RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 DEFB132Q7Z7B7 95 aa23.97■■□□□ 1.43
TNFRSF4-202ENST00000453580 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.97■■□□□ 1.43
TNFRSF4-202ENST00000453580 SLC12A5Q9H2X9 1139 aa23.97■■□□□ 1.43
TNFRSF4-202ENST00000453580 PARP4Q9UKK3 1724 aaKnown RBP23.96■■□□□ 1.43
TNFRSF4-202ENST00000453580 WDR17Q8IZU2 1322 aa23.96■■□□□ 1.43
TNFRSF4-202ENST00000453580 TMF1P82094 1093 aa23.96■■□□□ 1.43
TNFRSF4-202ENST00000453580 TESK2Q96S53 571 aa23.96■■□□□ 1.43
TNFRSF4-202ENST00000453580 CD163L1Q9NR16 1453 aa23.95■■□□□ 1.42
TNFRSF4-202ENST00000453580 PCGF6Q9BYE7 350 aa23.94■■□□□ 1.42
TNFRSF4-202ENST00000453580 DISP2A7MBM2 1401 aa23.93■■□□□ 1.42
TNFRSF4-202ENST00000453580 USP47Q96K76 1375 aa23.93■■□□□ 1.42
TNFRSF4-202ENST00000453580 SOX12O15370 315 aa23.93■■□□□ 1.42
TNFRSF4-202ENST00000453580 CSB-PGBD3P0DP91 1061 aa23.93■■□□□ 1.42
TNFRSF4-202ENST00000453580 NFAT5O94916 1531 aa23.93■■□□□ 1.42
TNFRSF4-202ENST00000453580 A0A1W2PP64 1363 aa23.92■■□□□ 1.42
TNFRSF4-202ENST00000453580 FAM182BQ5T319 152 aa23.92■■□□□ 1.42
TNFRSF4-202ENST00000453580 NME9Q86XW9 330 aa23.9■■□□□ 1.42
TNFRSF4-202ENST00000453580 AXIN2Q9Y2T1 843 aa23.9■■□□□ 1.42
TNFRSF4-202ENST00000453580 RGPD5Q99666 1765 aa23.9■■□□□ 1.42
TNFRSF4-202ENST00000453580 PARD3Q8TEW0 1356 aa23.9■■□□□ 1.42
TNFRSF4-202ENST00000453580 DDB1Q16531 1140 aa23.89■■□□□ 1.41
TNFRSF4-202ENST00000453580 CARD10Q9BWT7 1032 aa23.89■■□□□ 1.41
TNFRSF4-202ENST00000453580 TNS1Q9HBL0 1735 aaKnown RBP23.89■■□□□ 1.41
TNFRSF4-202ENST00000453580 CCDC7Q96M83 1385 aa23.89■■□□□ 1.41
TNFRSF4-202ENST00000453580 TRIM37O94972 964 aa23.88■■□□□ 1.41
TNFRSF4-202ENST00000453580 LTN1O94822 1766 aa23.87■■□□□ 1.41
TNFRSF4-202ENST00000453580 WNK3Q9BYP7 1800 aa23.87■■□□□ 1.41
TNFRSF4-202ENST00000453580 OVOS2A0A0G2JMS6 1433 aa23.86■■□□□ 1.41
TNFRSF4-202ENST00000453580 OVOS2A0A0J9YW53 1432 aa23.86■■□□□ 1.41
TNFRSF4-202ENST00000453580 OVOS2Q6IE36 1432 aa23.86■■□□□ 1.41
TNFRSF4-202ENST00000453580 EN1Q05925 392 aaPredicted RBP23.86■■□□□ 1.41
TNFRSF4-202ENST00000453580 ANKRD36BQ8N2N9 1353 aa23.86■■□□□ 1.41
TNFRSF4-202ENST00000453580 COG3Q96JB2 828 aa23.85■■□□□ 1.41
TNFRSF4-202ENST00000453580 APBA3O96018 575 aa23.84■■□□□ 1.41
TNFRSF4-202ENST00000453580 LRRC37A3O60309 1634 aa23.83■■□□□ 1.41
TNFRSF4-202ENST00000453580 EXOC5O00471 708 aa23.81■■□□□ 1.4
TNFRSF4-202ENST00000453580 ERBB3P21860 1342 aa23.81■■□□□ 1.4
TNFRSF4-202ENST00000453580 CCER1Q8TC90 406 aaPredicted RBP23.79■■□□□ 1.4
TNFRSF4-202ENST00000453580 CAMKK2Q96RR4 588 aa23.79■■□□□ 1.4
TNFRSF4-202ENST00000453580 NLRP2Q9NX02 1062 aa23.78■■□□□ 1.4
TNFRSF4-202ENST00000453580 BCL9O00512 1426 aa23.77■■□□□ 1.4
TNFRSF4-202ENST00000453580 FAM208AQ9UK61 1670 aaKnown RBP23.77■■□□□ 1.4
TNFRSF4-202ENST00000453580 PEAK1Q9H792 1746 aa23.77■■□□□ 1.4
TNFRSF4-202ENST00000453580 EZH2Q15910 746 aaKnown RBP23.77■■□□□ 1.4
TNFRSF4-202ENST00000453580 IP6K1Q92551 441 aa23.77■■□□□ 1.4
TNFRSF4-202ENST00000453580 NBPF14Q5TI25 921 aa23.76■■□□□ 1.39
TNFRSF4-202ENST00000453580 ANKRD24Q8TF21 1146 aa23.76■■□□□ 1.39
TNFRSF4-202ENST00000453580 SBF2Q86WG5 1849 aa23.75■■□□□ 1.39
TNFRSF4-202ENST00000453580 RGPD3A6NKT7 1758 aaPredicted RBP23.74■■□□□ 1.39
TNFRSF4-202ENST00000453580 RGPD4Q7Z3J3 1758 aa23.74■■□□□ 1.39
TNFRSF4-202ENST00000453580 BCL11BQ9C0K0 894 aaPredicted RBP23.74■■□□□ 1.39
TNFRSF4-202ENST00000453580 IL2RBP14784 551 aa23.73■■□□□ 1.39
TNFRSF4-202ENST00000453580 AMPHP49418 695 aa23.73■■□□□ 1.39
TNFRSF4-202ENST00000453580 RREB1Q92766 1687 aa23.73■■□□□ 1.39
TNFRSF4-202ENST00000453580 PLSCR1O15162 318 aa23.72■■□□□ 1.39
TNFRSF4-202ENST00000453580 TNS2Q63HR2 1409 aa23.72■■□□□ 1.39
TNFRSF4-202ENST00000453580 LRP5O75197 1615 aa23.71■■□□□ 1.39
TNFRSF4-202ENST00000453580 RTL1A6NKG5 1358 aa23.71■■□□□ 1.39
TNFRSF4-202ENST00000453580 MARCH10Q8NA82 808 aaPredicted RBP23.71■■□□□ 1.39
TNFRSF4-202ENST00000453580 KIF20BQ96Q89 1820 aa23.7■■□□□ 1.39
TNFRSF4-202ENST00000453580 PSDA5PKW4 1024 aaPredicted RBP23.7■■□□□ 1.38
TNFRSF4-202ENST00000453580 FYB1O15117 783 aa23.7■■□□□ 1.38
TNFRSF4-202ENST00000453580 EIF4G2P78344 907 aaKnown RBP eCLIP23.69■■□□□ 1.38
TNFRSF4-202ENST00000453580 MAP3K19Q56UN5 1328 aa23.68■■□□□ 1.38
TNFRSF4-202ENST00000453580 R3HDM1Q15032 1099 aaKnown RBP23.68■■□□□ 1.38
TNFRSF4-202ENST00000453580 HOXC9P31274 260 aa23.67■■□□□ 1.38
TNFRSF4-202ENST00000453580 NUP188Q5SRE5 1749 aa23.67■■□□□ 1.38
TNFRSF4-202ENST00000453580 SMG6Q86US8 1419 aaKnown RBP23.67■■□□□ 1.38
TNFRSF4-202ENST00000453580 KIF24Q5T7B8 1368 aa23.66■■□□□ 1.38
TNFRSF4-202ENST00000453580 GGNBP2Q9H3C7 697 aa23.66■■□□□ 1.38
TNFRSF4-202ENST00000453580 MYOM1P52179 1685 aa23.65■■□□□ 1.38
TNFRSF4-202ENST00000453580 LTV1Q96GA3 475 aaPredicted RBP23.64■■□□□ 1.37
TNFRSF4-202ENST00000453580 CGNL1Q0VF96 1302 aa23.61■■□□□ 1.37
TNFRSF4-202ENST00000453580 NSD3Q9BZ95 1437 aa23.61■■□□□ 1.37
TNFRSF4-202ENST00000453580 NHSQ6T4R5 1651 aa23.6■■□□□ 1.37
TNFRSF4-202ENST00000453580 KAT6BQ8WYB5 2073 aa23.6■■□□□ 1.37
TNFRSF4-202ENST00000453580 RRS1Q15050 365 aaKnown RBP23.59■■□□□ 1.37
TNFRSF4-202ENST00000453580 FLT4P35916 1363 aa23.59■■□□□ 1.37
TNFRSF4-202ENST00000453580 INSRP06213 1382 aa23.58■■□□□ 1.37
TNFRSF4-202ENST00000453580 CARD14Q9BXL6 1004 aa23.58■■□□□ 1.37
TNFRSF4-202ENST00000453580 POLR3GLQ9BT43 218 aa23.56■■□□□ 1.36
TNFRSF4-202ENST00000453580 HSPA5P11021 654 aaKnown RBP23.55■■□□□ 1.36
TNFRSF4-202ENST00000453580 FBLN1P23142 703 aa23.55■■□□□ 1.36
TNFRSF4-202ENST00000453580 RAPGEF4Q8WZA2 1011 aa23.55■■□□□ 1.36
TNFRSF4-202ENST00000453580 DDX54Q8TDD1 881 aaKnown RBP23.54■■□□□ 1.36
TNFRSF4-202ENST00000453580 RGPD2P0DJD1 1756 aa23.53■■□□□ 1.36
TNFRSF4-202ENST00000453580 TXNRD1Q16881 649 aa23.53■■□□□ 1.36
TNFRSF4-202ENST00000453580 ZCRB1Q8TBF4 217 aaKnown RBP23.53■■□□□ 1.36
TNFRSF4-202ENST00000453580 ACSBG1Q96GR2 724 aa23.52■■□□□ 1.36
TNFRSF4-202ENST00000453580 KCNQ2O43526 872 aa23.51■■□□□ 1.35
TNFRSF4-202ENST00000453580 PTF1AQ7RTS3 328 aa23.51■■□□□ 1.35
TNFRSF4-202ENST00000453580 STK32BQ9NY57 414 aa23.51■■□□□ 1.35
TNFRSF4-202ENST00000453580 TATP17735 454 aaPredicted RBP23.5■■□□□ 1.35
TNFRSF4-202ENST00000453580 NBPF6Q5VWK0 638 aa23.5■■□□□ 1.35
TNFRSF4-202ENST00000453580 NBPF4Q96M43 638 aa23.5■■□□□ 1.35
TNFRSF4-202ENST00000453580 SPON1Q9HCB6 807 aa23.5■■□□□ 1.35
TNFRSF4-202ENST00000453580 BTAF1O14981 1849 aa23.49■■□□□ 1.35
TNFRSF4-202ENST00000453580 HMGB2P26583 209 aaKnown RBP23.49■■□□□ 1.35
TNFRSF4-202ENST00000453580 HSP90AB2PQ58FF8 381 aa23.49■■□□□ 1.35
TNFRSF4-202ENST00000453580 ANKRD26Q9UPS8 1709 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms