RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 ZNF692Q9BU19 519 aaPredicted RBP21.65■■□□□ 1.06
VCX3B-204ENST00000453306 TRIM37O94972 964 aa21.64■■□□□ 1.05
VCX3B-204ENST00000453306 TERF2IPQ9NYB0 399 aa21.64■■□□□ 1.05
VCX3B-204ENST00000453306 KTN1Q86UP2 1357 aaKnown RBP21.63■■□□□ 1.05
VCX3B-204ENST00000453306 TTC21BQ7Z4L5 1316 aa21.63■■□□□ 1.05
VCX3B-204ENST00000453306 LARP1Q6PKG0 1096 aaKnown RBP21.63■■□□□ 1.05
VCX3B-204ENST00000453306 HDGFL2Q7Z4V5 671 aaPredicted RBP21.63■■□□□ 1.05
VCX3B-204ENST00000453306 PARD3Q8TEW0 1356 aa21.62■■□□□ 1.05
VCX3B-204ENST00000453306 PER1O15534 1290 aaPredicted RBP21.62■■□□□ 1.05
VCX3B-204ENST00000453306 CAMTA1Q9Y6Y1 1673 aa21.62■■□□□ 1.05
VCX3B-204ENST00000453306 APBA3O96018 575 aa21.61■■□□□ 1.05
VCX3B-204ENST00000453306 EZH2Q15910 746 aaKnown RBP21.61■■□□□ 1.05
VCX3B-204ENST00000453306 TNS1Q9HBL0 1735 aaKnown RBP21.6■■□□□ 1.05
VCX3B-204ENST00000453306 NLRP6P59044 892 aa21.6■■□□□ 1.05
VCX3B-204ENST00000453306 R3HDM1Q15032 1099 aaKnown RBP21.6■■□□□ 1.05
VCX3B-204ENST00000453306 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.6■■□□□ 1.05
VCX3B-204ENST00000453306 LMO7Q8WWI1 1683 aa21.6■■□□□ 1.05
VCX3B-204ENST00000453306 DDX10Q13206 875 aaKnown RBP21.59■■□□□ 1.05
VCX3B-204ENST00000453306 NME9Q86XW9 330 aa21.59■■□□□ 1.05
VCX3B-204ENST00000453306 CAMKK2Q96RR4 588 aa21.59■■□□□ 1.05
VCX3B-204ENST00000453306 EDC4Q6P2E9 1401 aaKnown RBP21.57■■□□□ 1.04
VCX3B-204ENST00000453306 COL5A2P05997 1499 aaPredicted RBP21.57■■□□□ 1.04
VCX3B-204ENST00000453306 NSD3Q9BZ95 1437 aa21.56■■□□□ 1.04
VCX3B-204ENST00000453306 ZBTB7CA1YPR0 619 aa21.56■■□□□ 1.04
VCX3B-204ENST00000453306 FYB1O15117 783 aa21.56■■□□□ 1.04
VCX3B-204ENST00000453306 AATKQ6ZMQ8 1374 aa21.56■■□□□ 1.04
VCX3B-204ENST00000453306 CRB1P82279 1406 aa21.55■■□□□ 1.04
VCX3B-204ENST00000453306 AKAP12Q02952 1782 aa21.55■■□□□ 1.04
VCX3B-204ENST00000453306 NBPF14Q5TI25 921 aa21.54■■□□□ 1.04
VCX3B-204ENST00000453306 AMER1Q5JTC6 1135 aaPredicted RBP21.53■■□□□ 1.04
VCX3B-204ENST00000453306 SLIT3O75094 1523 aa21.53■■□□□ 1.04
VCX3B-204ENST00000453306 TTC21AQ8NDW8 1320 aa21.53■■□□□ 1.04
VCX3B-204ENST00000453306 MON2Q7Z3U7 1717 aa21.52■■□□□ 1.04
VCX3B-204ENST00000453306 KCNH5Q8NCM2 988 aa21.52■■□□□ 1.04
VCX3B-204ENST00000453306 TOM1L2Q6ZVM7 507 aa21.51■■□□□ 1.03
VCX3B-204ENST00000453306 GGNBP2Q9H3C7 697 aa21.51■■□□□ 1.03
VCX3B-204ENST00000453306 PARP4Q9UKK3 1724 aaKnown RBP21.5■■□□□ 1.03
VCX3B-204ENST00000453306 USP31Q70CQ4 1352 aa21.49■■□□□ 1.03
VCX3B-204ENST00000453306 OVOS2A0A0G2JMS6 1433 aa21.49■■□□□ 1.03
VCX3B-204ENST00000453306 OVOS2A0A0J9YW53 1432 aa21.49■■□□□ 1.03
VCX3B-204ENST00000453306 OVOS2Q6IE36 1432 aa21.49■■□□□ 1.03
VCX3B-204ENST00000453306 DDB1Q16531 1140 aa21.49■■□□□ 1.03
VCX3B-204ENST00000453306 FBLN1P23142 703 aa21.48■■□□□ 1.03
VCX3B-204ENST00000453306 CDCA7Q9BWT1 371 aaPredicted RBP21.48■■□□□ 1.03
VCX3B-204ENST00000453306 PIK3C2AO00443 1686 aa21.47■■□□□ 1.03
VCX3B-204ENST00000453306 WDR17Q8IZU2 1322 aa21.47■■□□□ 1.03
VCX3B-204ENST00000453306 KNSTRNQ9Y448 316 aa21.46■■□□□ 1.03
VCX3B-204ENST00000453306 RREB1Q92766 1687 aa21.45■■□□□ 1.02
VCX3B-204ENST00000453306 ARHGEF25Q86VW2 580 aa21.45■■□□□ 1.02
VCX3B-204ENST00000453306 CGNL1Q0VF96 1302 aa21.45■■□□□ 1.02
VCX3B-204ENST00000453306 CSB-PGBD3P0DP91 1061 aa21.43■■□□□ 1.02
VCX3B-204ENST00000453306 AXIN2Q9Y2T1 843 aa21.43■■□□□ 1.02
VCX3B-204ENST00000453306 PLSCR1O15162 318 aa21.42■■□□□ 1.02
VCX3B-204ENST00000453306 CNGB1Q14028 1251 aaPredicted RBP21.42■■□□□ 1.02
VCX3B-204ENST00000453306 CC2D1BQ5T0F9 858 aaKnown RBP21.42■■□□□ 1.02
VCX3B-204ENST00000453306 NUP188Q5SRE5 1749 aa21.41■■□□□ 1.02
VCX3B-204ENST00000453306 SOX12O15370 315 aa21.41■■□□□ 1.02
VCX3B-204ENST00000453306 CARD10Q9BWT7 1032 aa21.41■■□□□ 1.02
VCX3B-204ENST00000453306 BCL11BQ9C0K0 894 aaPredicted RBP21.41■■□□□ 1.02
VCX3B-204ENST00000453306 COL18A1P39060 1754 aa21.41■■□□□ 1.02
VCX3B-204ENST00000453306 LRRC37A3O60309 1634 aa21.4■■□□□ 1.02
VCX3B-204ENST00000453306 COG3Q96JB2 828 aa21.4■■□□□ 1.02
VCX3B-204ENST00000453306 NPC1L1Q9UHC9 1359 aa21.39■■□□□ 1.02
VCX3B-204ENST00000453306 PEAK1Q9H792 1746 aa21.38■■□□□ 1.01
VCX3B-204ENST00000453306 SPON1Q9HCB6 807 aa21.38■■□□□ 1.01
VCX3B-204ENST00000453306 BCL9O00512 1426 aa21.38■■□□□ 1.01
VCX3B-204ENST00000453306 EXOC5O00471 708 aa21.37■■□□□ 1.01
VCX3B-204ENST00000453306 ABCC6O95255 1503 aa21.37■■□□□ 1.01
VCX3B-204ENST00000453306 RGPD3A6NKT7 1758 aaPredicted RBP21.36■■□□□ 1.01
VCX3B-204ENST00000453306 RGPD4Q7Z3J3 1758 aa21.36■■□□□ 1.01
VCX3B-204ENST00000453306 MARCH10Q8NA82 808 aaPredicted RBP21.36■■□□□ 1.01
VCX3B-204ENST00000453306 PPP1R1BQ9UD71 204 aaPredicted RBP21.36■■□□□ 1.01
VCX3B-204ENST00000453306 NFAT5O94916 1531 aa21.35■■□□□ 1.01
VCX3B-204ENST00000453306 TNNT2P45379 298 aaPredicted RBP21.35■■□□□ 1.01
VCX3B-204ENST00000453306 MORC1Q86VD1 984 aa21.35■■□□□ 1.01
VCX3B-204ENST00000453306 NSD2O96028 1365 aa21.35■■□□□ 1.01
VCX3B-204ENST00000453306 KCNQ2O43526 872 aa21.34■■□□□ 1.01
VCX3B-204ENST00000453306 RRS1Q15050 365 aaKnown RBP21.34■■□□□ 1.01
VCX3B-204ENST00000453306 USP54Q70EL1 1684 aa21.34■■□□□ 1.01
VCX3B-204ENST00000453306 WNK3Q9BYP7 1800 aa21.34■■□□□ 1.01
VCX3B-204ENST00000453306 SBF2Q86WG5 1849 aa21.32■■□□□ 1
VCX3B-204ENST00000453306 MAP3K19Q56UN5 1328 aa21.31■■□□□ 1
VCX3B-204ENST00000453306 DCAF8L1A6NGE4 600 aa21.31■■□□□ 1
VCX3B-204ENST00000453306 POLKQ9UBT6 870 aa21.31■■□□□ 1
VCX3B-204ENST00000453306 EMILIN1Q9Y6C2 1016 aa21.3■■□□□ 1
VCX3B-204ENST00000453306 RGPD5Q99666 1765 aa21.3■■□□□ 1
VCX3B-204ENST00000453306 KIF20BQ96Q89 1820 aa21.29■■□□□ 1
VCX3B-204ENST00000453306 TNS2Q63HR2 1409 aa21.29■■□□□ 1
VCX3B-204ENST00000453306 ERBB3P21860 1342 aa21.29■■□□□ 1
VCX3B-204ENST00000453306 NLRP2Q9NX02 1062 aa21.28■■□□□ 1
VCX3B-204ENST00000453306 PTF1AQ7RTS3 328 aa21.27■■□□□ 1
VCX3B-204ENST00000453306 PRKRIP1Q9H875 184 aaPredicted RBP21.26■□□□□ 0.99
VCX3B-204ENST00000453306 ANO8Q9HCE9 1232 aaPredicted RBP21.26■□□□□ 0.99
VCX3B-204ENST00000453306 STK32BQ9NY57 414 aa21.26■□□□□ 0.99
VCX3B-204ENST00000453306 IL2RBP14784 551 aa21.25■□□□□ 0.99
VCX3B-204ENST00000453306 PPP2R1AP30153 589 aa21.25■□□□□ 0.99
VCX3B-204ENST00000453306 TXNRD1Q16881 649 aa21.25■□□□□ 0.99
VCX3B-204ENST00000453306 PROM2Q8N271 834 aa21.25■□□□□ 0.99
VCX3B-204ENST00000453306 ANKRD24Q8TF21 1146 aa21.24■□□□□ 0.99
VCX3B-204ENST00000453306 YY1P25490 414 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms