RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 CKAP2LQ8IYA6 745 aa14.95□□□□□ -0.02
UBE3B-204ENST00000449510 KDM4AO75164 1064 aa14.94□□□□□ -0.02
UBE3B-204ENST00000449510 AMPHP49418 695 aa14.94□□□□□ -0.02
UBE3B-204ENST00000449510 ZNF521Q96K83 1311 aa14.94□□□□□ -0.02
UBE3B-204ENST00000449510 FILIP1Q7Z7B0 1213 aa14.94□□□□□ -0.02
UBE3B-204ENST00000449510 SNX21Q969T3 373 aa14.94□□□□□ -0.02
UBE3B-204ENST00000449510 CWC27Q6UX04 472 aaKnown RBP14.94□□□□□ -0.02
UBE3B-204ENST00000449510 TMX3Q96JJ7 454 aa14.94□□□□□ -0.02
UBE3B-204ENST00000449510 DNMBPQ6XZF7 1577 aa14.93□□□□□ -0.02
UBE3B-204ENST00000449510 NRDCO43847 1150 aa14.93□□□□□ -0.02
UBE3B-204ENST00000449510 TCOF1Q13428 1488 aaKnown RBP14.93□□□□□ -0.02
UBE3B-204ENST00000449510 BLMP54132 1417 aaPredicted RBP14.93□□□□□ -0.02
UBE3B-204ENST00000449510 GNL2Q13823 731 aaKnown RBP14.93□□□□□ -0.02
UBE3B-204ENST00000449510 A0A0G2JS52 829 aa14.93□□□□□ -0.02
UBE3B-204ENST00000449510 ZMYM4Q5VZL5 1548 aa14.92□□□□□ -0.02
UBE3B-204ENST00000449510 LRSAM1Q6UWE0 723 aa14.92□□□□□ -0.02
UBE3B-204ENST00000449510 CREBRFQ8IUR6 639 aa14.92□□□□□ -0.02
UBE3B-204ENST00000449510 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.92□□□□□ -0.02
UBE3B-204ENST00000449510 V9GYY5 206 aaPredicted RBP14.92□□□□□ -0.02
UBE3B-204ENST00000449510 HOMER1Q86YM7 354 aa14.92□□□□□ -0.02
UBE3B-204ENST00000449510 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.92□□□□□ -0.02
UBE3B-204ENST00000449510 C8orf58Q8NAV2 365 aa14.92□□□□□ -0.02
UBE3B-204ENST00000449510 TMEM63CQ9P1W3 806 aa14.92□□□□□ -0.02
UBE3B-204ENST00000449510 MEIS3Q99687 375 aa14.91□□□□□ -0.02
UBE3B-204ENST00000449510 CT47B1P0C2W7 299 aaPredicted RBP14.91□□□□□ -0.02
UBE3B-204ENST00000449510 NOLC1Q14978 699 aaKnown RBP eCLIP14.91□□□□□ -0.02
UBE3B-204ENST00000449510 CCDC83Q8IWF9 413 aa14.91□□□□□ -0.02
UBE3B-204ENST00000449510 PHACTR3Q96KR7 559 aa14.91□□□□□ -0.02
UBE3B-204ENST00000449510 TFIP11Q9UBB9 837 aaKnown RBP14.91□□□□□ -0.02
UBE3B-204ENST00000449510 IQGAP2Q13576 1575 aa14.91□□□□□ -0.02
UBE3B-204ENST00000449510 BCORL1Q5H9F3 1711 aa14.91□□□□□ -0.02
UBE3B-204ENST00000449510 RBM25P49756 843 aaKnown RBP14.9□□□□□ -0.02
UBE3B-204ENST00000449510 SF3A1Q15459 793 aaKnown RBP14.9□□□□□ -0.02
UBE3B-204ENST00000449510 SKIDA1Q1XH10 827 aa14.9□□□□□ -0.02
UBE3B-204ENST00000449510 FAM184AQ8NB25 1140 aa14.9□□□□□ -0.02
UBE3B-204ENST00000449510 DYNC1I1O14576 645 aa14.9□□□□□ -0.02
UBE3B-204ENST00000449510 TRMT2AQ8IZ69 625 aaKnown RBP14.9□□□□□ -0.02
UBE3B-204ENST00000449510 CDK19Q9BWU1 502 aa14.9□□□□□ -0.02
UBE3B-204ENST00000449510 URB2Q14146 1524 aaKnown RBP14.9□□□□□ -0.02
UBE3B-204ENST00000449510 SCAPERQ9BY12 1400 aa14.9□□□□□ -0.02
UBE3B-204ENST00000449510 MBIPQ9NS73 344 aa14.9□□□□□ -0.02
UBE3B-204ENST00000449510 NUP153P49790 1475 aaKnown RBP14.9□□□□□ -0.02
UBE3B-204ENST00000449510 TRMT1Q9NXH9 659 aaKnown RBP14.89□□□□□ -0.03
UBE3B-204ENST00000449510 WDR33Q9C0J8 1336 aaKnown RBP14.89□□□□□ -0.03
UBE3B-204ENST00000449510 ZKSCAN1P17029 563 aaPredicted RBP14.89□□□□□ -0.03
UBE3B-204ENST00000449510 TTC22Q5TAA0 569 aa14.89□□□□□ -0.03
UBE3B-204ENST00000449510 WAPLQ7Z5K2 1190 aa14.89□□□□□ -0.03
UBE3B-204ENST00000449510 SPG7Q9UQ90 795 aa14.89□□□□□ -0.03
UBE3B-204ENST00000449510 CNPY2Q9Y2B0 182 aa14.89□□□□□ -0.03
UBE3B-204ENST00000449510 MAGI2Q86UL8 1455 aa14.89□□□□□ -0.03
UBE3B-204ENST00000449510 USP48Q86UV5 1035 aa14.89□□□□□ -0.03
UBE3B-204ENST00000449510 FAM177A1Q8N128 213 aaPredicted RBP14.89□□□□□ -0.03
UBE3B-204ENST00000449510 TCEANC2Q96MN5 208 aa14.89□□□□□ -0.03
UBE3B-204ENST00000449510 LMBRD1Q9NUN5 540 aa14.88□□□□□ -0.03
UBE3B-204ENST00000449510 NOL7Q9UMY1 257 aaKnown RBP14.88□□□□□ -0.03
UBE3B-204ENST00000449510 NFE2L2Q16236 605 aa14.88□□□□□ -0.03
UBE3B-204ENST00000449510 PLEKHM2Q8IWE5 1019 aa14.88□□□□□ -0.03
UBE3B-204ENST00000449510 LRRCC1Q9C099 1032 aa14.88□□□□□ -0.03
UBE3B-204ENST00000449510 ZNF330Q9Y3S2 320 aaPredicted RBP14.88□□□□□ -0.03
UBE3B-204ENST00000449510 UBTFL1P0CB47 393 aaPredicted RBP14.87□□□□□ -0.03
UBE3B-204ENST00000449510 GADD45BO75293 160 aaPredicted RBP14.87□□□□□ -0.03
UBE3B-204ENST00000449510 FCHSD2O94868 740 aa14.87□□□□□ -0.03
UBE3B-204ENST00000449510 CPA1P15085 419 aa14.87□□□□□ -0.03
UBE3B-204ENST00000449510 CCDC112Q8NEF3 446 aa14.87□□□□□ -0.03
UBE3B-204ENST00000449510 STK11IPQ8N1F8 1099 aa14.87□□□□□ -0.03
UBE3B-204ENST00000449510 NGDNQ8NEJ9 315 aaKnown RBP14.87□□□□□ -0.03
UBE3B-204ENST00000449510 C9orf78Q9NZ63 289 aaPredicted RBP14.87□□□□□ -0.03
UBE3B-204ENST00000449510 CC2D2AQ9P2K1 1620 aa14.87□□□□□ -0.03
UBE3B-204ENST00000449510 COL17A1Q9UMD9 1497 aaPredicted RBP14.87□□□□□ -0.03
UBE3B-204ENST00000449510 ASXL1Q8IXJ9 1541 aa14.86□□□□□ -0.03
UBE3B-204ENST00000449510 GNAI2P04899 355 aa14.86□□□□□ -0.03
UBE3B-204ENST00000449510 LARP1BQ659C4 914 aaKnown RBP14.86□□□□□ -0.03
UBE3B-204ENST00000449510 NSFL1CQ9UNZ2 370 aaKnown RBP14.86□□□□□ -0.03
UBE3B-204ENST00000449510 MAGI1Q96QZ7 1491 aaPredicted RBP14.86□□□□□ -0.03
UBE3B-204ENST00000449510 ZBTB7BO15156 539 aaPredicted RBP14.86□□□□□ -0.03
UBE3B-204ENST00000449510 IFIT2P09913 472 aaKnown RBP14.86□□□□□ -0.03
UBE3B-204ENST00000449510 UHRF1BP1Q6BDS2 1440 aa14.86□□□□□ -0.03
UBE3B-204ENST00000449510 ZNF608Q9ULD9 1512 aaPredicted RBP14.86□□□□□ -0.03
UBE3B-204ENST00000449510 CCDC192P0DO97 292 aa14.86□□□□□ -0.03
UBE3B-204ENST00000449510 CASTP20810 708 aaKnown RBP14.86□□□□□ -0.03
UBE3B-204ENST00000449510 NME9Q86XW9 330 aa14.86□□□□□ -0.03
UBE3B-204ENST00000449510 JAKMIP1Q96N16 626 aaKnown RBP14.86□□□□□ -0.03
UBE3B-204ENST00000449510 ZRANB1Q9UGI0 708 aa14.86□□□□□ -0.03
UBE3B-204ENST00000449510 AIMP1Q12904 312 aaKnown RBP14.85□□□□□ -0.03
UBE3B-204ENST00000449510 STAC3Q96MF2 364 aa14.85□□□□□ -0.03
UBE3B-204ENST00000449510 USP26Q9BXU7 913 aa14.85□□□□□ -0.03
UBE3B-204ENST00000449510 TNMDQ9H2S6 317 aa14.85□□□□□ -0.03
UBE3B-204ENST00000449510 TRIM35Q9UPQ4 493 aa14.85□□□□□ -0.03
UBE3B-204ENST00000449510 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.85□□□□□ -0.03
UBE3B-204ENST00000449510 DDX11Q96FC9 970 aa14.85□□□□□ -0.03
UBE3B-204ENST00000449510 SCAF11Q99590 1463 aaKnown RBP14.85□□□□□ -0.03
UBE3B-204ENST00000449510 GPT2Q8TD30 523 aa14.85□□□□□ -0.03
UBE3B-204ENST00000449510 A2MP01023 1474 aa14.85□□□□□ -0.03
UBE3B-204ENST00000449510 FYB1O15117 783 aa14.84□□□□□ -0.03
UBE3B-204ENST00000449510 VAMP4O75379 141 aa14.84□□□□□ -0.03
UBE3B-204ENST00000449510 TXNDC2Q86VQ3 553 aa14.84□□□□□ -0.03
UBE3B-204ENST00000449510 MCM2P49736 904 aa14.84□□□□□ -0.03
UBE3B-204ENST00000449510 NECAB1Q8N987 351 aa14.84□□□□□ -0.03
UBE3B-204ENST00000449510 U2AF2P26368 475 aaKnown RBP eCLIP14.84□□□□□ -0.034e-7■■■□□ 17.3
UBE3B-204ENST00000449510 ALDH1L2Q3SY69 923 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 505.8 ms