RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 RREB1Q92766 1687 aa33.87■■■■□ 3.01
LYSMD2-202ENST00000454181 PIK3C2AO00443 1686 aa33.87■■■■□ 3.01
LYSMD2-202ENST00000454181 CPSF1Q10570 1443 aaKnown RBP33.86■■■■□ 3.01
LYSMD2-202ENST00000454181 PPP1R1BQ9UD71 204 aaPredicted RBP33.84■■■■□ 3.01
LYSMD2-202ENST00000454181 NUP188Q5SRE5 1749 aa33.84■■■■□ 3.01
LYSMD2-202ENST00000454181 KTN1Q86UP2 1357 aaKnown RBP33.84■■■■□ 3.01
LYSMD2-202ENST00000454181 PLSCR1O15162 318 aa33.83■■■■□ 3.01
LYSMD2-202ENST00000454181 BCL11BQ9C0K0 894 aaPredicted RBP33.83■■■■□ 3.01
LYSMD2-202ENST00000454181 SPON1Q9HCB6 807 aa33.83■■■■□ 3.01
LYSMD2-202ENST00000454181 CARD10Q9BWT7 1032 aa33.82■■■■□ 3
LYSMD2-202ENST00000454181 MARCH10Q8NA82 808 aaPredicted RBP33.79■■■■□ 3
LYSMD2-202ENST00000454181 LRRC37A3O60309 1634 aa33.79■■■■□ 3
LYSMD2-202ENST00000454181 COL18A1P39060 1754 aa33.78■■■■□ 3
LYSMD2-202ENST00000454181 EXOC5O00471 708 aa33.78■■■■□ 3
LYSMD2-202ENST00000454181 KCNQ2O43526 872 aa33.78■■■■□ 3
LYSMD2-202ENST00000454181 PEAK1Q9H792 1746 aa33.76■■■■□ 3
LYSMD2-202ENST00000454181 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.76■■■□□ 2.99
LYSMD2-202ENST00000454181 DCAF8L1A6NGE4 600 aa33.74■■■□□ 2.99
LYSMD2-202ENST00000454181 CARD11Q9BXL7 1154 aa33.74■■■□□ 2.99
LYSMD2-202ENST00000454181 AKAP12Q02952 1782 aa33.74■■■□□ 2.99
LYSMD2-202ENST00000454181 TMC1Q8TDI8 760 aa33.73■■■□□ 2.99
LYSMD2-202ENST00000454181 CCDC7Q96M83 1385 aa33.72■■■□□ 2.99
LYSMD2-202ENST00000454181 PTF1AQ7RTS3 328 aa33.72■■■□□ 2.99
LYSMD2-202ENST00000454181 HDGFL2Q7Z4V5 671 aaPredicted RBP33.7■■■□□ 2.99
LYSMD2-202ENST00000454181 BCL9O00512 1426 aa33.7■■■□□ 2.98
LYSMD2-202ENST00000454181 SBNO2Q9Y2G9 1366 aa33.69■■■□□ 2.98
LYSMD2-202ENST00000454181 SBF2Q86WG5 1849 aa33.68■■■□□ 2.98
LYSMD2-202ENST00000454181 NFAT5O94916 1531 aa33.68■■■□□ 2.98
LYSMD2-202ENST00000454181 RGPD3A6NKT7 1758 aaPredicted RBP33.67■■■□□ 2.98
LYSMD2-202ENST00000454181 RGPD4Q7Z3J3 1758 aa33.67■■■□□ 2.98
LYSMD2-202ENST00000454181 NME9Q86XW9 330 aa33.66■■■□□ 2.98
LYSMD2-202ENST00000454181 RGPD5Q99666 1765 aa33.66■■■□□ 2.98
LYSMD2-202ENST00000454181 ANO8Q9HCE9 1232 aaPredicted RBP33.66■■■□□ 2.98
LYSMD2-202ENST00000454181 NLRP2Q9NX02 1062 aa33.66■■■□□ 2.98
LYSMD2-202ENST00000454181 WNK3Q9BYP7 1800 aa33.65■■■□□ 2.98
LYSMD2-202ENST00000454181 USP31Q70CQ4 1352 aa33.65■■■□□ 2.98
LYSMD2-202ENST00000454181 PROM2Q8N271 834 aa33.64■■■□□ 2.98
LYSMD2-202ENST00000454181 TXNRD1Q16881 649 aa33.63■■■□□ 2.97
LYSMD2-202ENST00000454181 STK32BQ9NY57 414 aa33.63■■■□□ 2.97
LYSMD2-202ENST00000454181 ABCC6O95255 1503 aa33.63■■■□□ 2.97
LYSMD2-202ENST00000454181 NINLQ9Y2I6 1382 aa33.62■■■□□ 2.97
LYSMD2-202ENST00000454181 TERF2IPQ9NYB0 399 aa33.62■■■□□ 2.97
LYSMD2-202ENST00000454181 YY1P25490 414 aa33.61■■■□□ 2.97
LYSMD2-202ENST00000454181 SLC12A5Q9H2X9 1139 aa33.61■■■□□ 2.97
LYSMD2-202ENST00000454181 MON2Q7Z3U7 1717 aa33.6■■■□□ 2.97
LYSMD2-202ENST00000454181 ERBB3P21860 1342 aa33.59■■■□□ 2.97
LYSMD2-202ENST00000454181 TNS2Q63HR2 1409 aa33.59■■■□□ 2.97
LYSMD2-202ENST00000454181 TONSLQ96HA7 1378 aa33.59■■■□□ 2.97
LYSMD2-202ENST00000454181 IL2RBP14784 551 aa33.58■■■□□ 2.97
LYSMD2-202ENST00000454181 ZBTB7AO95365 584 aa33.57■■■□□ 2.96
LYSMD2-202ENST00000454181 ANKRD24Q8TF21 1146 aa33.56■■■□□ 2.96
LYSMD2-202ENST00000454181 ACSBG1Q96GR2 724 aa33.55■■■□□ 2.96
LYSMD2-202ENST00000454181 EDC4Q6P2E9 1401 aaKnown RBP33.54■■■□□ 2.96
LYSMD2-202ENST00000454181 SLC15A2Q16348 729 aa33.54■■■□□ 2.96
LYSMD2-202ENST00000454181 PDGFDQ9GZP0 370 aaPredicted RBP33.54■■■□□ 2.96
LYSMD2-202ENST00000454181 CD163L1Q9NR16 1453 aa33.54■■■□□ 2.96
LYSMD2-202ENST00000454181 PUS7Q96PZ0 661 aaKnown RBP33.52■■■□□ 2.96
LYSMD2-202ENST00000454181 ATF5Q9Y2D1 282 aaPredicted RBP33.52■■■□□ 2.96
LYSMD2-202ENST00000454181 A0A1W2PP64 1363 aa33.48■■■□□ 2.95
LYSMD2-202ENST00000454181 CASZ1Q86V15 1759 aa33.47■■■□□ 2.95
LYSMD2-202ENST00000454181 USP54Q70EL1 1684 aa33.47■■■□□ 2.95
LYSMD2-202ENST00000454181 LTN1O94822 1766 aa33.45■■■□□ 2.95
LYSMD2-202ENST00000454181 SLC24A1O60721 1099 aa33.45■■■□□ 2.95
LYSMD2-202ENST00000454181 IP6K1Q92551 441 aa33.45■■■□□ 2.95
LYSMD2-202ENST00000454181 LTV1Q96GA3 475 aaPredicted RBP33.45■■■□□ 2.95
LYSMD2-202ENST00000454181 PTGER2P43116 358 aa33.44■■■□□ 2.94
LYSMD2-202ENST00000454181 MTFR1LQ9H019 292 aa33.44■■■□□ 2.94
LYSMD2-202ENST00000454181 NHSQ6T4R5 1651 aa33.42■■■□□ 2.94
LYSMD2-202ENST00000454181 COG3Q96JB2 828 aa33.42■■■□□ 2.94
LYSMD2-202ENST00000454181 DDX54Q8TDD1 881 aaKnown RBP33.41■■■□□ 2.94
LYSMD2-202ENST00000454181 ST20-MTHFSA0A0A6YYL1 179 aa33.39■■■□□ 2.94
LYSMD2-202ENST00000454181 AMPHP49418 695 aa33.37■■■□□ 2.93
LYSMD2-202ENST00000454181 KAT6BQ8WYB5 2073 aa33.35■■■□□ 2.93
LYSMD2-202ENST00000454181 TESK2Q96S53 571 aa33.35■■■□□ 2.93
LYSMD2-202ENST00000454181 FHDC1Q9C0D6 1143 aaPredicted RBP33.35■■■□□ 2.93
LYSMD2-202ENST00000454181 SYT17Q9BSW7 474 aa33.34■■■□□ 2.93
LYSMD2-202ENST00000454181 MYOM1P52179 1685 aa33.33■■■□□ 2.93
LYSMD2-202ENST00000454181 SYTL4Q96C24 671 aaPredicted RBP33.32■■■□□ 2.92
LYSMD2-202ENST00000454181 MAP3K19Q56UN5 1328 aa33.31■■■□□ 2.92
LYSMD2-202ENST00000454181 HOXC9P31274 260 aa33.31■■■□□ 2.92
LYSMD2-202ENST00000454181 SLC27A3Q5K4L6 730 aa33.3■■■□□ 2.92
LYSMD2-202ENST00000454181 ARXQ96QS3 562 aa33.3■■■□□ 2.92
LYSMD2-202ENST00000454181 BTAF1O14981 1849 aa33.3■■■□□ 2.92
LYSMD2-202ENST00000454181 LRRC4BQ9NT99 713 aa33.29■■■□□ 2.92
LYSMD2-202ENST00000454181 ZNF827Q17R98 1081 aa33.28■■■□□ 2.92
LYSMD2-202ENST00000454181 SGIP1Q9BQI5 828 aa33.27■■■□□ 2.92
LYSMD2-202ENST00000454181 FBLN1P23142 703 aa33.26■■■□□ 2.91
LYSMD2-202ENST00000454181 ZCRB1Q8TBF4 217 aaKnown RBP33.26■■■□□ 2.91
LYSMD2-202ENST00000454181 FAM208AQ9UK61 1670 aaKnown RBP33.26■■■□□ 2.91
LYSMD2-202ENST00000454181 PRIM1P49642 420 aaKnown RBP33.25■■■□□ 2.91
LYSMD2-202ENST00000454181 ANKRD36BQ8N2N9 1353 aa33.24■■■□□ 2.91
LYSMD2-202ENST00000454181 TMF1P82094 1093 aa33.24■■■□□ 2.91
LYSMD2-202ENST00000454181 PAPPAQ13219 1627 aa33.22■■■□□ 2.91
LYSMD2-202ENST00000454181 SLC16A10Q8TF71 515 aa33.22■■■□□ 2.91
LYSMD2-202ENST00000454181 AKT1S1Q96B36 256 aa33.21■■■□□ 2.91
LYSMD2-202ENST00000454181 TFCP2L1Q9NZI6 479 aa33.21■■■□□ 2.91
LYSMD2-202ENST00000454181 POLD1P28340 1107 aa33.2■■■□□ 2.91
LYSMD2-202ENST00000454181 RRS1Q15050 365 aaKnown RBP33.19■■■□□ 2.9
LYSMD2-202ENST00000454181 GGNBP2Q9H3C7 697 aa33.19■■■□□ 2.9
LYSMD2-202ENST00000454181 RTL1A6NKG5 1358 aa33.19■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms