQ1 873 aa11.34□□□□□ -0.59
RPS3AP53-201ENST00000454716 DNMT3LQ9UJW3 386 aa11.34□□□□□ -0.59
RPS3AP53-201ENST00000454716 RELBQ01201 579 aa11.33□□□□□ -0.6
RPS3AP53-201ENST00000454716 ESF1Q9H501 851 aaKnown RBP11.33□□□□□ -0.6
RPS3AP53-201ENST00000454716 GIGYF1O75420 1035 aaPredicted RBP11.32□□□□□ -0.6
RPS3AP53-201ENST00000454716 LILRA1O75019 489 aa11.31□□□□□ -0.6
RPS3AP53-201ENST00000454716 PTGIRP43119 386 aa11.31□□□□□ -0.6
RPS3AP53-201ENST00000454716 AGBL1Q96MI9 1066 aa11.31□□□□□ -0.6
RPS3AP53-201ENST00000454716 POLMQ9NP87 494 aaPredicted RBP11.31□□□□□ -0.6
RPS3AP53-201ENST00000454716 VEGFBP49765 207 aa11.3□□□□□ -0.6
RPS3AP53-201ENST00000454716 EIF4G2P78344 907 aaKnown RBP eCLIP11.3□□□□□ -0.6
RPS3AP53-201ENST00000454716 CYLDQ9NQC7 956 aa11.3□□□□□ -0.6
RPS3AP53-201ENST00000454716 VSIG8P0DPA2 414 aa11.29□□□□□ -0.6
RPS3AP53-201ENST00000454716 FIGNL2A6NMB9 653 aa11.28□□□□□ -0.6
RPS3AP53-201ENST00000454716 PPFIA3O75145 1194 aa11.28□□□□□ -0.6
RPS3AP53-201ENST00000454716 CC2D2BQ6DHV5 1058 aa11.28□□□□□ -0.6
RPS3AP53-201ENST00000454716 INSM2Q96T92 566 aaPredicted RBP11.28□□□□□ -0.6
RPS3AP53-201ENST00000454716 STK17AQ9UEE5 414 aa11.28□□□□□ -0.6
RPS3AP53-201ENST00000454716 ATP5J2-PTCD1G3V325 749 aa11.27□□□□□ -0.61
RPS3AP53-201ENST00000454716 ZNF395Q9H8N7 513 aaPredicted RBP11.27□□□□□ -0.61
RPS3AP53-201ENST00000454716 TBC1D2BQ9UPU7 963 aa11.27□□□□□ -0.61
RPS3AP53-201ENST00000454716 FAM181BA6NEQ2 426 aa11.26□□□□□ -0.61
RPS3AP53-201ENST00000454716 GPR37L1O60883 481 aa11.26□□□□□ -0.61
RPS3AP53-201ENST00000454716 ADD1P35611 737 aaKnown RBP11.26□□□□□ -0.61
RPS3AP53-201ENST00000454716 GMPRP36959 345 aa11.26□□□□□ -0.61
RPS3AP53-201ENST00000454716 CTSOP43234 321 aaPredicted RBP11.26□□□□□ -0.61
RPS3AP53-201ENST00000454716 ERVK-9P63128 1117 aa11.26□□□□□ -0.61
RPS3AP53-201ENST00000454716 PTSQ03393 145 aa11.26□□□□□ -0.61
RPS3AP53-201ENST00000454716 CYP2U1Q7Z449 544 aa11.26□□□□□ -0.61
RPS3AP53-201ENST00000454716 PCDHB11Q9Y5F2 797 aa11.25□□□□□ -0.61
RPS3AP53-201ENST00000454716 WASHC4Q2M389 1173 aa11.24□□□□□ -0.61
RPS3AP53-201ENST00000454716 LCE2CQ5TA81 110 aa11.24□□□□□ -0.61
RPS3AP53-201ENST00000454716 RNF217Q8TC41 542 aa11.24□□□□□ -0.61
RPS3AP53-201ENST00000454716 CEP126Q9P2H0 1117 aa11.23□□□□□ -0.61
RPS3AP53-201ENST00000454716 ERBB4Q15303 1308 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms