RNA–Protein interactions for RNA: ENST00000453213.1

LINC00963-206, long intergenic non-protein coding RNA 963, humanhuman

TSL 3

Gene LINC00963, Length 469 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-206ENST00000453213 GCP02774 474 aa12.66□□□□□ -0.38
LINC00963-206ENST00000453213 TOM1L2Q6ZVM7 507 aa12.66□□□□□ -0.38
LINC00963-206ENST00000453213 NLRP13Q86W25 1043 aa12.66□□□□□ -0.38
LINC00963-206ENST00000453213 AATKQ6ZMQ8 1374 aa12.66□□□□□ -0.38
LINC00963-206ENST00000453213 SHANK3Q9BYB0 1731 aa12.65□□□□□ -0.38
LINC00963-206ENST00000453213 ACEP12821 1306 aa12.65□□□□□ -0.38
LINC00963-206ENST00000453213 POLD1P28340 1107 aa12.65□□□□□ -0.38
LINC00963-206ENST00000453213 MPHOSPH9Q99550 1183 aa12.65□□□□□ -0.38
LINC00963-206ENST00000453213 CDCA7Q9BWT1 371 aaPredicted RBP12.65□□□□□ -0.38
LINC00963-206ENST00000453213 SBF2Q86WG5 1849 aa12.65□□□□□ -0.39
LINC00963-206ENST00000453213 GRIN3BO60391 1043 aa12.64□□□□□ -0.39
LINC00963-206ENST00000453213 POLR3AO14802 1390 aaPredicted RBP12.64□□□□□ -0.39
LINC00963-206ENST00000453213 ADGRB1O14514 1584 aa12.64□□□□□ -0.39
LINC00963-206ENST00000453213 GPBP1L1Q9HC44 474 aaPredicted RBP12.63□□□□□ -0.39
LINC00963-206ENST00000453213 ATP10DQ9P241 1426 aa12.62□□□□□ -0.39
LINC00963-206ENST00000453213 ITSN1Q15811 1721 aa12.62□□□□□ -0.39
LINC00963-206ENST00000453213 CCDC61Q9Y6R9 512 aa12.62□□□□□ -0.39
LINC00963-206ENST00000453213 EXOC5O00471 708 aa12.61□□□□□ -0.39
LINC00963-206ENST00000453213 NLGN2Q8NFZ4 835 aa12.61□□□□□ -0.39
LINC00963-206ENST00000453213 SLC16A10Q8TF71 515 aa12.61□□□□□ -0.39
LINC00963-206ENST00000453213 CDK19Q9BWU1 502 aa12.61□□□□□ -0.39
LINC00963-206ENST00000453213 PLEKHG3A1L390 1219 aa12.6□□□□□ -0.39
LINC00963-206ENST00000453213 WDR17Q8IZU2 1322 aa12.6□□□□□ -0.39
LINC00963-206ENST00000453213 YBX3P16989 372 aaKnown RBP eCLIP12.59□□□□□ -0.39
LINC00963-206ENST00000453213 ZNF827Q17R98 1081 aa12.59□□□□□ -0.39
LINC00963-206ENST00000453213 CSB-PGBD3P0DP91 1061 aa12.58□□□□□ -0.4
LINC00963-206ENST00000453213 ZNF526Q8TF50 670 aaPredicted RBP12.58□□□□□ -0.4
LINC00963-206ENST00000453213 NLRP6P59044 892 aa12.57□□□□□ -0.4
LINC00963-206ENST00000453213 ACSBG1Q96GR2 724 aa12.57□□□□□ -0.4
LINC00963-206ENST00000453213 CARD10Q9BWT7 1032 aa12.57□□□□□ -0.4
LINC00963-206ENST00000453213 AKAP12Q02952 1782 aa12.56□□□□□ -0.4
LINC00963-206ENST00000453213 KDM2AQ9Y2K7 1162 aa12.56□□□□□ -0.4
LINC00963-206ENST00000453213 AXIN2Q9Y2T1 843 aa12.56□□□□□ -0.4
LINC00963-206ENST00000453213 GOLGB1Q14789 3259 aaKnown RBP12.56□□□□□ -0.4
LINC00963-206ENST00000453213 BRD4O60885 1362 aaPredicted RBP12.56□□□□□ -0.4
LINC00963-206ENST00000453213 PAPPAQ13219 1627 aa12.55□□□□□ -0.4
LINC00963-206ENST00000453213 TOPAZ1Q8N9V7 1692 aa12.55□□□□□ -0.4
LINC00963-206ENST00000453213 AKT1S1Q96B36 256 aa12.55□□□□□ -0.4
LINC00963-206ENST00000453213 CAPN15O75808 1086 aa12.54□□□□□ -0.4
LINC00963-206ENST00000453213 APLP1P51693 650 aa12.54□□□□□ -0.4
LINC00963-206ENST00000453213 LRRC4BQ9NT99 713 aa12.54□□□□□ -0.4
LINC00963-206ENST00000453213 TFCP2L1Q9NZI6 479 aa12.54□□□□□ -0.4
LINC00963-206ENST00000453213 USP6P35125 1406 aa12.54□□□□□ -0.4
LINC00963-206ENST00000453213 TNS2Q63HR2 1409 aa12.54□□□□□ -0.4
LINC00963-206ENST00000453213 PNPLA7Q6ZV29 1317 aa12.53□□□□□ -0.4
LINC00963-206ENST00000453213 WNK3Q9BYP7 1800 aa12.53□□□□□ -0.4
LINC00963-206ENST00000453213 NHSQ6T4R5 1651 aa12.52□□□□□ -0.4
LINC00963-206ENST00000453213 SLC27A3Q5K4L6 730 aa12.52□□□□□ -0.41
LINC00963-206ENST00000453213 DCAF11Q8TEB1 546 aa12.52□□□□□ -0.41
LINC00963-206ENST00000453213 ADCY9O60503 1353 aa12.52□□□□□ -0.41
LINC00963-206ENST00000453213 CCDC7Q96M83 1385 aa12.52□□□□□ -0.41
LINC00963-206ENST00000453213 CPSF1Q10570 1443 aaKnown RBP12.52□□□□□ -0.41
LINC00963-206ENST00000453213 PPIP5K1Q6PFW1 1433 aa12.52□□□□□ -0.41
LINC00963-206ENST00000453213 SLIT3O75094 1523 aa12.52□□□□□ -0.41
LINC00963-206ENST00000453213 SRPK2P78362 688 aaKnown RBP12.51□□□□□ -0.41
LINC00963-206ENST00000453213 ARHGEF28Q8N1W1 1705 aaKnown RBP12.51□□□□□ -0.41
LINC00963-206ENST00000453213 ARHGEF25Q86VW2 580 aa12.5□□□□□ -0.41
LINC00963-206ENST00000453213 MSH5O43196 834 aa12.49□□□□□ -0.41
LINC00963-206ENST00000453213 KCNH5Q8NCM2 988 aa12.49□□□□□ -0.41
LINC00963-206ENST00000453213 STAC3Q96MF2 364 aa12.49□□□□□ -0.41
LINC00963-206ENST00000453213 COL18A1P39060 1754 aa12.48□□□□□ -0.41
LINC00963-206ENST00000453213 KIF3CO14782 793 aa12.48□□□□□ -0.41
LINC00963-206ENST00000453213 SOX12O15370 315 aa12.48□□□□□ -0.41
LINC00963-206ENST00000453213 COL13A1Q5TAT6 717 aaPredicted RBP12.48□□□□□ -0.41
LINC00963-206ENST00000453213 DNAJC5GQ8N7S2 189 aa12.48□□□□□ -0.41
LINC00963-206ENST00000453213 ABCC6O95255 1503 aa12.47□□□□□ -0.41
LINC00963-206ENST00000453213 TNS4Q8IZW8 715 aa12.47□□□□□ -0.41
LINC00963-206ENST00000453213 CABP2Q9NPB3 220 aa12.47□□□□□ -0.41
LINC00963-206ENST00000453213 COL24A1Q17RW2 1714 aa12.47□□□□□ -0.41
LINC00963-206ENST00000453213 IL2RBP14784 551 aa12.46□□□□□ -0.41
LINC00963-206ENST00000453213 PRELPP51888 382 aa12.46□□□□□ -0.41
LINC00963-206ENST00000453213 CABP1Q9NZU7 370 aa12.46□□□□□ -0.41
LINC00963-206ENST00000453213 CD2APQ9Y5K6 639 aa12.46□□□□□ -0.41
LINC00963-206ENST00000453213 TRPM1Q7Z4N2 1603 aa12.46□□□□□ -0.41
LINC00963-206ENST00000453213 BTAF1O14981 1849 aa12.46□□□□□ -0.42
LINC00963-206ENST00000453213 QSER1Q2KHR3 1735 aa12.45□□□□□ -0.42
LINC00963-206ENST00000453213 KCNQ4P56696 695 aa12.45□□□□□ -0.42
LINC00963-206ENST00000453213 MSL1Q68DK7 614 aa12.45□□□□□ -0.42
LINC00963-206ENST00000453213 NLRP2Q9NX02 1062 aa12.45□□□□□ -0.42
LINC00963-206ENST00000453213 TOMM70O94826 608 aa12.43□□□□□ -0.42
LINC00963-206ENST00000453213 COL23A1Q86Y22 540 aaPredicted RBP12.43□□□□□ -0.42
LINC00963-206ENST00000453213 SYTL4Q96C24 671 aaPredicted RBP12.42□□□□□ -0.42
LINC00963-206ENST00000453213 PIK3C2AO00443 1686 aa12.42□□□□□ -0.42
LINC00963-206ENST00000453213 DDX54Q8TDD1 881 aaKnown RBP12.41□□□□□ -0.42
LINC00963-206ENST00000453213 CCNL1Q9UK58 526 aaPredicted RBP12.41□□□□□ -0.42
LINC00963-206ENST00000453213 TTC21BQ7Z4L5 1316 aa12.4□□□□□ -0.42
LINC00963-206ENST00000453213 KLRG1Q96E93 195 aa12.4□□□□□ -0.42
LINC00963-206ENST00000453213 WWC3Q9ULE0 1092 aa12.4□□□□□ -0.42
LINC00963-206ENST00000453213 ERBB3P21860 1342 aa12.39□□□□□ -0.43
LINC00963-206ENST00000453213 IGSF1Q8N6C5 1336 aa12.39□□□□□ -0.43
LINC00963-206ENST00000453213 CENPJQ9HC77 1338 aaPredicted RBP12.39□□□□□ -0.43
LINC00963-206ENST00000453213 RGPD5Q99666 1765 aa12.39□□□□□ -0.43
LINC00963-206ENST00000453213 PRIM1P49642 420 aaKnown RBP12.39□□□□□ -0.43
LINC00963-206ENST00000453213 JMYQ8N9B5 988 aa12.39□□□□□ -0.43
LINC00963-206ENST00000453213 ZNF692Q9BU19 519 aaPredicted RBP12.39□□□□□ -0.43
LINC00963-206ENST00000453213 TTC21AQ8NDW8 1320 aa12.38□□□□□ -0.43
LINC00963-206ENST00000453213 NFAT5O94916 1531 aa12.38□□□□□ -0.43
LINC00963-206ENST00000453213 TUBGCP6Q96RT7 1819 aa12.38□□□□□ -0.43
LINC00963-206ENST00000453213 QRICH2Q9H0J4 1663 aa12.38□□□□□ -0.43
LINC00963-206ENST00000453213 FLAD1Q8NFF5 587 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms