RNA–Protein interactions for RNA: ENST00000451036.5

RFTN1-206, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 4

Gene RFTN1, Length 1,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-206ENST00000451036 RGPD5Q99666 1765 aa22.47■■□□□ 1.19
RFTN1-206ENST00000451036 USP54Q70EL1 1684 aa22.46■■□□□ 1.19
RFTN1-206ENST00000451036 TOM1L2Q6ZVM7 507 aa22.46■■□□□ 1.19
RFTN1-206ENST00000451036 RGPD1P0DJD0 1748 aa22.45■■□□□ 1.19
RFTN1-206ENST00000451036 BAG6P46379 1132 aa22.45■■□□□ 1.18
RFTN1-206ENST00000451036 PDE3BQ13370 1112 aa22.45■■□□□ 1.18
RFTN1-206ENST00000451036 WDR17Q8IZU2 1322 aa22.45■■□□□ 1.18
RFTN1-206ENST00000451036 CLSPNQ9HAW4 1339 aa22.45■■□□□ 1.18
RFTN1-206ENST00000451036 FAM196AQ6ZSG2 479 aa22.44■■□□□ 1.18
RFTN1-206ENST00000451036 TNS1Q9HBL0 1735 aaKnown RBP22.44■■□□□ 1.18
RFTN1-206ENST00000451036 PARP4Q9UKK3 1724 aaKnown RBP22.43■■□□□ 1.18
RFTN1-206ENST00000451036 TRIM37O94972 964 aa22.43■■□□□ 1.18
RFTN1-206ENST00000451036 EN1Q05925 392 aaPredicted RBP22.43■■□□□ 1.18
RFTN1-206ENST00000451036 NINLQ9Y2I6 1382 aa22.42■■□□□ 1.18
RFTN1-206ENST00000451036 TIMELESSQ9UNS1 1208 aa22.42■■□□□ 1.18
RFTN1-206ENST00000451036 OVOS2A0A0J9YW53 1432 aa22.41■■□□□ 1.18
RFTN1-206ENST00000451036 OVOS2Q6IE36 1432 aa22.41■■□□□ 1.18
RFTN1-206ENST00000451036 CSB-PGBD3P0DP91 1061 aa22.41■■□□□ 1.18
RFTN1-206ENST00000451036 SLC24A1O60721 1099 aa22.4■■□□□ 1.18
RFTN1-206ENST00000451036 TMF1P82094 1093 aa22.4■■□□□ 1.18
RFTN1-206ENST00000451036 DISP2A7MBM2 1401 aa22.4■■□□□ 1.18
RFTN1-206ENST00000451036 LRRC37A3O60309 1634 aa22.39■■□□□ 1.18
RFTN1-206ENST00000451036 ABCC6O95255 1503 aa22.39■■□□□ 1.17
RFTN1-206ENST00000451036 LTN1O94822 1766 aa22.38■■□□□ 1.17
RFTN1-206ENST00000451036 WNK3Q9BYP7 1800 aa22.38■■□□□ 1.17
RFTN1-206ENST00000451036 CARD10Q9BWT7 1032 aa22.37■■□□□ 1.17
RFTN1-206ENST00000451036 ANKRD36BQ8N2N9 1353 aa22.37■■□□□ 1.17
RFTN1-206ENST00000451036 EZH2Q15910 746 aaKnown RBP22.36■■□□□ 1.17
RFTN1-206ENST00000451036 DDB1Q16531 1140 aa22.36■■□□□ 1.17
RFTN1-206ENST00000451036 PEAK1Q9H792 1746 aa22.34■■□□□ 1.17
RFTN1-206ENST00000451036 ERBB3P21860 1342 aa22.34■■□□□ 1.17
RFTN1-206ENST00000451036 APBA3O96018 575 aa22.34■■□□□ 1.17
RFTN1-206ENST00000451036 CAMKK2Q96RR4 588 aa22.34■■□□□ 1.17
RFTN1-206ENST00000451036 CCER1Q8TC90 406 aaPredicted RBP22.33■■□□□ 1.17
RFTN1-206ENST00000451036 OVOS2A0A0G2JMS6 1433 aa22.32■■□□□ 1.16
RFTN1-206ENST00000451036 PSDA5PKW4 1024 aaPredicted RBP22.32■■□□□ 1.16
RFTN1-206ENST00000451036 FBLN1P23142 703 aa22.32■■□□□ 1.16
RFTN1-206ENST00000451036 COG3Q96JB2 828 aa22.32■■□□□ 1.16
RFTN1-206ENST00000451036 CCDC7Q96M83 1385 aa22.31■■□□□ 1.16
RFTN1-206ENST00000451036 CDCA7Q9BWT1 371 aaPredicted RBP22.31■■□□□ 1.16
RFTN1-206ENST00000451036 MARCH10Q8NA82 808 aaPredicted RBP22.3■■□□□ 1.16
RFTN1-206ENST00000451036 ANKRD24Q8TF21 1146 aa22.3■■□□□ 1.16
RFTN1-206ENST00000451036 NLRP2Q9NX02 1062 aa22.3■■□□□ 1.16
RFTN1-206ENST00000451036 CDCA8Q53HL2 280 aa22.29■■□□□ 1.16
RFTN1-206ENST00000451036 FYB1O15117 783 aa22.28■■□□□ 1.16
RFTN1-206ENST00000451036 IP6K1Q92551 441 aa22.28■■□□□ 1.16
RFTN1-206ENST00000451036 GGNBP2Q9H3C7 697 aa22.28■■□□□ 1.16
RFTN1-206ENST00000451036 MAP3K19Q56UN5 1328 aa22.28■■□□□ 1.16
RFTN1-206ENST00000451036 MYOM1P52179 1685 aa22.27■■□□□ 1.16
RFTN1-206ENST00000451036 SBF2Q86WG5 1849 aa22.27■■□□□ 1.16
RFTN1-206ENST00000451036 PTF1AQ7RTS3 328 aa22.27■■□□□ 1.16
RFTN1-206ENST00000451036 LTV1Q96GA3 475 aaPredicted RBP22.26■■□□□ 1.15
RFTN1-206ENST00000451036 PARD3Q8TEW0 1356 aa22.25■■□□□ 1.15
RFTN1-206ENST00000451036 TNS2Q63HR2 1409 aa22.25■■□□□ 1.15
RFTN1-206ENST00000451036 C11orf95C9JLR9 678 aaPredicted RBP22.25■■□□□ 1.15
RFTN1-206ENST00000451036 EXOC5O00471 708 aa22.25■■□□□ 1.15
RFTN1-206ENST00000451036 R3HDM1Q15032 1099 aaKnown RBP22.25■■□□□ 1.15
RFTN1-206ENST00000451036 RREB1Q92766 1687 aa22.24■■□□□ 1.15
RFTN1-206ENST00000451036 CARD14Q9BXL6 1004 aa22.24■■□□□ 1.15
RFTN1-206ENST00000451036 HOXC9P31274 260 aa22.23■■□□□ 1.15
RFTN1-206ENST00000451036 RRS1Q15050 365 aaKnown RBP22.23■■□□□ 1.15
RFTN1-206ENST00000451036 BCL9O00512 1426 aa22.23■■□□□ 1.15
RFTN1-206ENST00000451036 IL2RBP14784 551 aa22.22■■□□□ 1.15
RFTN1-206ENST00000451036 AMPHP49418 695 aa22.22■■□□□ 1.15
RFTN1-206ENST00000451036 NUP188Q5SRE5 1749 aa22.22■■□□□ 1.15
RFTN1-206ENST00000451036 BCL11BQ9C0K0 894 aaPredicted RBP22.21■■□□□ 1.15
RFTN1-206ENST00000451036 KIF20BQ96Q89 1820 aa22.21■■□□□ 1.15
RFTN1-206ENST00000451036 NSD3Q9BZ95 1437 aa22.21■■□□□ 1.15
RFTN1-206ENST00000451036 HSPA5P11021 654 aaKnown RBP22.19■■□□□ 1.14
RFTN1-206ENST00000451036 POLR3GLQ9BT43 218 aa22.19■■□□□ 1.14
RFTN1-206ENST00000451036 EIF4G2P78344 907 aaKnown RBP eCLIP22.18■■□□□ 1.14
RFTN1-206ENST00000451036 RGPD2P0DJD1 1756 aa22.17■■□□□ 1.14
RFTN1-206ENST00000451036 FAM208AQ9UK61 1670 aaKnown RBP22.17■■□□□ 1.14
RFTN1-206ENST00000451036 LRP5O75197 1615 aa22.17■■□□□ 1.14
RFTN1-206ENST00000451036 RTL1A6NKG5 1358 aa22.16■■□□□ 1.14
RFTN1-206ENST00000451036 PLSCR1O15162 318 aa22.16■■□□□ 1.14
RFTN1-206ENST00000451036 KCNQ2O43526 872 aa22.16■■□□□ 1.14
RFTN1-206ENST00000451036 ACSBG1Q96GR2 724 aa22.15■■□□□ 1.14
RFTN1-206ENST00000451036 RGPD3A6NKT7 1758 aaPredicted RBP22.15■■□□□ 1.14
RFTN1-206ENST00000451036 RGPD4Q7Z3J3 1758 aa22.15■■□□□ 1.14
RFTN1-206ENST00000451036 PROM2Q8N271 834 aa22.13■■□□□ 1.13
RFTN1-206ENST00000451036 HSP90AB2PQ58FF8 381 aa22.12■■□□□ 1.13
RFTN1-206ENST00000451036 NBPF14Q5TI25 921 aa22.12■■□□□ 1.13
RFTN1-206ENST00000451036 NHSQ6T4R5 1651 aa22.11■■□□□ 1.13
RFTN1-206ENST00000451036 NBPF6Q5VWK0 638 aa22.11■■□□□ 1.13
RFTN1-206ENST00000451036 USHBP1Q8N6Y0 703 aa22.11■■□□□ 1.13
RFTN1-206ENST00000451036 NBPF4Q96M43 638 aa22.11■■□□□ 1.13
RFTN1-206ENST00000451036 MEGF6O75095 1541 aa22.11■■□□□ 1.13
RFTN1-206ENST00000451036 DDX54Q8TDD1 881 aaKnown RBP22.1■■□□□ 1.13
RFTN1-206ENST00000451036 ANO8Q9HCE9 1232 aaPredicted RBP22.1■■□□□ 1.13
RFTN1-206ENST00000451036 EMILIN1Q9Y6C2 1016 aa22.1■■□□□ 1.13
RFTN1-206ENST00000451036 FLT4P35916 1363 aa22.1■■□□□ 1.13
RFTN1-206ENST00000451036 CGNL1Q0VF96 1302 aa22.08■■□□□ 1.13
RFTN1-206ENST00000451036 INSRP06213 1382 aa22.08■■□□□ 1.12
RFTN1-206ENST00000451036 KAT6BQ8WYB5 2073 aa22.08■■□□□ 1.12
RFTN1-206ENST00000451036 TXNRD1Q16881 649 aa22.07■■□□□ 1.12
RFTN1-206ENST00000451036 SMG6Q86US8 1419 aaKnown RBP22.06■■□□□ 1.12
RFTN1-206ENST00000451036 SHANK3Q9BYB0 1731 aa22.06■■□□□ 1.12
RFTN1-206ENST00000451036 KIF24Q5T7B8 1368 aa22.06■■□□□ 1.12
RFTN1-206ENST00000451036 PANK3Q9H999 370 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms