RNA–Protein interactions for RNA: ENST00000451506.5

PTPRN-209, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-209ENST00000451506 PLSCR1O15162 318 aa24.56■■□□□ 1.52
PTPRN-209ENST00000451506 ZNF692Q9BU19 519 aaPredicted RBP24.56■■□□□ 1.52
PTPRN-209ENST00000451506 SBF2Q86WG5 1849 aa24.56■■□□□ 1.52
PTPRN-209ENST00000451506 WNK3Q9BYP7 1800 aa24.54■■□□□ 1.52
PTPRN-209ENST00000451506 PTF1AQ7RTS3 328 aa24.54■■□□□ 1.52
PTPRN-209ENST00000451506 KCNH5Q8NCM2 988 aa24.54■■□□□ 1.52
PTPRN-209ENST00000451506 SIN3AQ96ST3 1273 aa24.54■■□□□ 1.52
PTPRN-209ENST00000451506 AKAP12Q02952 1782 aa24.53■■□□□ 1.52
PTPRN-209ENST00000451506 MARCH10Q8NA82 808 aaPredicted RBP24.53■■□□□ 1.52
PTPRN-209ENST00000451506 BCL11BQ9C0K0 894 aaPredicted RBP24.53■■□□□ 1.52
PTPRN-209ENST00000451506 SPON1Q9HCB6 807 aa24.53■■□□□ 1.52
PTPRN-209ENST00000451506 ROCK2O75116 1388 aaKnown RBP24.53■■□□□ 1.52
PTPRN-209ENST00000451506 BCL9O00512 1426 aa24.52■■□□□ 1.52
PTPRN-209ENST00000451506 KCNQ2O43526 872 aa24.52■■□□□ 1.52
PTPRN-209ENST00000451506 CDCA7Q9BWT1 371 aaPredicted RBP24.52■■□□□ 1.52
PTPRN-209ENST00000451506 TTC21AQ8NDW8 1320 aa24.52■■□□□ 1.52
PTPRN-209ENST00000451506 CARD10Q9BWT7 1032 aa24.51■■□□□ 1.51
PTPRN-209ENST00000451506 NFAT5O94916 1531 aa24.51■■□□□ 1.51
PTPRN-209ENST00000451506 ANO8Q9HCE9 1232 aaPredicted RBP24.49■■□□□ 1.51
PTPRN-209ENST00000451506 RGPD5Q99666 1765 aa24.49■■□□□ 1.51
PTPRN-209ENST00000451506 SOX12O15370 315 aa24.48■■□□□ 1.51
PTPRN-209ENST00000451506 PROM2Q8N271 834 aa24.48■■□□□ 1.51
PTPRN-209ENST00000451506 KTN1Q86UP2 1357 aaKnown RBP24.47■■□□□ 1.51
PTPRN-209ENST00000451506 CSB-PGBD3P0DP91 1061 aa24.46■■□□□ 1.51
PTPRN-209ENST00000451506 PPP1R1BQ9UD71 204 aaPredicted RBP24.46■■□□□ 1.51
PTPRN-209ENST00000451506 ABCC6O95255 1503 aa24.45■■□□□ 1.51
PTPRN-209ENST00000451506 NINLQ9Y2I6 1382 aa24.45■■□□□ 1.5
PTPRN-209ENST00000451506 CASZ1Q86V15 1759 aa24.45■■□□□ 1.5
PTPRN-209ENST00000451506 NEUROD1Q13562 356 aa24.45■■□□□ 1.5
PTPRN-209ENST00000451506 MON2Q7Z3U7 1717 aa24.44■■□□□ 1.5
PTPRN-209ENST00000451506 CCDC7Q96M83 1385 aa24.43■■□□□ 1.5
PTPRN-209ENST00000451506 SBNO2Q9Y2G9 1366 aa24.42■■□□□ 1.5
PTPRN-209ENST00000451506 EXOC5O00471 708 aa24.42■■□□□ 1.5
PTPRN-209ENST00000451506 PDGFDQ9GZP0 370 aaPredicted RBP24.42■■□□□ 1.5
PTPRN-209ENST00000451506 USP31Q70CQ4 1352 aa24.42■■□□□ 1.5
PTPRN-209ENST00000451506 YY1P25490 414 aa24.41■■□□□ 1.5
PTPRN-209ENST00000451506 TNS2Q63HR2 1409 aa24.4■■□□□ 1.5
PTPRN-209ENST00000451506 CD163L1Q9NR16 1453 aa24.39■■□□□ 1.5
PTPRN-209ENST00000451506 TXNRD1Q16881 649 aa24.39■■□□□ 1.49
PTPRN-209ENST00000451506 USP54Q70EL1 1684 aa24.39■■□□□ 1.49
PTPRN-209ENST00000451506 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.38■■□□□ 1.49
PTPRN-209ENST00000451506 ERBB3P21860 1342 aa24.36■■□□□ 1.49
PTPRN-209ENST00000451506 NME9Q86XW9 330 aa24.36■■□□□ 1.49
PTPRN-209ENST00000451506 ZBTB7AO95365 584 aa24.35■■□□□ 1.49
PTPRN-209ENST00000451506 PTGER2P43116 358 aa24.35■■□□□ 1.49
PTPRN-209ENST00000451506 SLC15A2Q16348 729 aa24.34■■□□□ 1.49
PTPRN-209ENST00000451506 STK32BQ9NY57 414 aa24.34■■□□□ 1.49
PTPRN-209ENST00000451506 NHSQ6T4R5 1651 aa24.34■■□□□ 1.49
PTPRN-209ENST00000451506 DCAF8L1A6NGE4 600 aa24.32■■□□□ 1.48
PTPRN-209ENST00000451506 CARD11Q9BXL7 1154 aa24.32■■□□□ 1.48
PTPRN-209ENST00000451506 NLRP2Q9NX02 1062 aa24.32■■□□□ 1.48
PTPRN-209ENST00000451506 MYOM1P52179 1685 aa24.31■■□□□ 1.48
PTPRN-209ENST00000451506 TMC1Q8TDI8 760 aa24.31■■□□□ 1.48
PTPRN-209ENST00000451506 SLC12A5Q9H2X9 1139 aa24.31■■□□□ 1.48
PTPRN-209ENST00000451506 EDC4Q6P2E9 1401 aaKnown RBP24.3■■□□□ 1.48
PTPRN-209ENST00000451506 LTN1O94822 1766 aa24.3■■□□□ 1.48
PTPRN-209ENST00000451506 IL2RBP14784 551 aa24.3■■□□□ 1.48
PTPRN-209ENST00000451506 ATF5Q9Y2D1 282 aaPredicted RBP24.3■■□□□ 1.48
PTPRN-209ENST00000451506 HDGFL2Q7Z4V5 671 aaPredicted RBP24.29■■□□□ 1.48
PTPRN-209ENST00000451506 ANKRD24Q8TF21 1146 aa24.29■■□□□ 1.48
PTPRN-209ENST00000451506 ACSBG1Q96GR2 724 aa24.29■■□□□ 1.48
PTPRN-209ENST00000451506 PAPPAQ13219 1627 aa24.26■■□□□ 1.47
PTPRN-209ENST00000451506 SGIP1Q9BQI5 828 aa24.26■■□□□ 1.47
PTPRN-209ENST00000451506 MTFR1LQ9H019 292 aa24.26■■□□□ 1.47
PTPRN-209ENST00000451506 A0A1W2PP64 1363 aa24.26■■□□□ 1.47
PTPRN-209ENST00000451506 PUS7Q96PZ0 661 aaKnown RBP24.25■■□□□ 1.47
PTPRN-209ENST00000451506 TERF2IPQ9NYB0 399 aa24.25■■□□□ 1.47
PTPRN-209ENST00000451506 BTAF1O14981 1849 aa24.23■■□□□ 1.47
PTPRN-209ENST00000451506 SYT17Q9BSW7 474 aa24.22■■□□□ 1.47
PTPRN-209ENST00000451506 FHDC1Q9C0D6 1143 aaPredicted RBP24.22■■□□□ 1.47
PTPRN-209ENST00000451506 IP6K1Q92551 441 aa24.21■■□□□ 1.47
PTPRN-209ENST00000451506 LRRC4BQ9NT99 713 aa24.19■■□□□ 1.46
PTPRN-209ENST00000451506 ZNF827Q17R98 1081 aa24.18■■□□□ 1.46
PTPRN-209ENST00000451506 TONSLQ96HA7 1378 aa24.17■■□□□ 1.46
PTPRN-209ENST00000451506 TESK2Q96S53 571 aa24.17■■□□□ 1.46
PTPRN-209ENST00000451506 FAM208AQ9UK61 1670 aaKnown RBP24.16■■□□□ 1.46
PTPRN-209ENST00000451506 DDX54Q8TDD1 881 aaKnown RBP24.15■■□□□ 1.46
PTPRN-209ENST00000451506 ARXQ96QS3 562 aa24.15■■□□□ 1.46
PTPRN-209ENST00000451506 AKT1S1Q96B36 256 aa24.14■■□□□ 1.45
PTPRN-209ENST00000451506 LTV1Q96GA3 475 aaPredicted RBP24.14■■□□□ 1.45
PTPRN-209ENST00000451506 MAP3K19Q56UN5 1328 aa24.13■■□□□ 1.45
PTPRN-209ENST00000451506 MAP3K5Q99683 1374 aa24.13■■□□□ 1.45
PTPRN-209ENST00000451506 ST20-MTHFSA0A0A6YYL1 179 aa24.12■■□□□ 1.45
PTPRN-209ENST00000451506 SLC27A3Q5K4L6 730 aa24.12■■□□□ 1.45
PTPRN-209ENST00000451506 UTRNP46939 3433 aa24.12■■□□□ 1.45
PTPRN-209ENST00000451506 HOXC9P31274 260 aa24.11■■□□□ 1.45
PTPRN-209ENST00000451506 COG3Q96JB2 828 aa24.11■■□□□ 1.45
PTPRN-209ENST00000451506 FBLN1P23142 703 aa24.1■■□□□ 1.45
PTPRN-209ENST00000451506 ZNF784Q8NCA9 323 aaPredicted RBP24.1■■□□□ 1.45
PTPRN-209ENST00000451506 ANKRD36BQ8N2N9 1353 aa24.09■■□□□ 1.45
PTPRN-209ENST00000451506 QSER1Q2KHR3 1735 aa24.08■■□□□ 1.45
PTPRN-209ENST00000451506 PRIM1P49642 420 aaKnown RBP24.08■■□□□ 1.45
PTPRN-209ENST00000451506 SLC16A10Q8TF71 515 aa24.08■■□□□ 1.45
PTPRN-209ENST00000451506 NSD2O96028 1365 aa24.07■■□□□ 1.44
PTPRN-209ENST00000451506 AMPHP49418 695 aa24.07■■□□□ 1.44
PTPRN-209ENST00000451506 PNPLA7Q6ZV29 1317 aa24.07■■□□□ 1.44
PTPRN-209ENST00000451506 SHANK3Q9BYB0 1731 aa24.07■■□□□ 1.44
PTPRN-209ENST00000451506 KAT6BQ8WYB5 2073 aa24.06■■□□□ 1.44
PTPRN-209ENST00000451506 MEGF6O75095 1541 aa24.06■■□□□ 1.44
PTPRN-209ENST00000451506 SLC24A1O60721 1099 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms