RNA–Protein interactions for RNA: ENST00000450829.5

TM9SF4-205, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 550 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-205ENST00000450829 VIRMAQ69YN4 1812 aaKnown RBP7.69□□□□□ -1.18
TM9SF4-205ENST00000450829 NUDT16Q96DE0 195 aaKnown RBP7.69□□□□□ -1.18
TM9SF4-205ENST00000450829 CABP1Q9NZU7 370 aa7.69□□□□□ -1.18
TM9SF4-205ENST00000450829 USP21Q9UK80 565 aa7.69□□□□□ -1.18
TM9SF4-205ENST00000450829 PHRF1Q9P1Y6 1649 aaKnown RBP7.69□□□□□ -1.18
TM9SF4-205ENST00000450829 SPATA31A3Q5VYP0 1347 aa7.69□□□□□ -1.18
TM9SF4-205ENST00000450829 FYB1O15117 783 aa7.68□□□□□ -1.18
TM9SF4-205ENST00000450829 NEFLP07196 543 aa7.68□□□□□ -1.18
TM9SF4-205ENST00000450829 NCBP3Q53F19 620 aaKnown RBP7.68□□□□□ -1.18
TM9SF4-205ENST00000450829 GGNBP2Q9H3C7 697 aa7.68□□□□□ -1.18
TM9SF4-205ENST00000450829 TRPC5Q9UL62 973 aaPredicted RBP7.68□□□□□ -1.18
TM9SF4-205ENST00000450829 ADAMTS8Q9UP79 889 aa7.68□□□□□ -1.18
TM9SF4-205ENST00000450829 CCDC61Q9Y6R9 512 aa7.68□□□□□ -1.18
TM9SF4-205ENST00000450829 SSH2Q76I76 1423 aa7.68□□□□□ -1.18
TM9SF4-205ENST00000450829 PDE3BQ13370 1112 aa7.67□□□□□ -1.18
TM9SF4-205ENST00000450829 CFAP53Q96M91 514 aa7.67□□□□□ -1.18
TM9SF4-205ENST00000450829 SBNO1A3KN83 1393 aa7.67□□□□□ -1.18
TM9SF4-205ENST00000450829 AATKQ6ZMQ8 1374 aa7.67□□□□□ -1.18
TM9SF4-205ENST00000450829 COL14A1Q05707 1796 aaKnown RBP7.66□□□□□ -1.18
TM9SF4-205ENST00000450829 TNNT2P45379 298 aaPredicted RBP7.66□□□□□ -1.18
TM9SF4-205ENST00000450829 FKBP8Q14318 412 aa7.66□□□□□ -1.18
TM9SF4-205ENST00000450829 ZNF521Q96K83 1311 aa7.66□□□□□ -1.18
TM9SF4-205ENST00000450829 SENP3-EIF4A1A0A087X0R7 540 aa7.65□□□□□ -1.18
TM9SF4-205ENST00000450829 PLEKHG3A1L390 1219 aa7.65□□□□□ -1.18
TM9SF4-205ENST00000450829 RGPD2P0DJD1 1756 aa7.65□□□□□ -1.18
TM9SF4-205ENST00000450829 MTHFSP49914 203 aa7.65□□□□□ -1.18
TM9SF4-205ENST00000450829 RNF123Q5XPI4 1314 aa7.65□□□□□ -1.18
TM9SF4-205ENST00000450829 KRT28Q7Z3Y7 464 aa7.65□□□□□ -1.18
TM9SF4-205ENST00000450829 PHF8Q9UPP1 1060 aa7.65□□□□□ -1.18
TM9SF4-205ENST00000450829 THSD7AQ9UPZ6 1657 aa7.65□□□□□ -1.18
TM9SF4-205ENST00000450829 TNS1Q9HBL0 1735 aaKnown RBP7.64□□□□□ -1.19
TM9SF4-205ENST00000450829 ARHGEF10O15013 1369 aa7.64□□□□□ -1.19
TM9SF4-205ENST00000450829 ACEP12821 1306 aa7.64□□□□□ -1.19
TM9SF4-205ENST00000450829 NME9Q86XW9 330 aa7.64□□□□□ -1.19
TM9SF4-205ENST00000450829 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.64□□□□□ -1.193e-6■■□□□ 14
TM9SF4-205ENST00000450829 CCDC146Q8IYE0 955 aa7.64□□□□□ -1.19
TM9SF4-205ENST00000450829 NGEFQ8N5V2 710 aa7.64□□□□□ -1.19
TM9SF4-205ENST00000450829 ZNF692Q9BU19 519 aaPredicted RBP7.64□□□□□ -1.19
TM9SF4-205ENST00000450829 BCL11AQ9H165 835 aa7.64□□□□□ -1.19
TM9SF4-205ENST00000450829 RGPD5Q99666 1765 aa7.64□□□□□ -1.19
TM9SF4-205ENST00000450829 USP31Q70CQ4 1352 aa7.63□□□□□ -1.19
TM9SF4-205ENST00000450829 TTC21BQ7Z4L5 1316 aa7.63□□□□□ -1.19
TM9SF4-205ENST00000450829 TTC21AQ8NDW8 1320 aa7.63□□□□□ -1.19
TM9SF4-205ENST00000450829 UNC5CLQ8IV45 518 aa7.63□□□□□ -1.19
TM9SF4-205ENST00000450829 CABLES1Q8TDN4 633 aa7.63□□□□□ -1.19
TM9SF4-205ENST00000450829 GJD4Q96KN9 370 aaPredicted RBP7.63□□□□□ -1.19
TM9SF4-205ENST00000450829 CAMTA1Q9Y6Y1 1673 aa7.63□□□□□ -1.19
TM9SF4-205ENST00000450829 NFAT5O94916 1531 aa7.62□□□□□ -1.19
TM9SF4-205ENST00000450829 ERICH6BQ5W0A0 696 aa7.62□□□□□ -1.19
TM9SF4-205ENST00000450829 SALL2Q9Y467 1007 aaPredicted RBP7.62□□□□□ -1.19
TM9SF4-205ENST00000450829 LRRC37A3O60309 1634 aa7.62□□□□□ -1.19
TM9SF4-205ENST00000450829 LMO7Q8WWI1 1683 aa7.61□□□□□ -1.19
TM9SF4-205ENST00000450829 FAM208AQ9UK61 1670 aaKnown RBP7.61□□□□□ -1.19
TM9SF4-205ENST00000450829 APAF1O14727 1248 aa7.61□□□□□ -1.19
TM9SF4-205ENST00000450829 PMFBP1Q8TBY8 1022 aa7.61□□□□□ -1.19
TM9SF4-205ENST00000450829 RUNDC1Q96C34 613 aa7.61□□□□□ -1.19
TM9SF4-205ENST00000450829 CDCA7LQ96GN5 454 aa7.61□□□□□ -1.19
TM9SF4-205ENST00000450829 COG3Q96JB2 828 aa7.61□□□□□ -1.19
TM9SF4-205ENST00000450829 POLKQ9UBT6 870 aa7.61□□□□□ -1.19
TM9SF4-205ENST00000450829 ZRANB1Q9UGI0 708 aa7.61□□□□□ -1.19
TM9SF4-205ENST00000450829 SLIT3O75094 1523 aa7.61□□□□□ -1.19
TM9SF4-205ENST00000450829 LRP5O75197 1615 aa7.6□□□□□ -1.19
TM9SF4-205ENST00000450829 WNK3Q9BYP7 1800 aa7.6□□□□□ -1.19
TM9SF4-205ENST00000450829 EIF5BO60841 1220 aaKnown RBP7.6□□□□□ -1.19
TM9SF4-205ENST00000450829 PLEKHG5O94827 1062 aa7.6□□□□□ -1.19
TM9SF4-205ENST00000450829 PSME1Q06323 249 aa7.6□□□□□ -1.19
TM9SF4-205ENST00000450829 GOLGA2Q08379 1002 aa7.6□□□□□ -1.19
TM9SF4-205ENST00000450829 VPS72Q15906 364 aa7.6□□□□□ -1.19
TM9SF4-205ENST00000450829 DIAPH1O60610 1272 aaKnown RBP7.59□□□□□ -1.19
TM9SF4-205ENST00000450829 U2AF1L5P0DN76 240 aaPredicted RBP7.59□□□□□ -1.19
TM9SF4-205ENST00000450829 IRX6P78412 446 aaPredicted RBP7.59□□□□□ -1.19
TM9SF4-205ENST00000450829 U2AF1Q01081 240 aaKnown RBP eCLIP7.59□□□□□ -1.19
TM9SF4-205ENST00000450829 DUSP27Q5VZP5 1158 aa7.59□□□□□ -1.19
TM9SF4-205ENST00000450829 RCAN3Q9UKA8 241 aa7.59□□□□□ -1.19
TM9SF4-205ENST00000450829 EMILIN1Q9Y6C2 1016 aa7.59□□□□□ -1.19
TM9SF4-205ENST00000450829 FAM83GA6ND36 823 aa7.58□□□□□ -1.2
TM9SF4-205ENST00000450829 HAP1P54257 671 aaPredicted RBP7.58□□□□□ -1.2
TM9SF4-205ENST00000450829 RRP1P56182 461 aaKnown RBP7.58□□□□□ -1.2
TM9SF4-205ENST00000450829 SLFN5Q08AF3 891 aa7.58□□□□□ -1.2
TM9SF4-205ENST00000450829 CCDC27Q2M243 656 aa7.58□□□□□ -1.2
TM9SF4-205ENST00000450829 LMOD2Q6P5Q4 547 aa7.58□□□□□ -1.2
TM9SF4-205ENST00000450829 SEPT12Q8IYM1 358 aa7.58□□□□□ -1.2
TM9SF4-205ENST00000450829 TRMT2AQ8IZ69 625 aaKnown RBP7.58□□□□□ -1.2
TM9SF4-205ENST00000450829 TCP11L2Q8N4U5 519 aa7.58□□□□□ -1.2
TM9SF4-205ENST00000450829 ARXQ96QS3 562 aa7.58□□□□□ -1.2
TM9SF4-205ENST00000450829 PLEKHF1Q96S99 279 aa7.58□□□□□ -1.2
TM9SF4-205ENST00000450829 FLT4P35916 1363 aa7.58□□□□□ -1.2
TM9SF4-205ENST00000450829 KIF24Q5T7B8 1368 aa7.58□□□□□ -1.2
TM9SF4-205ENST00000450829 RREB1Q92766 1687 aa7.57□□□□□ -1.2
TM9SF4-205ENST00000450829 CACNA1FO60840 1977 aa7.57□□□□□ -1.2
TM9SF4-205ENST00000450829 COL18A1P39060 1754 aa7.57□□□□□ -1.2
TM9SF4-205ENST00000450829 E9PSI1 815 aa7.57□□□□□ -1.2
TM9SF4-205ENST00000450829 U2SURPO15042 1029 aaKnown RBP7.57□□□□□ -1.2
TM9SF4-205ENST00000450829 ONECUT3O60422 494 aaPredicted RBP7.57□□□□□ -1.2
TM9SF4-205ENST00000450829 WWC1Q8IX03 1113 aa7.57□□□□□ -1.2
TM9SF4-205ENST00000450829 NGDNQ8NEJ9 315 aaKnown RBP7.57□□□□□ -1.2
TM9SF4-205ENST00000450829 PARP4Q9UKK3 1724 aaKnown RBP7.57□□□□□ -1.2
TM9SF4-205ENST00000450829 RTL1A6NKG5 1358 aa7.57□□□□□ -1.2
TM9SF4-205ENST00000450829 N4BP2Q86UW6 1770 aaPredicted RBP7.56□□□□□ -1.2
TM9SF4-205ENST00000450829 MAPK8IP3Q9UPT6 1336 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms