RNA–Protein interactions for RNA: ENST00000454137.5

MSH6-205, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 725 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-205ENST00000454137 LRRC7Q96NW7 1537 aa8.07□□□□□ -1.12
MSH6-205ENST00000454137 STRCP1A6NGW2 1772 aa8.07□□□□□ -1.12
MSH6-205ENST00000454137 PRR36Q9H6K5 1346 aa8.06□□□□□ -1.12
MSH6-205ENST00000454137 NLRP6P59044 892 aa8.06□□□□□ -1.12
MSH6-205ENST00000454137 IFNL1Q8IU54 200 aa8.06□□□□□ -1.12
MSH6-205ENST00000454137 AATKQ6ZMQ8 1374 aa8.06□□□□□ -1.12
MSH6-205ENST00000454137 TTC21AQ8NDW8 1320 aa8.05□□□□□ -1.12
MSH6-205ENST00000454137 KIF1AQ12756 1690 aa8.05□□□□□ -1.12
MSH6-205ENST00000454137 USP6P35125 1406 aa8.05□□□□□ -1.12
MSH6-205ENST00000454137 FYB1O15117 783 aa8.05□□□□□ -1.12
MSH6-205ENST00000454137 MAP3K13O43283 966 aa8.05□□□□□ -1.12
MSH6-205ENST00000454137 ERICH6BQ5W0A0 696 aa8.05□□□□□ -1.12
MSH6-205ENST00000454137 MORC1Q86VD1 984 aa8.05□□□□□ -1.12
MSH6-205ENST00000454137 NGEFQ8N5V2 710 aa8.05□□□□□ -1.12
MSH6-205ENST00000454137 MFRPQ9BY79 579 aa8.05□□□□□ -1.12
MSH6-205ENST00000454137 BLMP54132 1417 aaPredicted RBP8.04□□□□□ -1.12
MSH6-205ENST00000454137 MAP2P11137 1827 aaKnown RBP8.04□□□□□ -1.12
MSH6-205ENST00000454137 C19orf44Q9H6X5 657 aa8.04□□□□□ -1.12
MSH6-205ENST00000454137 USP31Q70CQ4 1352 aa8.04□□□□□ -1.12
MSH6-205ENST00000454137 ACEP12821 1306 aa8.03□□□□□ -1.12
MSH6-205ENST00000454137 ZBED9Q6R2W3 1325 aa8.03□□□□□ -1.12
MSH6-205ENST00000454137 SMG6Q86US8 1419 aaKnown RBP8.03□□□□□ -1.12
MSH6-205ENST00000454137 XIRP1Q702N8 1843 aaKnown RBP8.03□□□□□ -1.12
MSH6-205ENST00000454137 SHPRHQ149N8 1683 aa8.03□□□□□ -1.12
MSH6-205ENST00000454137 PNPLA6Q8IY17 1366 aa8.03□□□□□ -1.12
MSH6-205ENST00000454137 MST1RQ04912 1400 aa8.03□□□□□ -1.12
MSH6-205ENST00000454137 PROSER2Q86WR7 435 aaPredicted RBP8.02□□□□□ -1.13
MSH6-205ENST00000454137 ZRANB1Q9UGI0 708 aa8.02□□□□□ -1.13
MSH6-205ENST00000454137 OVOS2A0A0J9YW53 1432 aa8.02□□□□□ -1.13
MSH6-205ENST00000454137 OVOS2Q6IE36 1432 aa8.02□□□□□ -1.13
MSH6-205ENST00000454137 TTC21BQ7Z4L5 1316 aa8.02□□□□□ -1.13
MSH6-205ENST00000454137 KIF24Q5T7B8 1368 aa8.01□□□□□ -1.13
MSH6-205ENST00000454137 EFCAB3Q8N7B9 438 aa8.01□□□□□ -1.13
MSH6-205ENST00000454137 CFAP53Q96M91 514 aa8.01□□□□□ -1.13
MSH6-205ENST00000454137 CD44P16070 742 aaKnown RBP8□□□□□ -1.13
MSH6-205ENST00000454137 HSPA2P54652 639 aa8□□□□□ -1.13
MSH6-205ENST00000454137 CADPS2Q86UW7 1296 aa8□□□□□ -1.13
MSH6-205ENST00000454137 MARF1Q9Y4F3 1742 aaKnown RBP8□□□□□ -1.13
MSH6-205ENST00000454137 COL3A1P02461 1466 aaPredicted RBP8□□□□□ -1.13
MSH6-205ENST00000454137 C1orf167Q5SNV9 1468 aa8□□□□□ -1.13
MSH6-205ENST00000454137 CDK12Q9NYV4 1490 aaPredicted RBP8□□□□□ -1.13
MSH6-205ENST00000454137 TMEM94Q12767 1356 aa7.99□□□□□ -1.13
MSH6-205ENST00000454137 PIK3C2AO00443 1686 aa7.99□□□□□ -1.13
MSH6-205ENST00000454137 MTHFSP49914 203 aa7.99□□□□□ -1.13
MSH6-205ENST00000454137 PDE3BQ13370 1112 aa7.99□□□□□ -1.13
MSH6-205ENST00000454137 WDR43Q15061 677 aaKnown RBP eCLIP7.99□□□□□ -1.13
MSH6-205ENST00000454137 FBXO22Q8NEZ5 403 aa7.99□□□□□ -1.13
MSH6-205ENST00000454137 COG3Q96JB2 828 aa7.99□□□□□ -1.13
MSH6-205ENST00000454137 GGNBP2Q9H3C7 697 aa7.99□□□□□ -1.13
MSH6-205ENST00000454137 TRPM3Q9HCF6 1732 aaPredicted RBP7.99□□□□□ -1.13
MSH6-205ENST00000454137 PHF8Q9UPP1 1060 aa7.99□□□□□ -1.13
MSH6-205ENST00000454137 PHRF1Q9P1Y6 1649 aaKnown RBP7.99□□□□□ -1.13
MSH6-205ENST00000454137 MSH6P52701 1360 aa7.98□□□□□ -1.13
MSH6-205ENST00000454137 TULP1O00294 542 aaPredicted RBP7.98□□□□□ -1.13
MSH6-205ENST00000454137 NGDNQ8NEJ9 315 aaKnown RBP7.98□□□□□ -1.13
MSH6-205ENST00000454137 ATF3P18847 181 aa7.97□□□□□ -1.13
MSH6-205ENST00000454137 GOLGA2Q08379 1002 aa7.97□□□□□ -1.13
MSH6-205ENST00000454137 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.97□□□□□ -1.13
MSH6-205ENST00000454137 ANP32EQ9BTT0 268 aa7.97□□□□□ -1.13
MSH6-205ENST00000454137 PNNQ9H307 717 aaKnown RBP7.97□□□□□ -1.13
MSH6-205ENST00000454137 POLKQ9UBT6 870 aa7.97□□□□□ -1.13
MSH6-205ENST00000454137 ADAMTS8Q9UP79 889 aa7.97□□□□□ -1.13
MSH6-205ENST00000454137 NUDCQ9Y266 331 aa7.97□□□□□ -1.13
MSH6-205ENST00000454137 ALS2Q96Q42 1657 aa7.96□□□□□ -1.13
MSH6-205ENST00000454137 NME9Q86XW9 330 aa7.96□□□□□ -1.14
MSH6-205ENST00000454137 KCNV2Q8TDN2 545 aa7.96□□□□□ -1.14
MSH6-205ENST00000454137 PPP4R2Q9NY27 417 aa7.96□□□□□ -1.14
MSH6-205ENST00000454137 RBM19Q9Y4C8 960 aaKnown RBP7.96□□□□□ -1.14
MSH6-205ENST00000454137 SBNO1A3KN83 1393 aa7.96□□□□□ -1.14
MSH6-205ENST00000454137 SENP3-EIF4A1A0A087X0R7 540 aa7.95□□□□□ -1.14
MSH6-205ENST00000454137 ESCO1Q5FWF5 840 aa7.95□□□□□ -1.14
MSH6-205ENST00000454137 C14orf37Q86TY3 774 aa7.95□□□□□ -1.14
MSH6-205ENST00000454137 PMFBP1Q8TBY8 1022 aa7.95□□□□□ -1.14
MSH6-205ENST00000454137 ARHGEF1Q92888 912 aaKnown RBP7.95□□□□□ -1.14
MSH6-205ENST00000454137 RTL1A6NKG5 1358 aa7.95□□□□□ -1.14
MSH6-205ENST00000454137 SLIT3O75094 1523 aa7.94□□□□□ -1.14
MSH6-205ENST00000454137 ABCC6O95255 1503 aa7.94□□□□□ -1.14
MSH6-205ENST00000454137 DIAPH1O60610 1272 aaKnown RBP7.94□□□□□ -1.14
MSH6-205ENST00000454137 PPP1R37O75864 691 aa7.94□□□□□ -1.14
MSH6-205ENST00000454137 FCHSD2O94868 740 aa7.94□□□□□ -1.14
MSH6-205ENST00000454137 TNNT2P45379 298 aaPredicted RBP7.94□□□□□ -1.14
MSH6-205ENST00000454137 PSME1Q06323 249 aa7.94□□□□□ -1.14
MSH6-205ENST00000454137 CCDC27Q2M243 656 aa7.94□□□□□ -1.14
MSH6-205ENST00000454137 KCNH5Q8NCM2 988 aa7.94□□□□□ -1.14
MSH6-205ENST00000454137 RUNDC1Q96C34 613 aa7.94□□□□□ -1.14
MSH6-205ENST00000454137 ZNF521Q96K83 1311 aa7.94□□□□□ -1.14
MSH6-205ENST00000454137 RGPD1P0DJD0 1748 aa7.94□□□□□ -1.14
MSH6-205ENST00000454137 NFAT5O94916 1531 aa7.93□□□□□ -1.14
MSH6-205ENST00000454137 NUTM2FA1L443 756 aa7.93□□□□□ -1.14
MSH6-205ENST00000454137 E2F4Q16254 413 aa7.93□□□□□ -1.14
MSH6-205ENST00000454137 PHF12Q96QT6 1004 aa7.93□□□□□ -1.14
MSH6-205ENST00000454137 NPHP3Q7Z494 1330 aa7.93□□□□□ -1.14
MSH6-205ENST00000454137 FLT4P35916 1363 aa7.93□□□□□ -1.14
MSH6-205ENST00000454137 IQSEC2Q5JU85 1478 aa7.93□□□□□ -1.14
MSH6-205ENST00000454137 MED1Q15648 1581 aaPredicted RBP7.93□□□□□ -1.14
MSH6-205ENST00000454137 NHSL1Q5SYE7 1610 aa7.92□□□□□ -1.14
MSH6-205ENST00000454137 LTBP4Q8N2S1 1624 aa7.92□□□□□ -1.14
MSH6-205ENST00000454137 PEAK1Q9H792 1746 aa7.92□□□□□ -1.14
MSH6-205ENST00000454137 LTN1O94822 1766 aa7.92□□□□□ -1.14
MSH6-205ENST00000454137 PDE4AP27815 886 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms