RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 EMILIN1Q9Y6C2 1016 aa32.73■■■□□ 2.83
CPSF4-207ENST00000451876 AXIN2Q9Y2T1 843 aa32.73■■■□□ 2.83
CPSF4-207ENST00000451876 PARD3Q8TEW0 1356 aa32.7■■■□□ 2.83
CPSF4-207ENST00000451876 POLKQ9UBT6 870 aa32.7■■■□□ 2.83
CPSF4-207ENST00000451876 COL5A2P05997 1499 aaPredicted RBP32.7■■■□□ 2.82
CPSF4-207ENST00000451876 SMG6Q86US8 1419 aaKnown RBP32.69■■■□□ 2.82
CPSF4-207ENST00000451876 RTL1A6NKG5 1358 aa32.69■■■□□ 2.82
CPSF4-207ENST00000451876 USP21Q9UK80 565 aa32.68■■■□□ 2.82
CPSF4-207ENST00000451876 HOXC9P31274 260 aa32.67■■■□□ 2.82
CPSF4-207ENST00000451876 AMPHP49418 695 aa32.67■■■□□ 2.82
CPSF4-207ENST00000451876 RGS17Q9UGC6 210 aaPredicted RBP32.67■■■□□ 2.82
CPSF4-207ENST00000451876 PPM1GO15355 546 aaPredicted RBP32.66■■■□□ 2.82
CPSF4-207ENST00000451876 IP6K1Q92551 441 aa32.66■■■□□ 2.82
CPSF4-207ENST00000451876 FLT4P35916 1363 aa32.66■■■□□ 2.82
CPSF4-207ENST00000451876 PHF23Q9BUL5 403 aaPredicted RBP32.66■■■□□ 2.82
CPSF4-207ENST00000451876 KIF24Q5T7B8 1368 aa32.65■■■□□ 2.82
CPSF4-207ENST00000451876 BLMP54132 1417 aaPredicted RBP32.65■■■□□ 2.82
CPSF4-207ENST00000451876 UNC5CLQ8IV45 518 aa32.64■■■□□ 2.82
CPSF4-207ENST00000451876 STRN4Q9NRL3 753 aa32.62■■■□□ 2.81
CPSF4-207ENST00000451876 CDK12Q9NYV4 1490 aaPredicted RBP32.62■■■□□ 2.81
CPSF4-207ENST00000451876 HSP90AB2PQ58FF8 381 aa32.62■■■□□ 2.81
CPSF4-207ENST00000451876 RGPD2P0DJD1 1756 aa32.61■■■□□ 2.81
CPSF4-207ENST00000451876 ERBB3P21860 1342 aa32.59■■■□□ 2.81
CPSF4-207ENST00000451876 PPP2R1AP30153 589 aa32.59■■■□□ 2.81
CPSF4-207ENST00000451876 MTHFSP49914 203 aa32.59■■■□□ 2.81
CPSF4-207ENST00000451876 ATRNO75882 1429 aa32.59■■■□□ 2.81
CPSF4-207ENST00000451876 INSRP06213 1382 aa32.59■■■□□ 2.81
CPSF4-207ENST00000451876 ZNF772Q68DY9 489 aaPredicted RBP32.59■■■□□ 2.81
CPSF4-207ENST00000451876 PRKRIP1Q9H875 184 aaPredicted RBP32.59■■■□□ 2.81
CPSF4-207ENST00000451876 FAM208AQ9UK61 1670 aaKnown RBP32.58■■■□□ 2.81
CPSF4-207ENST00000451876 RALBP1Q15311 655 aa32.57■■■□□ 2.8
CPSF4-207ENST00000451876 EVA1CP58658 441 aa32.56■■■□□ 2.8
CPSF4-207ENST00000451876 LARP1Q6PKG0 1096 aaKnown RBP32.56■■■□□ 2.8
CPSF4-207ENST00000451876 ANKRD24Q8TF21 1146 aa32.56■■■□□ 2.8
CPSF4-207ENST00000451876 WDR17Q8IZU2 1322 aa32.56■■■□□ 2.8
CPSF4-207ENST00000451876 LTV1Q96GA3 475 aaPredicted RBP32.55■■■□□ 2.8
CPSF4-207ENST00000451876 GLI3P10071 1580 aa32.55■■■□□ 2.8
CPSF4-207ENST00000451876 VPS72Q15906 364 aa32.53■■■□□ 2.8
CPSF4-207ENST00000451876 QTRT2Q9H974 415 aaKnown RBP32.53■■■□□ 2.8
CPSF4-207ENST00000451876 TRPC5Q9UL62 973 aaPredicted RBP32.53■■■□□ 2.8
CPSF4-207ENST00000451876 CRB1P82279 1406 aa32.52■■■□□ 2.8
CPSF4-207ENST00000451876 POTEAQ6S8J7 498 aa32.52■■■□□ 2.8
CPSF4-207ENST00000451876 CSB-PGBD3P0DP91 1061 aa32.51■■■□□ 2.8
CPSF4-207ENST00000451876 COL3A1P02461 1466 aaPredicted RBP32.51■■■□□ 2.8
CPSF4-207ENST00000451876 CCDC9Q9Y3X0 531 aaKnown RBP32.49■■■□□ 2.79
CPSF4-207ENST00000451876 SPATA31A5Q5VU36 1347 aa32.49■■■□□ 2.79
CPSF4-207ENST00000451876 SPATA31A7Q8IWB4 1347 aa32.49■■■□□ 2.79
CPSF4-207ENST00000451876 MYBBP1AQ9BQG0 1328 aaKnown RBP32.49■■■□□ 2.79
CPSF4-207ENST00000451876 WNK3Q9BYP7 1800 aa32.48■■■□□ 2.79
CPSF4-207ENST00000451876 TOM1L2Q6ZVM7 507 aa32.48■■■□□ 2.79
CPSF4-207ENST00000451876 EIF4A2Q14240 407 aaKnown RBP32.48■■■□□ 2.79
CPSF4-207ENST00000451876 USP35Q9P2H5 1018 aa32.48■■■□□ 2.79
CPSF4-207ENST00000451876 GJD4Q96KN9 370 aaPredicted RBP32.47■■■□□ 2.79
CPSF4-207ENST00000451876 SPATA31A1Q5TZJ5 1347 aa32.47■■■□□ 2.79
CPSF4-207ENST00000451876 ANP32CO43423 234 aa32.46■■■□□ 2.79
CPSF4-207ENST00000451876 RGPD1P0DJD0 1748 aa32.45■■■□□ 2.79
CPSF4-207ENST00000451876 NLRP2Q9NX02 1062 aa32.44■■■□□ 2.78
CPSF4-207ENST00000451876 NBPF6Q5VWK0 638 aa32.42■■■□□ 2.78
CPSF4-207ENST00000451876 NBPF4Q96M43 638 aa32.42■■■□□ 2.78
CPSF4-207ENST00000451876 CARD10Q9BWT7 1032 aa32.41■■■□□ 2.78
CPSF4-207ENST00000451876 DIEXFQ68CQ4 756 aaKnown RBP32.4■■■□□ 2.78
CPSF4-207ENST00000451876 IL13P35225 146 aa32.4■■■□□ 2.78
CPSF4-207ENST00000451876 RBM6P78332 1123 aaKnown RBP32.39■■■□□ 2.78
CPSF4-207ENST00000451876 USHBP1Q8N6Y0 703 aa32.39■■■□□ 2.78
CPSF4-207ENST00000451876 THSD7AQ9UPZ6 1657 aa32.38■■■□□ 2.77
CPSF4-207ENST00000451876 TCP11L2Q8N4U5 519 aa32.37■■■□□ 2.77
CPSF4-207ENST00000451876 CFAP53Q96M91 514 aa32.37■■■□□ 2.77
CPSF4-207ENST00000451876 EYA1Q99502 592 aa32.37■■■□□ 2.77
CPSF4-207ENST00000451876 NCAPD2Q15021 1401 aa32.37■■■□□ 2.77
CPSF4-207ENST00000451876 DIAPH1O60610 1272 aaKnown RBP32.37■■■□□ 2.77
CPSF4-207ENST00000451876 RXRBP28702 533 aa32.37■■■□□ 2.77
CPSF4-207ENST00000451876 FAM98CQ17RN3 349 aaKnown RBP32.36■■■□□ 2.77
CPSF4-207ENST00000451876 IGSF1Q8N6C5 1336 aa32.34■■■□□ 2.77
CPSF4-207ENST00000451876 THRAP3Q9Y2W1 955 aaKnown RBP32.33■■■□□ 2.77
CPSF4-207ENST00000451876 PARP4Q9UKK3 1724 aaKnown RBP32.33■■■□□ 2.77
CPSF4-207ENST00000451876 DISP2A7MBM2 1401 aa32.33■■■□□ 2.77
CPSF4-207ENST00000451876 RGS12O14924 1447 aa32.32■■■□□ 2.76
CPSF4-207ENST00000451876 BARGINQ6ZT62 677 aa32.32■■■□□ 2.76
CPSF4-207ENST00000451876 LRRC37A3O60309 1634 aa32.31■■■□□ 2.76
CPSF4-207ENST00000451876 BRWD3Q6RI45 1802 aa32.31■■■□□ 2.76
CPSF4-207ENST00000451876 MEGF6O75095 1541 aa32.31■■■□□ 2.76
CPSF4-207ENST00000451876 ONECUT3O60422 494 aaPredicted RBP32.29■■■□□ 2.76
CPSF4-207ENST00000451876 CCDC184Q52MB2 194 aa32.29■■■□□ 2.76
CPSF4-207ENST00000451876 AEBP1Q8IUX7 1158 aa32.28■■■□□ 2.76
CPSF4-207ENST00000451876 U2SURPO15042 1029 aaKnown RBP32.26■■■□□ 2.76
CPSF4-207ENST00000451876 KDRP35968 1356 aa32.25■■■□□ 2.75
CPSF4-207ENST00000451876 A0A0G2JS52 829 aa32.25■■■□□ 2.75
CPSF4-207ENST00000451876 IL2RBP14784 551 aa32.25■■■□□ 2.75
CPSF4-207ENST00000451876 MYT1Q01538 1121 aa32.25■■■□□ 2.75
CPSF4-207ENST00000451876 SHANK3Q9BYB0 1731 aa32.24■■■□□ 2.75
CPSF4-207ENST00000451876 SULT6B1Q6IMI4 303 aa32.24■■■□□ 2.75
CPSF4-207ENST00000451876 SEPT12Q8IYM1 358 aa32.23■■■□□ 2.75
CPSF4-207ENST00000451876 HMOX1P09601 288 aa32.22■■■□□ 2.75
CPSF4-207ENST00000451876 NUDCQ9Y266 331 aa32.22■■■□□ 2.75
CPSF4-207ENST00000451876 OVOS2A0A0G2JMS6 1433 aa32.22■■■□□ 2.75
CPSF4-207ENST00000451876 PKD1L3Q7Z443 1732 aa32.22■■■□□ 2.75
CPSF4-207ENST00000451876 CDCA7Q9BWT1 371 aaPredicted RBP32.2■■■□□ 2.75
CPSF4-207ENST00000451876 RAPGEF4Q8WZA2 1011 aa32.19■■■□□ 2.74
CPSF4-207ENST00000451876 EP400Q96L91 3159 aa32.18■■■□□ 2.74
CPSF4-207ENST00000451876 TNS2Q63HR2 1409 aa32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms