RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 A0A0G2JS52 829 aa12.4□□□□□ -0.42
RFX3-209ENST00000451859 FAM83GA6ND36 823 aa12.4□□□□□ -0.42
RFX3-209ENST00000451859 MYT1Q01538 1121 aa12.4□□□□□ -0.42
RFX3-209ENST00000451859 NBPF8Q3BBV2 869 aa12.4□□□□□ -0.42
RFX3-209ENST00000451859 BTG4Q9NY30 223 aa12.4□□□□□ -0.42
RFX3-209ENST00000451859 PCDH10Q9P2E7 1040 aa12.4□□□□□ -0.42
RFX3-209ENST00000451859 POLR3AO14802 1390 aaPredicted RBP12.4□□□□□ -0.42
RFX3-209ENST00000451859 ATN1P54259 1190 aaPredicted RBP12.38□□□□□ -0.43
RFX3-209ENST00000451859 VPS72Q15906 364 aa12.38□□□□□ -0.43
RFX3-209ENST00000451859 PRDM11Q9NQV5 511 aa12.38□□□□□ -0.43
RFX3-209ENST00000451859 PIK3C2AO00443 1686 aa12.38□□□□□ -0.43
RFX3-209ENST00000451859 PLEKHG3A1L390 1219 aa12.37□□□□□ -0.43
RFX3-209ENST00000451859 ZC3H6P61129 1189 aaKnown RBP12.37□□□□□ -0.43
RFX3-209ENST00000451859 CHRNA2Q15822 529 aa12.37□□□□□ -0.43
RFX3-209ENST00000451859 MAMSTRQ6ZN01 415 aa12.37□□□□□ -0.43
RFX3-209ENST00000451859 ABTB2Q8N961 1025 aa12.37□□□□□ -0.43
RFX3-209ENST00000451859 KIAA0232Q92628 1395 aa12.37□□□□□ -0.43
RFX3-209ENST00000451859 RGPD5Q99666 1765 aa12.37□□□□□ -0.43
RFX3-209ENST00000451859 EVC2Q86UK5 1308 aa12.37□□□□□ -0.43
RFX3-209ENST00000451859 POTEFA5A3E0 1075 aa12.36□□□□□ -0.43
RFX3-209ENST00000451859 PROM2Q8N271 834 aa12.36□□□□□ -0.43
RFX3-209ENST00000451859 CABP1Q9NZU7 370 aa12.36□□□□□ -0.43
RFX3-209ENST00000451859 MON2Q7Z3U7 1717 aa12.36□□□□□ -0.43
RFX3-209ENST00000451859 ZBTB7CA1YPR0 619 aa12.35□□□□□ -0.43
RFX3-209ENST00000451859 SEPT12Q8IYM1 358 aa12.35□□□□□ -0.43
RFX3-209ENST00000451859 CARD11Q9BXL7 1154 aa12.35□□□□□ -0.43
RFX3-209ENST00000451859 TSPYL2Q9H2G4 693 aaPredicted RBP12.35□□□□□ -0.43
RFX3-209ENST00000451859 STRN4Q9NRL3 753 aa12.35□□□□□ -0.43
RFX3-209ENST00000451859 FAM98CQ17RN3 349 aaKnown RBP12.34□□□□□ -0.43
RFX3-209ENST00000451859 USP6P35125 1406 aa12.34□□□□□ -0.43
RFX3-209ENST00000451859 LMO7Q8WWI1 1683 aa12.33□□□□□ -0.44
RFX3-209ENST00000451859 KIF12Q96FN5 646 aa12.33□□□□□ -0.44
RFX3-209ENST00000451859 THSD7AQ9UPZ6 1657 aa12.32□□□□□ -0.44
RFX3-209ENST00000451859 KRT27Q7Z3Y8 459 aa12.31□□□□□ -0.44
RFX3-209ENST00000451859 NLRP13Q86W25 1043 aa12.31□□□□□ -0.44
RFX3-209ENST00000451859 USP35Q9P2H5 1018 aa12.31□□□□□ -0.44
RFX3-209ENST00000451859 TRPC6Q9Y210 931 aa12.31□□□□□ -0.44
RFX3-209ENST00000451859 CAMTA1Q9Y6Y1 1673 aa12.31□□□□□ -0.44
RFX3-209ENST00000451859 USP19O94966 1318 aa12.31□□□□□ -0.44
RFX3-209ENST00000451859 RGPD1P0DJD0 1748 aa12.31□□□□□ -0.44
RFX3-209ENST00000451859 LTN1O94822 1766 aa12.3□□□□□ -0.44
RFX3-209ENST00000451859 WNK3Q9BYP7 1800 aa12.3□□□□□ -0.44
RFX3-209ENST00000451859 NLRP6P59044 892 aa12.3□□□□□ -0.44
RFX3-209ENST00000451859 SLIT3O75094 1523 aa12.3□□□□□ -0.44
RFX3-209ENST00000451859 SPATA31A5Q5VU36 1347 aa12.3□□□□□ -0.44
RFX3-209ENST00000451859 SPATA31A7Q8IWB4 1347 aa12.3□□□□□ -0.44
RFX3-209ENST00000451859 COL18A1P39060 1754 aa12.29□□□□□ -0.44
RFX3-209ENST00000451859 SOX12O15370 315 aa12.29□□□□□ -0.44
RFX3-209ENST00000451859 EVA1CP58658 441 aa12.29□□□□□ -0.44
RFX3-209ENST00000451859 FAM182BQ5T319 152 aa12.29□□□□□ -0.44
RFX3-209ENST00000451859 BMP2KQ9NSY1 1161 aaPredicted RBP12.29□□□□□ -0.44
RFX3-209ENST00000451859 BLMP54132 1417 aaPredicted RBP12.28□□□□□ -0.44
RFX3-209ENST00000451859 SSH2Q76I76 1423 aa12.28□□□□□ -0.44
RFX3-209ENST00000451859 TNS1Q9HBL0 1735 aaKnown RBP12.28□□□□□ -0.44
RFX3-209ENST00000451859 GCP02774 474 aa12.28□□□□□ -0.44
RFX3-209ENST00000451859 TMC1Q8TDI8 760 aa12.28□□□□□ -0.44
RFX3-209ENST00000451859 PCGF6Q9BYE7 350 aa12.28□□□□□ -0.44
RFX3-209ENST00000451859 BRD4O60885 1362 aaPredicted RBP12.28□□□□□ -0.44
RFX3-209ENST00000451859 KTN1Q86UP2 1357 aaKnown RBP12.28□□□□□ -0.44
RFX3-209ENST00000451859 SBNO2Q9Y2G9 1366 aa12.28□□□□□ -0.44
RFX3-209ENST00000451859 ONECUT3O60422 494 aaPredicted RBP12.27□□□□□ -0.45
RFX3-209ENST00000451859 SF3B2Q13435 895 aaKnown RBP12.27□□□□□ -0.45
RFX3-209ENST00000451859 FAM163AQ96GL9 167 aaPredicted RBP12.27□□□□□ -0.45
RFX3-209ENST00000451859 SCUBE2Q9NQ36 999 aa12.27□□□□□ -0.45
RFX3-209ENST00000451859 SPATA31A1Q5TZJ5 1347 aa12.27□□□□□ -0.45
RFX3-209ENST00000451859 TTC21BQ7Z4L5 1316 aa12.27□□□□□ -0.45
RFX3-209ENST00000451859 CPDO75976 1380 aa12.27□□□□□ -0.45
RFX3-209ENST00000451859 COL5A2P05997 1499 aaPredicted RBP12.27□□□□□ -0.45
RFX3-209ENST00000451859 LARP1Q6PKG0 1096 aaKnown RBP12.26□□□□□ -0.45
RFX3-209ENST00000451859 DEFB132Q7Z7B7 95 aa12.26□□□□□ -0.45
RFX3-209ENST00000451859 CCDC125Q86Z20 511 aa12.26□□□□□ -0.45
RFX3-209ENST00000451859 CPSF1Q10570 1443 aaKnown RBP12.26□□□□□ -0.45
RFX3-209ENST00000451859 PARP4Q9UKK3 1724 aaKnown RBP12.25□□□□□ -0.45
RFX3-209ENST00000451859 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.25□□□□□ -0.458e-7■■■□□ 18.5
RFX3-209ENST00000451859 USP54Q70EL1 1684 aa12.25□□□□□ -0.45
RFX3-209ENST00000451859 SBF2Q86WG5 1849 aa12.24□□□□□ -0.45
RFX3-209ENST00000451859 KAT6BQ8WYB5 2073 aa12.24□□□□□ -0.45
RFX3-209ENST00000451859 CD163L1Q9NR16 1453 aa12.24□□□□□ -0.45
RFX3-209ENST00000451859 LRRC37A3O60309 1634 aa12.23□□□□□ -0.45
RFX3-209ENST00000451859 NFAT5O94916 1531 aa12.23□□□□□ -0.45
RFX3-209ENST00000451859 TTC21AQ8NDW8 1320 aa12.23□□□□□ -0.45
RFX3-209ENST00000451859 ST20-MTHFSA0A0A6YYL1 179 aa12.23□□□□□ -0.45
RFX3-209ENST00000451859 SLC12A5Q9H2X9 1139 aa12.23□□□□□ -0.45
RFX3-209ENST00000451859 MAP3K13O43283 966 aa12.22□□□□□ -0.45
RFX3-209ENST00000451859 HDGFL2Q7Z4V5 671 aaPredicted RBP12.22□□□□□ -0.45
RFX3-209ENST00000451859 NME9Q86XW9 330 aa12.22□□□□□ -0.45
RFX3-209ENST00000451859 KIF20BQ96Q89 1820 aa12.22□□□□□ -0.45
RFX3-209ENST00000451859 CRB1P82279 1406 aa12.21□□□□□ -0.45
RFX3-209ENST00000451859 A0A1W2PP64 1363 aa12.21□□□□□ -0.45
RFX3-209ENST00000451859 AATKQ6ZMQ8 1374 aa12.21□□□□□ -0.45
RFX3-209ENST00000451859 USP47Q96K76 1375 aa12.21□□□□□ -0.45
RFX3-209ENST00000451859 TIE1P35590 1138 aa12.21□□□□□ -0.45
RFX3-209ENST00000451859 TCP11L2Q8N4U5 519 aa12.21□□□□□ -0.45
RFX3-209ENST00000451859 BAG6P46379 1132 aa12.2□□□□□ -0.46
RFX3-209ENST00000451859 TOM1L2Q6ZVM7 507 aa12.2□□□□□ -0.46
RFX3-209ENST00000451859 KCNH5Q8NCM2 988 aa12.2□□□□□ -0.46
RFX3-209ENST00000451859 RGPD2P0DJD1 1756 aa12.2□□□□□ -0.46
RFX3-209ENST00000451859 EDC4Q6P2E9 1401 aaKnown RBP12.2□□□□□ -0.46
RFX3-209ENST00000451859 SRCAPQ6ZRS2 3230 aa12.19□□□□□ -0.46
RFX3-209ENST00000451859 TRIM37O94972 964 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms