RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 AXIN2Q9Y2T1 843 aa30.81■■■□□ 2.52
CPSF7-208ENST00000450000 DDB1Q16531 1140 aa30.79■■■□□ 2.52
CPSF7-208ENST00000450000 CDCA7Q9BWT1 371 aaPredicted RBP30.78■■■□□ 2.52
CPSF7-208ENST00000450000 RGPD1P0DJD0 1748 aa30.78■■■□□ 2.52
CPSF7-208ENST00000450000 TMF1P82094 1093 aa30.77■■■□□ 2.52
CPSF7-208ENST00000450000 USP31Q70CQ4 1352 aa30.77■■■□□ 2.52
CPSF7-208ENST00000450000 NINLQ9Y2I6 1382 aa30.77■■■□□ 2.52
CPSF7-208ENST00000450000 EDC4Q6P2E9 1401 aaKnown RBP30.76■■■□□ 2.51
CPSF7-208ENST00000450000 TESK2Q96S53 571 aa30.76■■■□□ 2.51
CPSF7-208ENST00000450000 EZH2Q15910 746 aaKnown RBP30.74■■■□□ 2.51
CPSF7-208ENST00000450000 CARD10Q9BWT7 1032 aa30.74■■■□□ 2.51
CPSF7-208ENST00000450000 A0A1W2PP64 1363 aa30.74■■■□□ 2.51
CPSF7-208ENST00000450000 PSDA5PKW4 1024 aaPredicted RBP30.73■■■□□ 2.51
CPSF7-208ENST00000450000 TIMELESSQ9UNS1 1208 aa30.73■■■□□ 2.51
CPSF7-208ENST00000450000 CD163L1Q9NR16 1453 aa30.73■■■□□ 2.51
CPSF7-208ENST00000450000 MON2Q7Z3U7 1717 aa30.73■■■□□ 2.51
CPSF7-208ENST00000450000 USP47Q96K76 1375 aa30.72■■■□□ 2.51
CPSF7-208ENST00000450000 CDCA8Q53HL2 280 aa30.71■■■□□ 2.51
CPSF7-208ENST00000450000 DISP2A7MBM2 1401 aa30.71■■■□□ 2.51
CPSF7-208ENST00000450000 CLSPNQ9HAW4 1339 aa30.7■■■□□ 2.5
CPSF7-208ENST00000450000 OVOS2A0A0G2JMS6 1433 aa30.68■■■□□ 2.5
CPSF7-208ENST00000450000 OVOS2A0A0J9YW53 1432 aa30.68■■■□□ 2.5
CPSF7-208ENST00000450000 OVOS2Q6IE36 1432 aa30.68■■■□□ 2.5
CPSF7-208ENST00000450000 COG3Q96JB2 828 aa30.68■■■□□ 2.5
CPSF7-208ENST00000450000 NLRP2Q9NX02 1062 aa30.68■■■□□ 2.5
CPSF7-208ENST00000450000 NFAT5O94916 1531 aa30.68■■■□□ 2.5
CPSF7-208ENST00000450000 PARD3Q8TEW0 1356 aa30.67■■■□□ 2.5
CPSF7-208ENST00000450000 CCDC7Q96M83 1385 aa30.67■■■□□ 2.5
CPSF7-208ENST00000450000 EXOC5O00471 708 aa30.67■■■□□ 2.5
CPSF7-208ENST00000450000 CAMKK2Q96RR4 588 aa30.67■■■□□ 2.5
CPSF7-208ENST00000450000 COL18A1P39060 1754 aa30.66■■■□□ 2.5
CPSF7-208ENST00000450000 R3HDM1Q15032 1099 aaKnown RBP30.65■■■□□ 2.5
CPSF7-208ENST00000450000 PARP4Q9UKK3 1724 aaKnown RBP30.64■■■□□ 2.5
CPSF7-208ENST00000450000 NBPF14Q5TI25 921 aa30.64■■■□□ 2.5
CPSF7-208ENST00000450000 ABCC6O95255 1503 aa30.63■■■□□ 2.49
CPSF7-208ENST00000450000 ANKRD24Q8TF21 1146 aa30.62■■■□□ 2.49
CPSF7-208ENST00000450000 ERBB3P21860 1342 aa30.61■■■□□ 2.49
CPSF7-208ENST00000450000 TNS1Q9HBL0 1735 aaKnown RBP30.61■■■□□ 2.49
CPSF7-208ENST00000450000 ANKRD36BQ8N2N9 1353 aa30.6■■■□□ 2.49
CPSF7-208ENST00000450000 MARCH10Q8NA82 808 aaPredicted RBP30.58■■■□□ 2.49
CPSF7-208ENST00000450000 CCER1Q8TC90 406 aaPredicted RBP30.58■■■□□ 2.49
CPSF7-208ENST00000450000 AMPHP49418 695 aa30.57■■■□□ 2.48
CPSF7-208ENST00000450000 LTV1Q96GA3 475 aaPredicted RBP30.57■■■□□ 2.48
CPSF7-208ENST00000450000 IL2RBP14784 551 aa30.56■■■□□ 2.48
CPSF7-208ENST00000450000 IP6K1Q92551 441 aa30.56■■■□□ 2.48
CPSF7-208ENST00000450000 BCL11BQ9C0K0 894 aaPredicted RBP30.56■■■□□ 2.48
CPSF7-208ENST00000450000 LRRC37A3O60309 1634 aa30.55■■■□□ 2.48
CPSF7-208ENST00000450000 RGPD5Q99666 1765 aa30.54■■■□□ 2.48
CPSF7-208ENST00000450000 USP54Q70EL1 1684 aa30.54■■■□□ 2.48
CPSF7-208ENST00000450000 PLSCR1O15162 318 aa30.5■■■□□ 2.47
CPSF7-208ENST00000450000 GGNBP2Q9H3C7 697 aa30.5■■■□□ 2.47
CPSF7-208ENST00000450000 POLR3GLQ9BT43 218 aa30.49■■■□□ 2.47
CPSF7-208ENST00000450000 MAP3K19Q56UN5 1328 aa30.48■■■□□ 2.47
CPSF7-208ENST00000450000 LTN1O94822 1766 aa30.48■■■□□ 2.47
CPSF7-208ENST00000450000 TNS2Q63HR2 1409 aa30.47■■■□□ 2.47
CPSF7-208ENST00000450000 FYB1O15117 783 aa30.47■■■□□ 2.47
CPSF7-208ENST00000450000 HOXC9P31274 260 aa30.46■■■□□ 2.47
CPSF7-208ENST00000450000 BCL9O00512 1426 aa30.46■■■□□ 2.47
CPSF7-208ENST00000450000 WNK3Q9BYP7 1800 aa30.45■■■□□ 2.46
CPSF7-208ENST00000450000 FBLN1P23142 703 aa30.44■■■□□ 2.46
CPSF7-208ENST00000450000 PEAK1Q9H792 1746 aa30.44■■■□□ 2.46
CPSF7-208ENST00000450000 RRS1Q15050 365 aaKnown RBP30.43■■■□□ 2.46
CPSF7-208ENST00000450000 PTF1AQ7RTS3 328 aa30.42■■■□□ 2.46
CPSF7-208ENST00000450000 ACSBG1Q96GR2 724 aa30.42■■■□□ 2.46
CPSF7-208ENST00000450000 SRCAPQ6ZRS2 3230 aa30.41■■■□□ 2.46
CPSF7-208ENST00000450000 EIF4G2P78344 907 aaKnown RBP eCLIP30.4■■■□□ 2.46
CPSF7-208ENST00000450000 DDX54Q8TDD1 881 aaKnown RBP30.4■■■□□ 2.46
CPSF7-208ENST00000450000 LRP5O75197 1615 aa30.4■■■□□ 2.46
CPSF7-208ENST00000450000 SMG6Q86US8 1419 aaKnown RBP30.39■■■□□ 2.45
CPSF7-208ENST00000450000 RTL1A6NKG5 1358 aa30.38■■■□□ 2.45
CPSF7-208ENST00000450000 KCNQ2O43526 872 aa30.37■■■□□ 2.45
CPSF7-208ENST00000450000 RREB1Q92766 1687 aa30.36■■■□□ 2.45
CPSF7-208ENST00000450000 TXNRD1Q16881 649 aa30.35■■■□□ 2.45
CPSF7-208ENST00000450000 NSD3Q9BZ95 1437 aa30.35■■■□□ 2.45
CPSF7-208ENST00000450000 NUP188Q5SRE5 1749 aa30.34■■■□□ 2.45
CPSF7-208ENST00000450000 CARD14Q9BXL6 1004 aa30.33■■■□□ 2.45
CPSF7-208ENST00000450000 STK32BQ9NY57 414 aa30.33■■■□□ 2.45
CPSF7-208ENST00000450000 SBF2Q86WG5 1849 aa30.33■■■□□ 2.45
CPSF7-208ENST00000450000 PPP1R1BQ9UD71 204 aaPredicted RBP30.32■■■□□ 2.44
CPSF7-208ENST00000450000 CGNL1Q0VF96 1302 aa30.31■■■□□ 2.44
CPSF7-208ENST00000450000 RAPGEF4Q8WZA2 1011 aa30.31■■■□□ 2.44
CPSF7-208ENST00000450000 SPON1Q9HCB6 807 aa30.31■■■□□ 2.44
CPSF7-208ENST00000450000 PPM1GO15355 546 aaPredicted RBP30.3■■■□□ 2.44
CPSF7-208ENST00000450000 ZCRB1Q8TBF4 217 aaKnown RBP30.3■■■□□ 2.44
CPSF7-208ENST00000450000 FAM208AQ9UK61 1670 aaKnown RBP30.3■■■□□ 2.44
CPSF7-208ENST00000450000 HSPA5P11021 654 aaKnown RBP30.29■■■□□ 2.44
CPSF7-208ENST00000450000 PROM2Q8N271 834 aa30.29■■■□□ 2.44
CPSF7-208ENST00000450000 SYTL4Q96C24 671 aaPredicted RBP30.29■■■□□ 2.44
CPSF7-208ENST00000450000 FLT4P35916 1363 aa30.28■■■□□ 2.44
CPSF7-208ENST00000450000 RGPD3A6NKT7 1758 aaPredicted RBP30.28■■■□□ 2.44
CPSF7-208ENST00000450000 RGPD4Q7Z3J3 1758 aa30.28■■■□□ 2.44
CPSF7-208ENST00000450000 HSP90AB2PQ58FF8 381 aa30.27■■■□□ 2.44
CPSF7-208ENST00000450000 NBPF6Q5VWK0 638 aa30.27■■■□□ 2.44
CPSF7-208ENST00000450000 USHBP1Q8N6Y0 703 aa30.27■■■□□ 2.44
CPSF7-208ENST00000450000 NBPF4Q96M43 638 aa30.27■■■□□ 2.44
CPSF7-208ENST00000450000 KIF24Q5T7B8 1368 aa30.27■■■□□ 2.44
CPSF7-208ENST00000450000 TATP17735 454 aaPredicted RBP30.26■■■□□ 2.43
CPSF7-208ENST00000450000 ANO8Q9HCE9 1232 aaPredicted RBP30.26■■■□□ 2.43
CPSF7-208ENST00000450000 INSRP06213 1382 aa30.26■■■□□ 2.43
CPSF7-208ENST00000450000 KIF20BQ96Q89 1820 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms