RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 ZNF530Q6P9A1 599 aaPredicted RBP15.77■□□□□ 0.11
SMARCA4-205ENST00000450717 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.77■□□□□ 0.117e-8■■□□□ 12
SMARCA4-205ENST00000450717 SPG7Q9UQ90 795 aa15.77■□□□□ 0.11
SMARCA4-205ENST00000450717 TTC39AQ5SRH9 613 aa15.77■□□□□ 0.11
SMARCA4-205ENST00000450717 ABCC11Q96J66 1382 aa15.76■□□□□ 0.11
SMARCA4-205ENST00000450717 DHX8Q14562 1220 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-205ENST00000450717 MAP7D2Q96T17 732 aa15.76■□□□□ 0.11
SMARCA4-205ENST00000450717 TRIM5Q9C035 493 aa15.76■□□□□ 0.11
SMARCA4-205ENST00000450717 CCP110O43303 1012 aa15.76■□□□□ 0.11
SMARCA4-205ENST00000450717 SLC3A2P08195 630 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-205ENST00000450717 MEX3CQ5U5Q3 659 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-205ENST00000450717 CCDC43Q96MW1 224 aaKnown RBP15.75■□□□□ 0.11
SMARCA4-205ENST00000450717 FYB1O15117 783 aa15.75■□□□□ 0.11
SMARCA4-205ENST00000450717 R3HCC1Q9Y3T6 440 aaKnown RBP15.75■□□□□ 0.11
SMARCA4-205ENST00000450717 JMYQ8N9B5 988 aa15.74■□□□□ 0.11
SMARCA4-205ENST00000450717 CABP4P57796 275 aa15.74■□□□□ 0.11
SMARCA4-205ENST00000450717 ZSCAN31Q96LW9 406 aaPredicted RBP15.74■□□□□ 0.11
SMARCA4-205ENST00000450717 FIBPO43427 364 aa15.74■□□□□ 0.11
SMARCA4-205ENST00000450717 PDIA4P13667 645 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-205ENST00000450717 CDR1P51861 262 aa15.73■□□□□ 0.11
SMARCA4-205ENST00000450717 ALDH1L2Q3SY69 923 aa15.73■□□□□ 0.11
SMARCA4-205ENST00000450717 STK38Q15208 465 aa15.73■□□□□ 0.11
SMARCA4-205ENST00000450717 GNL3LQ9NVN8 582 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-205ENST00000450717 NKTRP30414 1462 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-205ENST00000450717 AK7Q96M32 723 aa15.73■□□□□ 0.11
SMARCA4-205ENST00000450717 CNNM1Q9NRU3 951 aa15.73■□□□□ 0.11
SMARCA4-205ENST00000450717 POGZQ7Z3K3 1410 aa15.73■□□□□ 0.11
SMARCA4-205ENST00000450717 CCDC192P0DO97 292 aa15.72■□□□□ 0.11
SMARCA4-205ENST00000450717 PIP4K2AP48426 406 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-205ENST00000450717 PDILTQ8N807 584 aa15.72■□□□□ 0.11
SMARCA4-205ENST00000450717 NCOA1Q15788 1441 aa15.72■□□□□ 0.11
SMARCA4-205ENST00000450717 ZSCAN25Q6NSZ9 544 aa15.72■□□□□ 0.11
SMARCA4-205ENST00000450717 RUFY1Q96T51 708 aa15.72■□□□□ 0.11
SMARCA4-205ENST00000450717 RBM42Q9BTD8 480 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-205ENST00000450717 FILIP1LQ4L180 1135 aa15.72■□□□□ 0.11
SMARCA4-205ENST00000450717 FAM135AQ9P2D6 1515 aa15.71■□□□□ 0.11
SMARCA4-205ENST00000450717 HMGN5P82970 282 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-205ENST00000450717 TMEM57Q8N5G2 664 aa15.71■□□□□ 0.11
SMARCA4-205ENST00000450717 CCDC61Q9Y6R9 512 aa15.71■□□□□ 0.11
SMARCA4-205ENST00000450717 TXLNAP40222 546 aa15.71■□□□□ 0.11
SMARCA4-205ENST00000450717 KRT85P78386 507 aa15.71■□□□□ 0.11
SMARCA4-205ENST00000450717 RRS1Q15050 365 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-205ENST00000450717 NUDT16Q96DE0 195 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-205ENST00000450717 SMC2O95347 1197 aa15.71■□□□□ 0.1
SMARCA4-205ENST00000450717 RAPGEF3O95398 923 aa15.71■□□□□ 0.1
SMARCA4-205ENST00000450717 NAP1L1P55209 391 aaKnown RBP15.71■□□□□ 0.1
SMARCA4-205ENST00000450717 SRGAP3O43295 1099 aa15.7■□□□□ 0.1
SMARCA4-205ENST00000450717 SMARCE1Q969G3 411 aa15.7■□□□□ 0.1
SMARCA4-205ENST00000450717 RPRD2Q5VT52 1461 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-205ENST00000450717 NACAP1Q9BZK3 213 aa15.7■□□□□ 0.1
SMARCA4-205ENST00000450717 GNAT3A8MTJ3 354 aa15.69■□□□□ 0.1
SMARCA4-205ENST00000450717 KRT32Q14532 448 aa15.69■□□□□ 0.1
SMARCA4-205ENST00000450717 HSP90B2PQ58FF3 399 aa15.69■□□□□ 0.1
SMARCA4-205ENST00000450717 AACSQ86V21 672 aa15.69■□□□□ 0.1
SMARCA4-205ENST00000450717 BTBD11A6QL63 1104 aa15.69■□□□□ 0.1
SMARCA4-205ENST00000450717 EPS15P42566 896 aa15.69■□□□□ 0.1
SMARCA4-205ENST00000450717 GRPEL1Q9HAV7 217 aa15.69■□□□□ 0.1
SMARCA4-205ENST00000450717 RARSP54136 660 aaKnown RBP15.69■□□□□ 0.1
SMARCA4-205ENST00000450717 BLOC1S2Q6QNY1 142 aa15.69■□□□□ 0.1
SMARCA4-205ENST00000450717 ANKLE2Q86XL3 938 aa15.69■□□□□ 0.1
SMARCA4-205ENST00000450717 ERCC4Q92889 916 aaPredicted RBP15.69■□□□□ 0.1
SMARCA4-205ENST00000450717 PDRG1Q9NUG6 133 aa15.69■□□□□ 0.1
SMARCA4-205ENST00000450717 GRIN2AQ12879 1464 aa15.68■□□□□ 0.1
SMARCA4-205ENST00000450717 MCM4P33991 863 aa15.68■□□□□ 0.1
SMARCA4-205ENST00000450717 TRIM22Q8IYM9 498 aa15.68■□□□□ 0.1
SMARCA4-205ENST00000450717 SIL1Q9H173 461 aa15.68■□□□□ 0.1
SMARCA4-205ENST00000450717 TNMDQ9H2S6 317 aa15.68■□□□□ 0.1
SMARCA4-205ENST00000450717 LARP1BQ659C4 914 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-205ENST00000450717 DACH1Q9UI36 760 aa15.68■□□□□ 0.1
SMARCA4-205ENST00000450717 PLB1Q6P1J6 1458 aa15.68■□□□□ 0.1
SMARCA4-205ENST00000450717 CTNNA3Q9UI47 895 aa15.68■□□□□ 0.1
SMARCA4-205ENST00000450717 NSD2O96028 1365 aa15.67■□□□□ 0.1
SMARCA4-205ENST00000450717 C11orf95C9JLR9 678 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-205ENST00000450717 RAB11FIP3O75154 756 aa15.67■□□□□ 0.1
SMARCA4-205ENST00000450717 BIVM-ERCC5R4GMW8 1640 aa15.67■□□□□ 0.1
SMARCA4-205ENST00000450717 OFD1O75665 1012 aa15.67■□□□□ 0.1
SMARCA4-205ENST00000450717 CCDC57Q2TAC2 916 aa15.67■□□□□ 0.1
SMARCA4-205ENST00000450717 MAGEC2Q9UBF1 373 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-205ENST00000450717 SCAF11Q99590 1463 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-205ENST00000450717 KCNH5Q8NCM2 988 aa15.67■□□□□ 0.1
SMARCA4-205ENST00000450717 PPP6R1Q9UPN7 881 aa15.67■□□□□ 0.1
SMARCA4-205ENST00000450717 RRP12Q5JTH9 1297 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-205ENST00000450717 BRPF3Q9ULD4 1205 aa15.66■□□□□ 0.1
SMARCA4-205ENST00000450717 CDKL5O76039 1030 aa15.66■□□□□ 0.1
SMARCA4-205ENST00000450717 MAP4K4O95819 1239 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-205ENST00000450717 CT47A1Q5JQC4 288 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-205ENST00000450717 TOM1L2Q6ZVM7 507 aa15.66■□□□□ 0.1
SMARCA4-205ENST00000450717 STRN4Q9NRL3 753 aa15.66■□□□□ 0.1
SMARCA4-205ENST00000450717 MYL6BP14649 208 aa15.65■□□□□ 0.1
SMARCA4-205ENST00000450717 STK3Q13188 491 aa15.65■□□□□ 0.1
SMARCA4-205ENST00000450717 CDK5RAP3Q96JB5 506 aa15.65■□□□□ 0.1
SMARCA4-205ENST00000450717 ANO8Q9HCE9 1232 aaPredicted RBP15.65■□□□□ 0.1
SMARCA4-205ENST00000450717 CFAP45Q9UL16 551 aa15.65■□□□□ 0.1
SMARCA4-205ENST00000450717 ADGRL1O94910 1474 aa15.65■□□□□ 0.1
SMARCA4-205ENST00000450717 CAGE1Q8TC20 777 aa15.65■□□□□ 0.1
SMARCA4-205ENST00000450717 LRPPRCP42704 1394 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-205ENST00000450717 CCDC69A6NI79 296 aa15.65■□□□□ 0.1
SMARCA4-205ENST00000450717 JAKMIP1Q96N16 626 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-205ENST00000450717 FAM177BA6PVY3 158 aa15.64■□□□□ 0.09
SMARCA4-205ENST00000450717 ATP2B1P20020 1258 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms