RNA–Protein interactions for RNA: ENST00000453260.6

TNFRSF25-207, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-207ENST00000453260 PARP4Q9UKK3 1724 aaKnown RBP26.02■■□□□ 1.76
TNFRSF25-207ENST00000453260 CSB-PGBD3P0DP91 1061 aa26.01■■□□□ 1.75
TNFRSF25-207ENST00000453260 COL18A1P39060 1754 aa26.01■■□□□ 1.75
TNFRSF25-207ENST00000453260 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.01■■□□□ 1.75
TNFRSF25-207ENST00000453260 DDB1Q16531 1140 aa26■■□□□ 1.75
TNFRSF25-207ENST00000453260 CDCA7Q9BWT1 371 aaPredicted RBP26■■□□□ 1.75
TNFRSF25-207ENST00000453260 SLC24A1O60721 1099 aa25.99■■□□□ 1.75
TNFRSF25-207ENST00000453260 R3HDM1Q15032 1099 aaKnown RBP25.99■■□□□ 1.75
TNFRSF25-207ENST00000453260 PUS7Q96PZ0 661 aaKnown RBP25.99■■□□□ 1.75
TNFRSF25-207ENST00000453260 TERF2IPQ9NYB0 399 aa25.99■■□□□ 1.75
TNFRSF25-207ENST00000453260 MON2Q7Z3U7 1717 aa25.97■■□□□ 1.75
TNFRSF25-207ENST00000453260 CARD10Q9BWT7 1032 aa25.96■■□□□ 1.75
TNFRSF25-207ENST00000453260 SLC12A5Q9H2X9 1139 aa25.96■■□□□ 1.75
TNFRSF25-207ENST00000453260 OVOS2A0A0G2JMS6 1433 aa25.96■■□□□ 1.75
TNFRSF25-207ENST00000453260 OVOS2A0A0J9YW53 1432 aa25.96■■□□□ 1.75
TNFRSF25-207ENST00000453260 OVOS2Q6IE36 1432 aa25.96■■□□□ 1.75
TNFRSF25-207ENST00000453260 LRP5O75197 1615 aa25.96■■□□□ 1.75
TNFRSF25-207ENST00000453260 NBPF14Q5TI25 921 aa25.95■■□□□ 1.74
TNFRSF25-207ENST00000453260 RGPD5Q99666 1765 aa25.95■■□□□ 1.74
TNFRSF25-207ENST00000453260 USP31Q70CQ4 1352 aa25.95■■□□□ 1.74
TNFRSF25-207ENST00000453260 NFAT5O94916 1531 aa25.93■■□□□ 1.74
TNFRSF25-207ENST00000453260 NME9Q86XW9 330 aa25.92■■□□□ 1.74
TNFRSF25-207ENST00000453260 ABCC6O95255 1503 aa25.91■■□□□ 1.74
TNFRSF25-207ENST00000453260 CD163L1Q9NR16 1453 aa25.91■■□□□ 1.74
TNFRSF25-207ENST00000453260 EDC4Q6P2E9 1401 aaKnown RBP25.9■■□□□ 1.74
TNFRSF25-207ENST00000453260 ST20-MTHFSA0A0A6YYL1 179 aa25.9■■□□□ 1.74
TNFRSF25-207ENST00000453260 EXOC5O00471 708 aa25.9■■□□□ 1.74
TNFRSF25-207ENST00000453260 LRRC37A3O60309 1634 aa25.89■■□□□ 1.74
TNFRSF25-207ENST00000453260 CCDC7Q96M83 1385 aa25.89■■□□□ 1.74
TNFRSF25-207ENST00000453260 NINLQ9Y2I6 1382 aa25.88■■□□□ 1.73
TNFRSF25-207ENST00000453260 TESK2Q96S53 571 aa25.87■■□□□ 1.73
TNFRSF25-207ENST00000453260 BCL11BQ9C0K0 894 aaPredicted RBP25.87■■□□□ 1.73
TNFRSF25-207ENST00000453260 USP54Q70EL1 1684 aa25.87■■□□□ 1.73
TNFRSF25-207ENST00000453260 WNK3Q9BYP7 1800 aa25.86■■□□□ 1.73
TNFRSF25-207ENST00000453260 PEAK1Q9H792 1746 aa25.86■■□□□ 1.73
TNFRSF25-207ENST00000453260 A0A1W2PP64 1363 aa25.86■■□□□ 1.73
TNFRSF25-207ENST00000453260 PLSCR1O15162 318 aa25.86■■□□□ 1.73
TNFRSF25-207ENST00000453260 MARCH10Q8NA82 808 aaPredicted RBP25.86■■□□□ 1.73
TNFRSF25-207ENST00000453260 RREB1Q92766 1687 aa25.86■■□□□ 1.73
TNFRSF25-207ENST00000453260 SBF2Q86WG5 1849 aa25.86■■□□□ 1.73
TNFRSF25-207ENST00000453260 NLRP2Q9NX02 1062 aa25.85■■□□□ 1.73
TNFRSF25-207ENST00000453260 BCL9O00512 1426 aa25.83■■□□□ 1.73
TNFRSF25-207ENST00000453260 ERBB3P21860 1342 aa25.83■■□□□ 1.73
TNFRSF25-207ENST00000453260 LTN1O94822 1766 aa25.82■■□□□ 1.72
TNFRSF25-207ENST00000453260 NUP188Q5SRE5 1749 aa25.82■■□□□ 1.72
TNFRSF25-207ENST00000453260 ANKRD24Q8TF21 1146 aa25.8■■□□□ 1.72
TNFRSF25-207ENST00000453260 TMF1P82094 1093 aa25.79■■□□□ 1.72
TNFRSF25-207ENST00000453260 COG3Q96JB2 828 aa25.79■■□□□ 1.72
TNFRSF25-207ENST00000453260 RGPD3A6NKT7 1758 aaPredicted RBP25.78■■□□□ 1.72
TNFRSF25-207ENST00000453260 RGPD4Q7Z3J3 1758 aa25.78■■□□□ 1.72
TNFRSF25-207ENST00000453260 IL2RBP14784 551 aa25.77■■□□□ 1.72
TNFRSF25-207ENST00000453260 IP6K1Q92551 441 aa25.76■■□□□ 1.71
TNFRSF25-207ENST00000453260 TNS2Q63HR2 1409 aa25.75■■□□□ 1.71
TNFRSF25-207ENST00000453260 CDCA8Q53HL2 280 aa25.75■■□□□ 1.71
TNFRSF25-207ENST00000453260 PTF1AQ7RTS3 328 aa25.75■■□□□ 1.71
TNFRSF25-207ENST00000453260 USP47Q96K76 1375 aa25.74■■□□□ 1.71
TNFRSF25-207ENST00000453260 KAT6BQ8WYB5 2073 aa25.74■■□□□ 1.71
TNFRSF25-207ENST00000453260 ANKRD36BQ8N2N9 1353 aa25.73■■□□□ 1.71
TNFRSF25-207ENST00000453260 SPON1Q9HCB6 807 aa25.72■■□□□ 1.71
TNFRSF25-207ENST00000453260 TIMELESSQ9UNS1 1208 aa25.72■■□□□ 1.71
TNFRSF25-207ENST00000453260 AMPHP49418 695 aa25.71■■□□□ 1.71
TNFRSF25-207ENST00000453260 LTV1Q96GA3 475 aaPredicted RBP25.7■■□□□ 1.7
TNFRSF25-207ENST00000453260 KCNQ2O43526 872 aa25.69■■□□□ 1.7
TNFRSF25-207ENST00000453260 PROM2Q8N271 834 aa25.69■■□□□ 1.7
TNFRSF25-207ENST00000453260 TXNRD1Q16881 649 aa25.68■■□□□ 1.7
TNFRSF25-207ENST00000453260 PPP1R1BQ9UD71 204 aaPredicted RBP25.68■■□□□ 1.7
TNFRSF25-207ENST00000453260 ACSBG1Q96GR2 724 aa25.67■■□□□ 1.7
TNFRSF25-207ENST00000453260 MAP3K19Q56UN5 1328 aa25.66■■□□□ 1.7
TNFRSF25-207ENST00000453260 HOXC9P31274 260 aa25.66■■□□□ 1.7
TNFRSF25-207ENST00000453260 FAM208AQ9UK61 1670 aaKnown RBP25.66■■□□□ 1.7
TNFRSF25-207ENST00000453260 CLSPNQ9HAW4 1339 aa25.65■■□□□ 1.7
TNFRSF25-207ENST00000453260 STK32BQ9NY57 414 aa25.65■■□□□ 1.7
TNFRSF25-207ENST00000453260 FYB1O15117 783 aa25.64■■□□□ 1.7
TNFRSF25-207ENST00000453260 ANO8Q9HCE9 1232 aaPredicted RBP25.64■■□□□ 1.7
TNFRSF25-207ENST00000453260 PCGF6Q9BYE7 350 aa25.63■■□□□ 1.69
TNFRSF25-207ENST00000453260 NHSQ6T4R5 1651 aa25.62■■□□□ 1.69
TNFRSF25-207ENST00000453260 FBLN1P23142 703 aa25.62■■□□□ 1.69
TNFRSF25-207ENST00000453260 DDX54Q8TDD1 881 aaKnown RBP25.62■■□□□ 1.69
TNFRSF25-207ENST00000453260 GGNBP2Q9H3C7 697 aa25.62■■□□□ 1.69
TNFRSF25-207ENST00000453260 SLC15A2Q16348 729 aa25.6■■□□□ 1.69
TNFRSF25-207ENST00000453260 RTL1A6NKG5 1358 aa25.59■■□□□ 1.69
TNFRSF25-207ENST00000453260 RRS1Q15050 365 aaKnown RBP25.58■■□□□ 1.69
TNFRSF25-207ENST00000453260 DCAF8L1A6NGE4 600 aa25.57■■□□□ 1.68
TNFRSF25-207ENST00000453260 ZCRB1Q8TBF4 217 aaKnown RBP25.56■■□□□ 1.68
TNFRSF25-207ENST00000453260 SMG6Q86US8 1419 aaKnown RBP25.55■■□□□ 1.68
TNFRSF25-207ENST00000453260 BTAF1O14981 1849 aa25.55■■□□□ 1.68
TNFRSF25-207ENST00000453260 CASZ1Q86V15 1759 aa25.54■■□□□ 1.68
TNFRSF25-207ENST00000453260 ZBTB7AO95365 584 aa25.53■■□□□ 1.68
TNFRSF25-207ENST00000453260 PDGFDQ9GZP0 370 aaPredicted RBP25.53■■□□□ 1.68
TNFRSF25-207ENST00000453260 CGNL1Q0VF96 1302 aa25.53■■□□□ 1.68
TNFRSF25-207ENST00000453260 RGPD2P0DJD1 1756 aa25.52■■□□□ 1.68
TNFRSF25-207ENST00000453260 KIF20BQ96Q89 1820 aa25.52■■□□□ 1.68
TNFRSF25-207ENST00000453260 NBPF6Q5VWK0 638 aa25.52■■□□□ 1.68
TNFRSF25-207ENST00000453260 RAPGEF4Q8WZA2 1011 aa25.52■■□□□ 1.68
TNFRSF25-207ENST00000453260 SYTL4Q96C24 671 aaPredicted RBP25.52■■□□□ 1.68
TNFRSF25-207ENST00000453260 NBPF4Q96M43 638 aa25.52■■□□□ 1.68
TNFRSF25-207ENST00000453260 KIF24Q5T7B8 1368 aa25.51■■□□□ 1.67
TNFRSF25-207ENST00000453260 SLC27A3Q5K4L6 730 aa25.5■■□□□ 1.67
TNFRSF25-207ENST00000453260 CARD14Q9BXL6 1004 aa25.5■■□□□ 1.67
TNFRSF25-207ENST00000453260 ATF5Q9Y2D1 282 aaPredicted RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms