RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 FAM98CQ17RN3 349 aaKnown RBP16.63■□□□□ 0.25
LSP1P3-201ENST00000449530 SEPT12Q8IYM1 358 aa16.63■□□□□ 0.25
LSP1P3-201ENST00000449530 ABCC6O95255 1503 aa16.63■□□□□ 0.25
LSP1P3-201ENST00000449530 EVA1CP58658 441 aa16.62■□□□□ 0.25
LSP1P3-201ENST00000449530 SPATA31A1Q5TZJ5 1347 aa16.62■□□□□ 0.25
LSP1P3-201ENST00000449530 LARP1Q6PKG0 1096 aaKnown RBP16.61■□□□□ 0.25
LSP1P3-201ENST00000449530 POLR3GLQ9BT43 218 aa16.61■□□□□ 0.25
LSP1P3-201ENST00000449530 ARHGEF25Q86VW2 580 aa16.6■□□□□ 0.25
LSP1P3-201ENST00000449530 USP35Q9P2H5 1018 aa16.6■□□□□ 0.25
LSP1P3-201ENST00000449530 CRB1P82279 1406 aa16.59■□□□□ 0.25
LSP1P3-201ENST00000449530 NSD3Q9BZ95 1437 aa16.59■□□□□ 0.25
LSP1P3-201ENST00000449530 ONECUT3O60422 494 aaPredicted RBP16.58■□□□□ 0.24
LSP1P3-201ENST00000449530 PARP4Q9UKK3 1724 aaKnown RBP16.58■□□□□ 0.24
LSP1P3-201ENST00000449530 LRRC37A3O60309 1634 aa16.56■□□□□ 0.24
LSP1P3-201ENST00000449530 KRT27Q7Z3Y8 459 aa16.56■□□□□ 0.24
LSP1P3-201ENST00000449530 COG3Q96JB2 828 aa16.56■□□□□ 0.24
LSP1P3-201ENST00000449530 AXIN2Q9Y2T1 843 aa16.56■□□□□ 0.24
LSP1P3-201ENST00000449530 WDR17Q8IZU2 1322 aa16.55■□□□□ 0.24
LSP1P3-201ENST00000449530 ANKRD26Q9UPS8 1709 aa16.55■□□□□ 0.24
LSP1P3-201ENST00000449530 FAM208AQ9UK61 1670 aaKnown RBP16.54■□□□□ 0.24
LSP1P3-201ENST00000449530 TOM1L2Q6ZVM7 507 aa16.54■□□□□ 0.24
LSP1P3-201ENST00000449530 TCP11L2Q8N4U5 519 aa16.54■□□□□ 0.24
LSP1P3-201ENST00000449530 CSB-PGBD3P0DP91 1061 aa16.53■□□□□ 0.24
LSP1P3-201ENST00000449530 SF3B2Q13435 895 aaKnown RBP16.53■□□□□ 0.24
LSP1P3-201ENST00000449530 BARGINQ6ZT62 677 aa16.53■□□□□ 0.24
LSP1P3-201ENST00000449530 CARD14Q9BXL6 1004 aa16.53■□□□□ 0.24
LSP1P3-201ENST00000449530 GGNBP2Q9H3C7 697 aa16.53■□□□□ 0.24
LSP1P3-201ENST00000449530 RGPD1P0DJD0 1748 aa16.53■□□□□ 0.24
LSP1P3-201ENST00000449530 BLMP54132 1417 aaPredicted RBP16.53■□□□□ 0.24
LSP1P3-201ENST00000449530 FYB1O15117 783 aa16.52■□□□□ 0.24
LSP1P3-201ENST00000449530 DEFB132Q7Z7B7 95 aa16.52■□□□□ 0.24
LSP1P3-201ENST00000449530 THRAP3Q9Y2W1 955 aaKnown RBP16.51■□□□□ 0.23
LSP1P3-201ENST00000449530 PEAK1Q9H792 1746 aa16.5■□□□□ 0.23
LSP1P3-201ENST00000449530 TNS1Q9HBL0 1735 aaKnown RBP16.5■□□□□ 0.23
LSP1P3-201ENST00000449530 ERBB3P21860 1342 aa16.5■□□□□ 0.23
LSP1P3-201ENST00000449530 C11orf95C9JLR9 678 aaPredicted RBP16.5■□□□□ 0.23
LSP1P3-201ENST00000449530 FAM182BQ5T319 152 aa16.5■□□□□ 0.23
LSP1P3-201ENST00000449530 MAP3K19Q56UN5 1328 aa16.49■□□□□ 0.23
LSP1P3-201ENST00000449530 RGPD2P0DJD1 1756 aa16.49■□□□□ 0.23
LSP1P3-201ENST00000449530 FBLN1P23142 703 aa16.49■□□□□ 0.23
LSP1P3-201ENST00000449530 RTL1A6NKG5 1358 aa16.48■□□□□ 0.23
LSP1P3-201ENST00000449530 CGNL1Q0VF96 1302 aa16.47■□□□□ 0.23
LSP1P3-201ENST00000449530 KIF7Q2M1P5 1343 aa16.47■□□□□ 0.23
LSP1P3-201ENST00000449530 DISP2A7MBM2 1401 aa16.47■□□□□ 0.23
LSP1P3-201ENST00000449530 RRS1Q15050 365 aaKnown RBP16.47■□□□□ 0.23
LSP1P3-201ENST00000449530 ANKRD24Q8TF21 1146 aa16.47■□□□□ 0.23
LSP1P3-201ENST00000449530 CARD10Q9BWT7 1032 aa16.47■□□□□ 0.23
LSP1P3-201ENST00000449530 LRP5O75197 1615 aa16.47■□□□□ 0.23
LSP1P3-201ENST00000449530 CCDC7Q96M83 1385 aa16.47■□□□□ 0.23
LSP1P3-201ENST00000449530 AMPHP49418 695 aa16.46■□□□□ 0.23
LSP1P3-201ENST00000449530 PDE3BQ13370 1112 aa16.46■□□□□ 0.23
LSP1P3-201ENST00000449530 IP6K1Q92551 441 aa16.46■□□□□ 0.23
LSP1P3-201ENST00000449530 NLRP2Q9NX02 1062 aa16.46■□□□□ 0.23
LSP1P3-201ENST00000449530 HOXC9P31274 260 aa16.45■□□□□ 0.22
LSP1P3-201ENST00000449530 LTV1Q96GA3 475 aaPredicted RBP16.45■□□□□ 0.22
LSP1P3-201ENST00000449530 PANK3Q9H999 370 aa16.45■□□□□ 0.22
LSP1P3-201ENST00000449530 PSDA5PKW4 1024 aaPredicted RBP16.44■□□□□ 0.22
LSP1P3-201ENST00000449530 MAP2P11137 1827 aaKnown RBP16.44■□□□□ 0.22
LSP1P3-201ENST00000449530 DDB1Q16531 1140 aa16.43■□□□□ 0.22
LSP1P3-201ENST00000449530 OVOS2A0A0G2JMS6 1433 aa16.43■□□□□ 0.22
LSP1P3-201ENST00000449530 TNS2Q63HR2 1409 aa16.43■□□□□ 0.22
LSP1P3-201ENST00000449530 SBF2Q86WG5 1849 aa16.42■□□□□ 0.22
LSP1P3-201ENST00000449530 CDCA7Q9BWT1 371 aaPredicted RBP16.42■□□□□ 0.22
LSP1P3-201ENST00000449530 SMG6Q86US8 1419 aaKnown RBP16.42■□□□□ 0.22
LSP1P3-201ENST00000449530 FLT4P35916 1363 aa16.41■□□□□ 0.22
LSP1P3-201ENST00000449530 FAM196AQ6ZSG2 479 aa16.41■□□□□ 0.22
LSP1P3-201ENST00000449530 NSD2O96028 1365 aa16.4■□□□□ 0.22
LSP1P3-201ENST00000449530 EMILIN1Q9Y6C2 1016 aa16.4■□□□□ 0.22
LSP1P3-201ENST00000449530 KIF24Q5T7B8 1368 aa16.39■□□□□ 0.21
LSP1P3-201ENST00000449530 INSRP06213 1382 aa16.38■□□□□ 0.21
LSP1P3-201ENST00000449530 TRIM37O94972 964 aa16.38■□□□□ 0.21
LSP1P3-201ENST00000449530 IL2RBP14784 551 aa16.38■□□□□ 0.21
LSP1P3-201ENST00000449530 TNNT2P45379 298 aaPredicted RBP16.38■□□□□ 0.21
LSP1P3-201ENST00000449530 BAG6P46379 1132 aa16.38■□□□□ 0.21
LSP1P3-201ENST00000449530 SHANK3Q9BYB0 1731 aa16.38■□□□□ 0.21
LSP1P3-201ENST00000449530 PPM1GO15355 546 aaPredicted RBP16.37■□□□□ 0.21
LSP1P3-201ENST00000449530 HSP90AB2PQ58FF8 381 aa16.37■□□□□ 0.21
LSP1P3-201ENST00000449530 KNSTRNQ9Y448 316 aa16.37■□□□□ 0.21
LSP1P3-201ENST00000449530 WASHC2AQ641Q2 1341 aa16.37■□□□□ 0.21
LSP1P3-201ENST00000449530 MEGF6O75095 1541 aa16.36■□□□□ 0.21
LSP1P3-201ENST00000449530 MARCH10Q8NA82 808 aaPredicted RBP16.36■□□□□ 0.21
LSP1P3-201ENST00000449530 NHSQ6T4R5 1651 aa16.36■□□□□ 0.21
LSP1P3-201ENST00000449530 RREB1Q92766 1687 aa16.36■□□□□ 0.21
LSP1P3-201ENST00000449530 EXOC5O00471 708 aa16.35■□□□□ 0.21
LSP1P3-201ENST00000449530 RGPD3A6NKT7 1758 aaPredicted RBP16.34■□□□□ 0.21
LSP1P3-201ENST00000449530 RGPD4Q7Z3J3 1758 aa16.34■□□□□ 0.21
LSP1P3-201ENST00000449530 USHBP1Q8N6Y0 703 aa16.34■□□□□ 0.21
LSP1P3-201ENST00000449530 NUP188Q5SRE5 1749 aa16.33■□□□□ 0.21
LSP1P3-201ENST00000449530 YY1P25490 414 aa16.33■□□□□ 0.2
LSP1P3-201ENST00000449530 EN1Q05925 392 aaPredicted RBP16.33■□□□□ 0.2
LSP1P3-201ENST00000449530 NBPF6Q5VWK0 638 aa16.33■□□□□ 0.2
LSP1P3-201ENST00000449530 NBPF4Q96M43 638 aa16.33■□□□□ 0.2
LSP1P3-201ENST00000449530 POLKQ9UBT6 870 aa16.33■□□□□ 0.2
LSP1P3-201ENST00000449530 DOT1LQ8TEK3 1739 aa16.33■□□□□ 0.2
LSP1P3-201ENST00000449530 BCL9O00512 1426 aa16.32■□□□□ 0.2
LSP1P3-201ENST00000449530 MORC1Q86VD1 984 aa16.32■□□□□ 0.2
LSP1P3-201ENST00000449530 APBA3O96018 575 aa16.31■□□□□ 0.2
LSP1P3-201ENST00000449530 R3HDM1Q15032 1099 aaKnown RBP16.31■□□□□ 0.2
LSP1P3-201ENST00000449530 AMER1Q5JTC6 1135 aaPredicted RBP16.31■□□□□ 0.2
LSP1P3-201ENST00000449530 PKD1L3Q7Z443 1732 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms