RNA–Protein interactions for RNA: ENST00000450102.6

SCN5A-208, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 6,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-208ENST00000450102 GAS2L2Q8NHY3 880 aa12.81□□□□□ -0.36
SCN5A-208ENST00000450102 DDX54Q8TDD1 881 aaKnown RBP12.81□□□□□ -0.36
SCN5A-208ENST00000450102 STAMBPO95630 424 aa12.8□□□□□ -0.36
SCN5A-208ENST00000450102 NF2P35240 595 aa12.8□□□□□ -0.36
SCN5A-208ENST00000450102 GRIPAP1Q4V328 841 aa12.8□□□□□ -0.36
SCN5A-208ENST00000450102 IQCEQ6IPM2 695 aa12.8□□□□□ -0.36
SCN5A-208ENST00000450102 MIA2Q96PC5 1412 aa12.8□□□□□ -0.36
SCN5A-208ENST00000450102 EIF3JO75822 258 aaKnown RBP12.8□□□□□ -0.36
SCN5A-208ENST00000450102 PANK1Q8TE04 598 aa12.8□□□□□ -0.36
SCN5A-208ENST00000450102 PIBF1Q8WXW3 757 aa12.8□□□□□ -0.36
SCN5A-208ENST00000450102 SIL1Q9H173 461 aa12.8□□□□□ -0.36
SCN5A-208ENST00000450102 TMOD2Q9NZR1 351 aa12.8□□□□□ -0.36
SCN5A-208ENST00000450102 PDS5BQ9NTI5 1447 aa12.8□□□□□ -0.36
SCN5A-208ENST00000450102 DYDC1Q8WWB3 177 aa12.8□□□□□ -0.36
SCN5A-208ENST00000450102 ZSCAN25Q6NSZ9 544 aa12.8□□□□□ -0.36
SCN5A-208ENST00000450102 TNMDQ9H2S6 317 aa12.79□□□□□ -0.36
SCN5A-208ENST00000450102 CBFA2T2O43439 604 aa12.79□□□□□ -0.36
SCN5A-208ENST00000450102 MCM2P49736 904 aa12.79□□□□□ -0.36
SCN5A-208ENST00000450102 DHX8Q14562 1220 aaKnown RBP12.79□□□□□ -0.36
SCN5A-208ENST00000450102 PPP4R3AQ6IN85 833 aa12.79□□□□□ -0.36
SCN5A-208ENST00000450102 DHX57Q6P158 1386 aaKnown RBP12.79□□□□□ -0.36
SCN5A-208ENST00000450102 GOLGA6L10A0A0M3HER8 536 aa12.79□□□□□ -0.36
SCN5A-208ENST00000450102 CYP46A1Q9Y6A2 500 aa12.79□□□□□ -0.36
SCN5A-208ENST00000450102 TDO2P48775 406 aa12.79□□□□□ -0.36
SCN5A-208ENST00000450102 NFKBIBQ15653 356 aa12.79□□□□□ -0.36
SCN5A-208ENST00000450102 SMG6Q86US8 1419 aaKnown RBP12.79□□□□□ -0.36
SCN5A-208ENST00000450102 TNIP1Q15025 636 aa12.79□□□□□ -0.36
SCN5A-208ENST00000450102 UBAC1Q9BSL1 405 aa12.79□□□□□ -0.36
SCN5A-208ENST00000450102 WDR70Q9NW82 654 aa12.79□□□□□ -0.36
SCN5A-208ENST00000450102 KIAA1328Q86T90 577 aa12.78□□□□□ -0.36
SCN5A-208ENST00000450102 COMMD10Q9Y6G5 202 aa12.78□□□□□ -0.36
SCN5A-208ENST00000450102 USP47Q96K76 1375 aa12.78□□□□□ -0.36
SCN5A-208ENST00000450102 EPB41L2O43491 1005 aaKnown RBP12.78□□□□□ -0.36
SCN5A-208ENST00000450102 FKBP4Q02790 459 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCN5A-208ENST00000450102 TOM1L2Q6ZVM7 507 aa12.78□□□□□ -0.36
SCN5A-208ENST00000450102 CABP2Q9NPB3 220 aa12.78□□□□□ -0.36
SCN5A-208ENST00000450102 EIF5P55010 431 aaKnown RBP12.78□□□□□ -0.36
SCN5A-208ENST00000450102 ANKRD1Q15327 319 aa12.78□□□□□ -0.36
SCN5A-208ENST00000450102 LRRCC1Q9C099 1032 aa12.78□□□□□ -0.36
SCN5A-208ENST00000450102 RAI14Q9P0K7 980 aa12.78□□□□□ -0.36
SCN5A-208ENST00000450102 JPH4Q96JJ6 628 aa12.78□□□□□ -0.36
SCN5A-208ENST00000450102 ZBED9Q6R2W3 1325 aa12.78□□□□□ -0.36
SCN5A-208ENST00000450102 CCDC192P0DO97 292 aa12.77□□□□□ -0.36
SCN5A-208ENST00000450102 PROSER2Q86WR7 435 aaPredicted RBP12.77□□□□□ -0.36
SCN5A-208ENST00000450102 CEP57L1Q8IYX8 460 aa12.77□□□□□ -0.36
SCN5A-208ENST00000450102 SLC26A8Q96RN1 970 aa12.77□□□□□ -0.36
SCN5A-208ENST00000450102 PSMD1Q99460 953 aa12.77□□□□□ -0.36
SCN5A-208ENST00000450102 PPP1R12BO60237 982 aaPredicted RBP12.77□□□□□ -0.37
SCN5A-208ENST00000450102 GNAI2P04899 355 aa12.77□□□□□ -0.37
SCN5A-208ENST00000450102 MAP2K1Q02750 393 aaPredicted RBP12.77□□□□□ -0.37
SCN5A-208ENST00000450102 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.77□□□□□ -0.37
SCN5A-208ENST00000450102 AEBP1Q8IUX7 1158 aa12.77□□□□□ -0.37
SCN5A-208ENST00000450102 PRKRIP1Q9H875 184 aaPredicted RBP12.77□□□□□ -0.37
SCN5A-208ENST00000450102 BICDL1Q6ZP65 573 aa12.76□□□□□ -0.37
SCN5A-208ENST00000450102 CCDC113Q9H0I3 377 aa12.76□□□□□ -0.37
SCN5A-208ENST00000450102 TRAK2O60296 914 aa12.76□□□□□ -0.37
SCN5A-208ENST00000450102 CDKL5O76039 1030 aa12.76□□□□□ -0.37
SCN5A-208ENST00000450102 MAP4K4O95819 1239 aaPredicted RBP12.76□□□□□ -0.37
SCN5A-208ENST00000450102 WDR78Q5VTH9 848 aa12.76□□□□□ -0.37
SCN5A-208ENST00000450102 MYL6BP14649 208 aa12.76□□□□□ -0.37
SCN5A-208ENST00000450102 TTLL12Q14166 644 aaPredicted RBP12.76□□□□□ -0.37
SCN5A-208ENST00000450102 CEP63Q96MT8 703 aa12.76□□□□□ -0.37
SCN5A-208ENST00000450102 DRC1Q96MC2 740 aa12.75□□□□□ -0.37
SCN5A-208ENST00000450102 FAM69CQ0P6D2 419 aa12.75□□□□□ -0.37
SCN5A-208ENST00000450102 CCDC102AQ96A19 550 aa12.75□□□□□ -0.37
SCN5A-208ENST00000450102 ZNF397Q8NF99 534 aaPredicted RBP12.75□□□□□ -0.37
SCN5A-208ENST00000450102 LRP2BPQ9P2M1 347 aa12.75□□□□□ -0.37
SCN5A-208ENST00000450102 SPINK5Q9NQ38 1064 aaPredicted RBP12.74□□□□□ -0.37
SCN5A-208ENST00000450102 C1orf115Q9H7X2 142 aa12.74□□□□□ -0.37
SCN5A-208ENST00000450102 AAMPQ13685 434 aa12.74□□□□□ -0.37
SCN5A-208ENST00000450102 PPM1EQ8WY54 764 aa12.74□□□□□ -0.37
SCN5A-208ENST00000450102 HDGFL1Q5TGJ6 251 aa12.74□□□□□ -0.37
SCN5A-208ENST00000450102 RBM10P98175 930 aaKnown RBP12.73□□□□□ -0.37
SCN5A-208ENST00000450102 PIP4K2BP78356 416 aa12.73□□□□□ -0.37
SCN5A-208ENST00000450102 KRT85P78386 507 aa12.73□□□□□ -0.37
SCN5A-208ENST00000450102 CRACR2BQ8N4Y2 399 aaPredicted RBP12.73□□□□□ -0.37
SCN5A-208ENST00000450102 USP8P40818 1118 aa12.73□□□□□ -0.37
SCN5A-208ENST00000450102 LARP1BQ659C4 914 aaKnown RBP12.73□□□□□ -0.37
SCN5A-208ENST00000450102 GSTTP1A0A1W2PQM5 241 aa12.73□□□□□ -0.37
SCN5A-208ENST00000450102 PABPN1LA6NDY0 278 aaKnown RBP12.73□□□□□ -0.37
SCN5A-208ENST00000450102 CCDC150Q8NCX0 1101 aa12.73□□□□□ -0.37
SCN5A-208ENST00000450102 CCDC148Q8NFR7 591 aa12.73□□□□□ -0.37
SCN5A-208ENST00000450102 CTNNBL1Q8WYA6 563 aaPredicted RBP12.73□□□□□ -0.37
SCN5A-208ENST00000450102 CFAP45Q9UL16 551 aa12.73□□□□□ -0.37
SCN5A-208ENST00000450102 SPG7Q9UQ90 795 aa12.73□□□□□ -0.37
SCN5A-208ENST00000450102 HOMER2Q9NSB8 354 aa12.72□□□□□ -0.37
SCN5A-208ENST00000450102 SEC63Q9UGP8 760 aaKnown RBP12.72□□□□□ -0.37
SCN5A-208ENST00000450102 FHOD3Q2V2M9 1422 aa12.72□□□□□ -0.37
SCN5A-208ENST00000450102 MPNDQ8N594 471 aa12.72□□□□□ -0.37
SCN5A-208ENST00000450102 UBA5Q9GZZ9 404 aa12.72□□□□□ -0.37
SCN5A-208ENST00000450102 IGHMBP2P38935 993 aaKnown RBP12.72□□□□□ -0.37
SCN5A-208ENST00000450102 HOOK3Q86VS8 718 aa12.72□□□□□ -0.37
SCN5A-208ENST00000450102 GIMAP7Q8NHV1 300 aa12.72□□□□□ -0.37
SCN5A-208ENST00000450102 WASF1Q92558 559 aa12.72□□□□□ -0.37
SCN5A-208ENST00000450102 TWISTNBQ3B726 338 aaPredicted RBP12.71□□□□□ -0.37
SCN5A-208ENST00000450102 CTNNA3Q9UI47 895 aa12.71□□□□□ -0.37
SCN5A-208ENST00000450102 SLC4A2P04920 1241 aa12.71□□□□□ -0.37
SCN5A-208ENST00000450102 UBE4AQ14139 1066 aa12.71□□□□□ -0.37
SCN5A-208ENST00000450102 GOPCQ9HD26 462 aa12.71□□□□□ -0.37
SCN5A-208ENST00000450102 ARHGAP29Q52LW3 1261 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms