RNA–Protein interactions for RNA: ENST00000450931.5

PMS1-217, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-217ENST00000450931 CPSF1Q10570 1443 aaKnown RBP9.6□□□□□ -0.87
PMS1-217ENST00000450931 NHSQ6T4R5 1651 aa9.6□□□□□ -0.87
PMS1-217ENST00000450931 USP54Q70EL1 1684 aa9.6□□□□□ -0.87
PMS1-217ENST00000450931 DDB1Q16531 1140 aa9.6□□□□□ -0.87
PMS1-217ENST00000450931 WDR17Q8IZU2 1322 aa9.59□□□□□ -0.87
PMS1-217ENST00000450931 CENPJQ9HC77 1338 aaPredicted RBP9.59□□□□□ -0.87
PMS1-217ENST00000450931 PAPPAQ13219 1627 aa9.59□□□□□ -0.87
PMS1-217ENST00000450931 SRPK2P78362 688 aaKnown RBP9.58□□□□□ -0.88
PMS1-217ENST00000450931 CCDC7Q96M83 1385 aa9.58□□□□□ -0.88
PMS1-217ENST00000450931 MAP3K5Q99683 1374 aa9.58□□□□□ -0.88
PMS1-217ENST00000450931 TNS2Q63HR2 1409 aa9.57□□□□□ -0.88
PMS1-217ENST00000450931 QSER1Q2KHR3 1735 aa9.57□□□□□ -0.88
PMS1-217ENST00000450931 KCNH5Q8NCM2 988 aa9.57□□□□□ -0.88
PMS1-217ENST00000450931 ANO8Q9HCE9 1232 aaPredicted RBP9.57□□□□□ -0.88
PMS1-217ENST00000450931 NFAT5O94916 1531 aa9.57□□□□□ -0.88
PMS1-217ENST00000450931 TOM1L2Q6ZVM7 507 aa9.56□□□□□ -0.88
PMS1-217ENST00000450931 STK32BQ9NY57 414 aa9.56□□□□□ -0.88
PMS1-217ENST00000450931 COL24A1Q17RW2 1714 aa9.56□□□□□ -0.88
PMS1-217ENST00000450931 PTGER2P43116 358 aa9.56□□□□□ -0.88
PMS1-217ENST00000450931 NLRP6P59044 892 aa9.56□□□□□ -0.88
PMS1-217ENST00000450931 CARD10Q9BWT7 1032 aa9.56□□□□□ -0.88
PMS1-217ENST00000450931 TTC21AQ8NDW8 1320 aa9.56□□□□□ -0.88
PMS1-217ENST00000450931 MON2Q7Z3U7 1717 aa9.56□□□□□ -0.88
PMS1-217ENST00000450931 RGPD5Q99666 1765 aa9.55□□□□□ -0.88
PMS1-217ENST00000450931 CHD4Q14839 1912 aa9.55□□□□□ -0.88
PMS1-217ENST00000450931 MARCH10Q8NA82 808 aaPredicted RBP9.55□□□□□ -0.88
PMS1-217ENST00000450931 MTFR1LQ9H019 292 aa9.55□□□□□ -0.88
PMS1-217ENST00000450931 ARHGEF25Q86VW2 580 aa9.55□□□□□ -0.88
PMS1-217ENST00000450931 ZNF692Q9BU19 519 aaPredicted RBP9.55□□□□□ -0.88
PMS1-217ENST00000450931 SLC15A2Q16348 729 aa9.54□□□□□ -0.88
PMS1-217ENST00000450931 EVC2Q86UK5 1308 aa9.54□□□□□ -0.88
PMS1-217ENST00000450931 TXNRD1Q16881 649 aa9.54□□□□□ -0.88
PMS1-217ENST00000450931 PROM2Q8N271 834 aa9.54□□□□□ -0.88
PMS1-217ENST00000450931 CABP2Q9NPB3 220 aa9.54□□□□□ -0.88
PMS1-217ENST00000450931 FAM208AQ9UK61 1670 aaKnown RBP9.53□□□□□ -0.88
PMS1-217ENST00000450931 SGIP1Q9BQI5 828 aa9.53□□□□□ -0.88
PMS1-217ENST00000450931 CABP1Q9NZU7 370 aa9.53□□□□□ -0.88
PMS1-217ENST00000450931 EXOC5O00471 708 aa9.52□□□□□ -0.88
PMS1-217ENST00000450931 NBPF1Q3BBV0 1214 aa9.52□□□□□ -0.88
PMS1-217ENST00000450931 ZNF784Q8NCA9 323 aaPredicted RBP9.52□□□□□ -0.88
PMS1-217ENST00000450931 TTC21BQ7Z4L5 1316 aa9.52□□□□□ -0.89
PMS1-217ENST00000450931 BTAF1O14981 1849 aa9.52□□□□□ -0.89
PMS1-217ENST00000450931 USP31Q70CQ4 1352 aa9.52□□□□□ -0.89
PMS1-217ENST00000450931 ZBTB7AO95365 584 aa9.51□□□□□ -0.89
PMS1-217ENST00000450931 AXIN2Q9Y2T1 843 aa9.51□□□□□ -0.89
PMS1-217ENST00000450931 ZBTB7CA1YPR0 619 aa9.51□□□□□ -0.89
PMS1-217ENST00000450931 SYT17Q9BSW7 474 aa9.51□□□□□ -0.89
PMS1-217ENST00000450931 LTN1O94822 1766 aa9.51□□□□□ -0.89
PMS1-217ENST00000450931 FHDC1Q9C0D6 1143 aaPredicted RBP9.5□□□□□ -0.89
PMS1-217ENST00000450931 PTF1AQ7RTS3 328 aa9.5□□□□□ -0.89
PMS1-217ENST00000450931 SBNO2Q9Y2G9 1366 aa9.5□□□□□ -0.89
PMS1-217ENST00000450931 CSB-PGBD3P0DP91 1061 aa9.5□□□□□ -0.89
PMS1-217ENST00000450931 PDGFDQ9GZP0 370 aaPredicted RBP9.5□□□□□ -0.89
PMS1-217ENST00000450931 SLC16A10Q8TF71 515 aa9.49□□□□□ -0.89
PMS1-217ENST00000450931 ARXQ96QS3 562 aa9.49□□□□□ -0.89
PMS1-217ENST00000450931 ATF5Q9Y2D1 282 aaPredicted RBP9.49□□□□□ -0.89
PMS1-217ENST00000450931 KTN1Q86UP2 1357 aaKnown RBP9.48□□□□□ -0.89
PMS1-217ENST00000450931 ERBB3P21860 1342 aa9.48□□□□□ -0.89
PMS1-217ENST00000450931 C1QTNF8P60827 252 aa9.48□□□□□ -0.89
PMS1-217ENST00000450931 LY75O60449 1722 aa9.47□□□□□ -0.89
PMS1-217ENST00000450931 IL2RBP14784 551 aa9.46□□□□□ -0.89
PMS1-217ENST00000450931 SLC27A3Q5K4L6 730 aa9.46□□□□□ -0.89
PMS1-217ENST00000450931 TUBGCP6Q96RT7 1819 aa9.46□□□□□ -0.9
PMS1-217ENST00000450931 SENP3-EIF4A1A0A087X0R7 540 aa9.45□□□□□ -0.9
PMS1-217ENST00000450931 SHANK3Q9BYB0 1731 aa9.45□□□□□ -0.9
PMS1-217ENST00000450931 EDC4Q6P2E9 1401 aaKnown RBP9.45□□□□□ -0.9
PMS1-217ENST00000450931 CD163L1Q9NR16 1453 aa9.45□□□□□ -0.9
PMS1-217ENST00000450931 AKT1S1Q96B36 256 aa9.45□□□□□ -0.9
PMS1-217ENST00000450931 ROCK2O75116 1388 aaKnown RBP9.45□□□□□ -0.9
PMS1-217ENST00000450931 DOT1LQ8TEK3 1739 aa9.44□□□□□ -0.9
PMS1-217ENST00000450931 POLD1P28340 1107 aa9.44□□□□□ -0.9
PMS1-217ENST00000450931 HMGB2P26583 209 aaKnown RBP9.43□□□□□ -0.9
PMS1-217ENST00000450931 ZNF827Q17R98 1081 aa9.43□□□□□ -0.9
PMS1-217ENST00000450931 PUS7Q96PZ0 661 aaKnown RBP9.43□□□□□ -0.9
PMS1-217ENST00000450931 ANKRD36BQ8N2N9 1353 aa9.42□□□□□ -0.9
PMS1-217ENST00000450931 GIGYF1O75420 1035 aaPredicted RBP9.42□□□□□ -0.9
PMS1-217ENST00000450931 ANKRD24Q8TF21 1146 aa9.42□□□□□ -0.9
PMS1-217ENST00000450931 L3MBTL2Q969R5 705 aa9.42□□□□□ -0.9
PMS1-217ENST00000450931 ACSBG1Q96GR2 724 aa9.42□□□□□ -0.9
PMS1-217ENST00000450931 NLRP2Q9NX02 1062 aa9.42□□□□□ -0.9
PMS1-217ENST00000450931 GPR162Q16538 588 aa9.42□□□□□ -0.9
PMS1-217ENST00000450931 PNPLA7Q6ZV29 1317 aa9.42□□□□□ -0.9
PMS1-217ENST00000450931 SOX12O15370 315 aa9.41□□□□□ -0.9
PMS1-217ENST00000450931 LRRC4BQ9NT99 713 aa9.41□□□□□ -0.9
PMS1-217ENST00000450931 HDGFL2Q7Z4V5 671 aaPredicted RBP9.41□□□□□ -0.9
PMS1-217ENST00000450931 GRIN3BO60391 1043 aa9.4□□□□□ -0.9
PMS1-217ENST00000450931 NSD2O96028 1365 aa9.4□□□□□ -0.9
PMS1-217ENST00000450931 C5P01031 1676 aa9.4□□□□□ -0.9
PMS1-217ENST00000450931 IP6K1Q92551 441 aa9.4□□□□□ -0.91
PMS1-217ENST00000450931 RTL1A6NKG5 1358 aa9.4□□□□□ -0.91
PMS1-217ENST00000450931 NME9Q86XW9 330 aa9.39□□□□□ -0.91
PMS1-217ENST00000450931 IFFO2Q5TF58 517 aa9.39□□□□□ -0.91
PMS1-217ENST00000450931 TERF2IPQ9NYB0 399 aa9.39□□□□□ -0.91
PMS1-217ENST00000450931 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.38□□□□□ -0.91
PMS1-217ENST00000450931 CGNL1Q0VF96 1302 aa9.38□□□□□ -0.91
PMS1-217ENST00000450931 A0A1W2PP64 1363 aa9.38□□□□□ -0.91
PMS1-217ENST00000450931 TFCP2L1Q9NZI6 479 aa9.37□□□□□ -0.91
PMS1-217ENST00000450931 SLC24A1O60721 1099 aa9.37□□□□□ -0.91
PMS1-217ENST00000450931 TAF1LQ8IZX4 1826 aa9.36□□□□□ -0.91
PMS1-217ENST00000450931 FLAD1Q8NFF5 587 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms