RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 NME9Q86XW9 330 aa24.37■■□□□ 1.49
CLTCL1-203ENST00000449918 WDR17Q8IZU2 1322 aa24.36■■□□□ 1.49
CLTCL1-203ENST00000449918 EDC4Q6P2E9 1401 aaKnown RBP24.36■■□□□ 1.49
CLTCL1-203ENST00000449918 MON2Q7Z3U7 1717 aa24.35■■□□□ 1.49
CLTCL1-203ENST00000449918 USP47Q96K76 1375 aa24.35■■□□□ 1.49
CLTCL1-203ENST00000449918 CSB-PGBD3P0DP91 1061 aa24.35■■□□□ 1.49
CLTCL1-203ENST00000449918 TMF1P82094 1093 aa24.35■■□□□ 1.49
CLTCL1-203ENST00000449918 A0A1W2PP64 1363 aa24.34■■□□□ 1.49
CLTCL1-203ENST00000449918 C11orf95C9JLR9 678 aaPredicted RBP24.33■■□□□ 1.49
CLTCL1-203ENST00000449918 TRIM37O94972 964 aa24.33■■□□□ 1.49
CLTCL1-203ENST00000449918 EN1Q05925 392 aaPredicted RBP24.32■■□□□ 1.48
CLTCL1-203ENST00000449918 CDCA7Q9BWT1 371 aaPredicted RBP24.32■■□□□ 1.48
CLTCL1-203ENST00000449918 NFAT5O94916 1531 aa24.31■■□□□ 1.48
CLTCL1-203ENST00000449918 CARD10Q9BWT7 1032 aa24.31■■□□□ 1.48
CLTCL1-203ENST00000449918 COL18A1P39060 1754 aa24.31■■□□□ 1.48
CLTCL1-203ENST00000449918 CDCA8Q53HL2 280 aa24.3■■□□□ 1.48
CLTCL1-203ENST00000449918 RGPD1P0DJD0 1748 aa24.3■■□□□ 1.48
CLTCL1-203ENST00000449918 DDB1Q16531 1140 aa24.29■■□□□ 1.48
CLTCL1-203ENST00000449918 DISP2A7MBM2 1401 aa24.28■■□□□ 1.48
CLTCL1-203ENST00000449918 APBA3O96018 575 aa24.28■■□□□ 1.48
CLTCL1-203ENST00000449918 ABCC6O95255 1503 aa24.27■■□□□ 1.48
CLTCL1-203ENST00000449918 COG3Q96JB2 828 aa24.25■■□□□ 1.47
CLTCL1-203ENST00000449918 ANKRD36BQ8N2N9 1353 aa24.25■■□□□ 1.47
CLTCL1-203ENST00000449918 PARP4Q9UKK3 1724 aaKnown RBP24.24■■□□□ 1.47
CLTCL1-203ENST00000449918 CCDC7Q96M83 1385 aa24.24■■□□□ 1.47
CLTCL1-203ENST00000449918 USP54Q70EL1 1684 aa24.24■■□□□ 1.47
CLTCL1-203ENST00000449918 EZH2Q15910 746 aaKnown RBP24.23■■□□□ 1.47
CLTCL1-203ENST00000449918 CCER1Q8TC90 406 aaPredicted RBP24.23■■□□□ 1.47
CLTCL1-203ENST00000449918 CAMKK2Q96RR4 588 aa24.23■■□□□ 1.47
CLTCL1-203ENST00000449918 OVOS2A0A0J9YW53 1432 aa24.23■■□□□ 1.47
CLTCL1-203ENST00000449918 OVOS2Q6IE36 1432 aa24.23■■□□□ 1.47
CLTCL1-203ENST00000449918 PARD3Q8TEW0 1356 aa24.22■■□□□ 1.47
CLTCL1-203ENST00000449918 OVOS2A0A0G2JMS6 1433 aa24.21■■□□□ 1.47
CLTCL1-203ENST00000449918 ERBB3P21860 1342 aa24.21■■□□□ 1.47
CLTCL1-203ENST00000449918 EXOC5O00471 708 aa24.21■■□□□ 1.47
CLTCL1-203ENST00000449918 NLRP2Q9NX02 1062 aa24.21■■□□□ 1.47
CLTCL1-203ENST00000449918 TNS1Q9HBL0 1735 aaKnown RBP24.19■■□□□ 1.46
CLTCL1-203ENST00000449918 ANKRD24Q8TF21 1146 aa24.19■■□□□ 1.46
CLTCL1-203ENST00000449918 IP6K1Q92551 441 aa24.19■■□□□ 1.46
CLTCL1-203ENST00000449918 RGPD5Q99666 1765 aa24.19■■□□□ 1.46
CLTCL1-203ENST00000449918 PSDA5PKW4 1024 aaPredicted RBP24.18■■□□□ 1.46
CLTCL1-203ENST00000449918 MARCH10Q8NA82 808 aaPredicted RBP24.17■■□□□ 1.46
CLTCL1-203ENST00000449918 LRRC37A3O60309 1634 aa24.16■■□□□ 1.46
CLTCL1-203ENST00000449918 SRCAPQ6ZRS2 3230 aa24.15■■□□□ 1.46
CLTCL1-203ENST00000449918 FYB1O15117 783 aa24.15■■□□□ 1.46
CLTCL1-203ENST00000449918 AMPHP49418 695 aa24.14■■□□□ 1.45
CLTCL1-203ENST00000449918 R3HDM1Q15032 1099 aaKnown RBP24.14■■□□□ 1.45
CLTCL1-203ENST00000449918 BCL11BQ9C0K0 894 aaPredicted RBP24.14■■□□□ 1.45
CLTCL1-203ENST00000449918 BCL9O00512 1426 aa24.13■■□□□ 1.45
CLTCL1-203ENST00000449918 IL2RBP14784 551 aa24.13■■□□□ 1.45
CLTCL1-203ENST00000449918 LTN1O94822 1766 aa24.13■■□□□ 1.45
CLTCL1-203ENST00000449918 MAP3K19Q56UN5 1328 aa24.12■■□□□ 1.45
CLTCL1-203ENST00000449918 NBPF14Q5TI25 921 aa24.12■■□□□ 1.45
CLTCL1-203ENST00000449918 GGNBP2Q9H3C7 697 aa24.12■■□□□ 1.45
CLTCL1-203ENST00000449918 LTV1Q96GA3 475 aaPredicted RBP24.11■■□□□ 1.45
CLTCL1-203ENST00000449918 PEAK1Q9H792 1746 aa24.1■■□□□ 1.45
CLTCL1-203ENST00000449918 PLSCR1O15162 318 aa24.1■■□□□ 1.45
CLTCL1-203ENST00000449918 HOXC9P31274 260 aa24.1■■□□□ 1.45
CLTCL1-203ENST00000449918 WNK3Q9BYP7 1800 aa24.1■■□□□ 1.45
CLTCL1-203ENST00000449918 FBLN1P23142 703 aa24.09■■□□□ 1.45
CLTCL1-203ENST00000449918 TNS2Q63HR2 1409 aa24.09■■□□□ 1.45
CLTCL1-203ENST00000449918 EIF4G2P78344 907 aaKnown RBP eCLIP24.08■■□□□ 1.45
CLTCL1-203ENST00000449918 CARD14Q9BXL6 1004 aa24.07■■□□□ 1.44
CLTCL1-203ENST00000449918 RRS1Q15050 365 aaKnown RBP24.06■■□□□ 1.44
CLTCL1-203ENST00000449918 RTL1A6NKG5 1358 aa24.05■■□□□ 1.44
CLTCL1-203ENST00000449918 PTF1AQ7RTS3 328 aa24.05■■□□□ 1.44
CLTCL1-203ENST00000449918 POLR3GLQ9BT43 218 aa24.04■■□□□ 1.44
CLTCL1-203ENST00000449918 NSD3Q9BZ95 1437 aa24.02■■□□□ 1.44
CLTCL1-203ENST00000449918 SBF2Q86WG5 1849 aa24.01■■□□□ 1.43
CLTCL1-203ENST00000449918 HSPA5P11021 654 aaKnown RBP24.01■■□□□ 1.43
CLTCL1-203ENST00000449918 RREB1Q92766 1687 aa24■■□□□ 1.43
CLTCL1-203ENST00000449918 KCNQ2O43526 872 aa23.99■■□□□ 1.43
CLTCL1-203ENST00000449918 DDX54Q8TDD1 881 aaKnown RBP23.99■■□□□ 1.43
CLTCL1-203ENST00000449918 CGNL1Q0VF96 1302 aa23.99■■□□□ 1.43
CLTCL1-203ENST00000449918 KIF24Q5T7B8 1368 aa23.99■■□□□ 1.43
CLTCL1-203ENST00000449918 SMG6Q86US8 1419 aaKnown RBP23.99■■□□□ 1.43
CLTCL1-203ENST00000449918 LRP5O75197 1615 aa23.99■■□□□ 1.43
CLTCL1-203ENST00000449918 FAM208AQ9UK61 1670 aaKnown RBP23.99■■□□□ 1.43
CLTCL1-203ENST00000449918 ACSBG1Q96GR2 724 aa23.98■■□□□ 1.43
CLTCL1-203ENST00000449918 PROM2Q8N271 834 aa23.97■■□□□ 1.43
CLTCL1-203ENST00000449918 NUP188Q5SRE5 1749 aa23.96■■□□□ 1.43
CLTCL1-203ENST00000449918 MYOM1P52179 1685 aa23.96■■□□□ 1.43
CLTCL1-203ENST00000449918 INSRP06213 1382 aa23.96■■□□□ 1.43
CLTCL1-203ENST00000449918 FLT4P35916 1363 aa23.96■■□□□ 1.43
CLTCL1-203ENST00000449918 HSP90AB2PQ58FF8 381 aa23.96■■□□□ 1.43
CLTCL1-203ENST00000449918 NBPF6Q5VWK0 638 aa23.96■■□□□ 1.43
CLTCL1-203ENST00000449918 NBPF4Q96M43 638 aa23.96■■□□□ 1.43
CLTCL1-203ENST00000449918 RGPD3A6NKT7 1758 aaPredicted RBP23.96■■□□□ 1.43
CLTCL1-203ENST00000449918 RGPD4Q7Z3J3 1758 aa23.96■■□□□ 1.43
CLTCL1-203ENST00000449918 TXNRD1Q16881 649 aa23.95■■□□□ 1.42
CLTCL1-203ENST00000449918 KIF20BQ96Q89 1820 aa23.94■■□□□ 1.42
CLTCL1-203ENST00000449918 ZCRB1Q8TBF4 217 aaKnown RBP23.94■■□□□ 1.42
CLTCL1-203ENST00000449918 RAPGEF4Q8WZA2 1011 aa23.93■■□□□ 1.42
CLTCL1-203ENST00000449918 PPM1GO15355 546 aaPredicted RBP23.91■■□□□ 1.42
CLTCL1-203ENST00000449918 EMILIN1Q9Y6C2 1016 aa23.91■■□□□ 1.42
CLTCL1-203ENST00000449918 USHBP1Q8N6Y0 703 aa23.9■■□□□ 1.42
CLTCL1-203ENST00000449918 PANK3Q9H999 370 aa23.9■■□□□ 1.42
CLTCL1-203ENST00000449918 TATP17735 454 aaPredicted RBP23.89■■□□□ 1.41
CLTCL1-203ENST00000449918 ANO8Q9HCE9 1232 aaPredicted RBP23.89■■□□□ 1.41
CLTCL1-203ENST00000449918 STK32BQ9NY57 414 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms