RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 LMOD1P29536 600 aaPredicted RBP7.55□□□□□ -1.2
VPS8-211ENST00000452140 RPIAP49247 311 aa7.55□□□□□ -1.2
VPS8-211ENST00000452140 ERFEQ4G0M1 354 aa7.55□□□□□ -1.2
VPS8-211ENST00000452140 BPHLQ86WA6 291 aaPredicted RBP7.55□□□□□ -1.2
VPS8-211ENST00000452140 ZNF775Q96BV0 537 aaPredicted RBP7.55□□□□□ -1.2
VPS8-211ENST00000452140 SKOR1P84550 965 aa7.54□□□□□ -1.2
VPS8-211ENST00000452140 DZIP3Q86Y13 1208 aaKnown RBP7.54□□□□□ -1.2
VPS8-211ENST00000452140 FAM174AQ8TBP5 190 aa7.54□□□□□ -1.2
VPS8-211ENST00000452140 CEP126Q9P2H0 1117 aa7.53□□□□□ -1.2
VPS8-211ENST00000452140 MAFBQ9Y5Q3 323 aaPredicted RBP7.53□□□□□ -1.2
VPS8-211ENST00000452140 SKIP12755 728 aa7.52□□□□□ -1.21
VPS8-211ENST00000452140 FOXC1Q12948 553 aa7.52□□□□□ -1.21
VPS8-211ENST00000452140 CDCA8Q53HL2 280 aa7.52□□□□□ -1.21
VPS8-211ENST00000452140 ATP9BO43861 1147 aa7.51□□□□□ -1.21
VPS8-211ENST00000452140 SLFNL1Q499Z3 407 aa7.51□□□□□ -1.21
VPS8-211ENST00000452140 DEPDC4Q8N2C3 294 aa7.51□□□□□ -1.21
VPS8-211ENST00000452140 SLC10A4Q96EP9 437 aa7.51□□□□□ -1.21
VPS8-211ENST00000452140 PKD2L1Q9P0L9 805 aa7.51□□□□□ -1.21
VPS8-211ENST00000452140 GIGYF1O75420 1035 aaPredicted RBP7.5□□□□□ -1.21
VPS8-211ENST00000452140 RNF135Q8IUD6 432 aa7.5□□□□□ -1.21
VPS8-211ENST00000452140 PBXIP1Q96AQ6 731 aa7.5□□□□□ -1.21
VPS8-211ENST00000452140 C1QTNF2Q9BXJ5 285 aa7.5□□□□□ -1.21
VPS8-211ENST00000452140 USP17L3A6NCW0 530 aa7.49□□□□□ -1.21
VPS8-211ENST00000452140 USP17L4A6NCW7 530 aa7.49□□□□□ -1.21
VPS8-211ENST00000452140 USP17L5A8MUK1 530 aa7.49□□□□□ -1.21
VPS8-211ENST00000452140 RAB15P59190 212 aa7.49□□□□□ -1.21
VPS8-211ENST00000452140 TSGA10IPQ3SY00 556 aa7.49□□□□□ -1.21
VPS8-211ENST00000452140 USP17L2Q6R6M4 530 aa7.49□□□□□ -1.21
VPS8-211ENST00000452140 USP17L1Q7RTZ2 530 aa7.49□□□□□ -1.21
VPS8-211ENST00000452140 RETREG2Q8NC44 543 aa7.49□□□□□ -1.21
VPS8-211ENST00000452140 AAASQ9NRG9 546 aa7.49□□□□□ -1.21
VPS8-211ENST00000452140 WNT7BP56706 349 aa7.48□□□□□ -1.21
VPS8-211ENST00000452140 SRPK2P78362 688 aaKnown RBP7.48□□□□□ -1.21
VPS8-211ENST00000452140 CYP4X1Q8N118 509 aa7.48□□□□□ -1.21
VPS8-211ENST00000452140 PHTF2Q8N3S3 785 aa7.48□□□□□ -1.21
VPS8-211ENST00000452140 EHBP1Q8NDI1 1231 aa7.48□□□□□ -1.21
VPS8-211ENST00000452140 ZNF592Q92610 1267 aa7.48□□□□□ -1.21
VPS8-211ENST00000452140 POTECB2RU33 542 aa7.47□□□□□ -1.21
VPS8-211ENST00000452140 PPP1R15AO75807 674 aaPredicted RBP7.47□□□□□ -1.21
VPS8-211ENST00000452140 MCCD1P59942 119 aaPredicted RBP7.47□□□□□ -1.21
VPS8-211ENST00000452140 ARID5BQ14865 1188 aa7.47□□□□□ -1.21
VPS8-211ENST00000452140 RC3H1Q5TC82 1133 aaKnown RBP7.47□□□□□ -1.21
VPS8-211ENST00000452140 CRIPAKQ8N1N5 446 aa7.47□□□□□ -1.21
VPS8-211ENST00000452140 PLPP7Q8NBV4 271 aa7.47□□□□□ -1.21
VPS8-211ENST00000452140 NFATC2IPQ8NCF5 419 aa7.47□□□□□ -1.21
VPS8-211ENST00000452140 CCDC85AQ96PX6 553 aaPredicted RBP7.47□□□□□ -1.21
VPS8-211ENST00000452140 TLL2Q9Y6L7 1015 aa7.47□□□□□ -1.21
VPS8-211ENST00000452140 ST8SIA5O15466 376 aa7.46□□□□□ -1.22
VPS8-211ENST00000452140 VARSP26640 1264 aaKnown RBP7.46□□□□□ -1.22
VPS8-211ENST00000452140 NCOA4Q13772 614 aa7.46□□□□□ -1.22
VPS8-211ENST00000452140 TRMT44Q8IYL2 757 aaKnown RBP7.46□□□□□ -1.22
VPS8-211ENST00000452140 TOR4AQ9NXH8 423 aa7.46□□□□□ -1.22
VPS8-211ENST00000452140 AVPP01185 164 aa7.45□□□□□ -1.22
VPS8-211ENST00000452140 CTC1Q2NKJ3 1217 aa7.45□□□□□ -1.22
VPS8-211ENST00000452140 NBPF20Q3BBV1 942 aa7.45□□□□□ -1.22
VPS8-211ENST00000452140 OXLD1Q5BKU9 147 aa7.45□□□□□ -1.22
VPS8-211ENST00000452140 VASH1Q7L8A9 365 aaPredicted RBP7.45□□□□□ -1.22
VPS8-211ENST00000452140 KCTD15Q96SI1 283 aaPredicted RBP7.45□□□□□ -1.22
VPS8-211ENST00000452140 TTC24A2A3L6 582 aaPredicted RBP7.44□□□□□ -1.22
VPS8-211ENST00000452140 CARNS1A5YM72 827 aa7.44□□□□□ -1.22
VPS8-211ENST00000452140 AXIN1O15169 862 aa7.44□□□□□ -1.22
VPS8-211ENST00000452140 KANK4Q5T7N3 995 aaPredicted RBP7.44□□□□□ -1.22
VPS8-211ENST00000452140 PLEKHM2Q8IWE5 1019 aa7.44□□□□□ -1.22
VPS8-211ENST00000452140 CDCA7Q9BWT1 371 aaPredicted RBP7.44□□□□□ -1.22
VPS8-211ENST00000452140 VRTNQ9H8Y1 702 aa7.44□□□□□ -1.22
VPS8-211ENST00000452140 DOLKQ9UPQ8 538 aa7.44□□□□□ -1.22
VPS8-211ENST00000452140 ACIN1Q9UKV3 1341 aaKnown RBP7.44□□□□□ -1.22
VPS8-211ENST00000452140 PDIA4P13667 645 aaKnown RBP7.43□□□□□ -1.22
VPS8-211ENST00000452140 MRGPRX2Q96LB1 330 aa7.43□□□□□ -1.22
VPS8-211ENST00000452140 MKRN1Q9UHC7 482 aaKnown RBP7.43□□□□□ -1.22
VPS8-211ENST00000452140 PCDHB11Q9Y5F2 797 aa7.43□□□□□ -1.22
VPS8-211ENST00000452140 ESPNB1AK53 854 aa7.42□□□□□ -1.22
VPS8-211ENST00000452140 FSHRP23945 695 aa7.42□□□□□ -1.22
VPS8-211ENST00000452140 EML3Q32P44 896 aa7.42□□□□□ -1.22
VPS8-211ENST00000452140 INTS6LQ5JSJ4 861 aaKnown RBP7.42□□□□□ -1.22
VPS8-211ENST00000452140 CHIC2Q9UKJ5 165 aa7.42□□□□□ -1.22
VPS8-211ENST00000452140 WNT7AO00755 349 aa7.41□□□□□ -1.22
VPS8-211ENST00000452140 SMCPP49901 116 aaPredicted RBP7.41□□□□□ -1.22
VPS8-211ENST00000452140 MAP7D1Q3KQU3 841 aa7.41□□□□□ -1.22
VPS8-211ENST00000452140 CRTC2Q53ET0 693 aaPredicted RBP7.41□□□□□ -1.22
VPS8-211ENST00000452140 RNF20Q5VTR2 975 aa7.41□□□□□ -1.22
VPS8-211ENST00000452140 CDV3Q9UKY7 258 aaKnown RBP7.41□□□□□ -1.22
VPS8-211ENST00000452140 C11orf95C9JLR9 678 aaPredicted RBP7.4□□□□□ -1.22
VPS8-211ENST00000452140 SIAH2O43255 324 aa7.4□□□□□ -1.22
VPS8-211ENST00000452140 ATG7O95352 703 aa7.4□□□□□ -1.22
VPS8-211ENST00000452140 CSB-PGBD3P0DP91 1061 aa7.4□□□□□ -1.22
VPS8-211ENST00000452140 RASA1P20936 1047 aa7.4□□□□□ -1.22
VPS8-211ENST00000452140 TREML4Q6UXN2 200 aa7.4□□□□□ -1.22
VPS8-211ENST00000452140 SNIP1Q8TAD8 396 aaKnown RBP7.4□□□□□ -1.22
VPS8-211ENST00000452140 ZMIZ1Q9ULJ6 1067 aa7.4□□□□□ -1.22
VPS8-211ENST00000452140 MAP4K5Q9Y4K4 846 aa7.4□□□□□ -1.22
VPS8-211ENST00000452140 USP17L15C9J2P7 530 aa7.39□□□□□ -1.23
VPS8-211ENST00000452140 USP17L10C9JJH3 530 aa7.39□□□□□ -1.23
VPS8-211ENST00000452140 USP17L13C9JLJ4 530 aa7.39□□□□□ -1.23
VPS8-211ENST00000452140 USP17L12C9JPN9 530 aa7.39□□□□□ -1.23
VPS8-211ENST00000452140 USP17L11C9JVI0 530 aa7.39□□□□□ -1.23
VPS8-211ENST00000452140 USP17L21D6R901 530 aa7.39□□□□□ -1.23
VPS8-211ENST00000452140 USP17L18D6R9N7 530 aa7.39□□□□□ -1.23
VPS8-211ENST00000452140 USP17L22D6RA61 530 aa7.39□□□□□ -1.23
VPS8-211ENST00000452140 USP17L17D6RBQ6 530 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms