RNA–Protein interactions for RNA: ENST00000449415.5

RFTN1-205, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 3

Gene RFTN1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-205ENST00000449415 LTN1O94822 1766 aa25■■□□□ 1.59
RFTN1-205ENST00000449415 AXIN2Q9Y2T1 843 aa24.99■■□□□ 1.59
RFTN1-205ENST00000449415 OVOS2A0A0J9YW53 1432 aa24.98■■□□□ 1.59
RFTN1-205ENST00000449415 OVOS2Q6IE36 1432 aa24.98■■□□□ 1.59
RFTN1-205ENST00000449415 KRT27Q7Z3Y8 459 aa24.97■■□□□ 1.59
RFTN1-205ENST00000449415 THSD7AQ9UPZ6 1657 aa24.97■■□□□ 1.59
RFTN1-205ENST00000449415 KIF20BQ96Q89 1820 aa24.96■■□□□ 1.59
RFTN1-205ENST00000449415 COG3Q96JB2 828 aa24.95■■□□□ 1.58
RFTN1-205ENST00000449415 TOM1L2Q6ZVM7 507 aa24.93■■□□□ 1.58
RFTN1-205ENST00000449415 TCP11L2Q8N4U5 519 aa24.93■■□□□ 1.58
RFTN1-205ENST00000449415 GGNBP2Q9H3C7 697 aa24.93■■□□□ 1.58
RFTN1-205ENST00000449415 CRB1P82279 1406 aa24.93■■□□□ 1.58
RFTN1-205ENST00000449415 CSB-PGBD3P0DP91 1061 aa24.92■■□□□ 1.58
RFTN1-205ENST00000449415 FAM182BQ5T319 152 aa24.92■■□□□ 1.58
RFTN1-205ENST00000449415 CARD14Q9BXL6 1004 aa24.92■■□□□ 1.58
RFTN1-205ENST00000449415 FYB1O15117 783 aa24.91■■□□□ 1.58
RFTN1-205ENST00000449415 NSD3Q9BZ95 1437 aa24.91■■□□□ 1.58
RFTN1-205ENST00000449415 WDR17Q8IZU2 1322 aa24.9■■□□□ 1.58
RFTN1-205ENST00000449415 FBLN1P23142 703 aa24.9■■□□□ 1.58
RFTN1-205ENST00000449415 BARGINQ6ZT62 677 aa24.9■■□□□ 1.58
RFTN1-205ENST00000449415 C11orf95C9JLR9 678 aaPredicted RBP24.89■■□□□ 1.58
RFTN1-205ENST00000449415 ABCC6O95255 1503 aa24.88■■□□□ 1.57
RFTN1-205ENST00000449415 THRAP3Q9Y2W1 955 aaKnown RBP24.87■■□□□ 1.57
RFTN1-205ENST00000449415 EP400Q96L91 3159 aa24.86■■□□□ 1.57
RFTN1-205ENST00000449415 WNK3Q9BYP7 1800 aa24.86■■□□□ 1.57
RFTN1-205ENST00000449415 PARP4Q9UKK3 1724 aaKnown RBP24.83■■□□□ 1.57
RFTN1-205ENST00000449415 PDE3BQ13370 1112 aa24.83■■□□□ 1.57
RFTN1-205ENST00000449415 MAP3K19Q56UN5 1328 aa24.83■■□□□ 1.56
RFTN1-205ENST00000449415 BLMP54132 1417 aaPredicted RBP24.82■■□□□ 1.56
RFTN1-205ENST00000449415 RRS1Q15050 365 aaKnown RBP24.82■■□□□ 1.56
RFTN1-205ENST00000449415 CCDC125Q86Z20 511 aa24.82■■□□□ 1.56
RFTN1-205ENST00000449415 ANKRD24Q8TF21 1146 aa24.82■■□□□ 1.56
RFTN1-205ENST00000449415 LTV1Q96GA3 475 aaPredicted RBP24.82■■□□□ 1.56
RFTN1-205ENST00000449415 CARD10Q9BWT7 1032 aa24.82■■□□□ 1.56
RFTN1-205ENST00000449415 ERBB3P21860 1342 aa24.82■■□□□ 1.56
RFTN1-205ENST00000449415 AMPHP49418 695 aa24.81■■□□□ 1.56
RFTN1-205ENST00000449415 IP6K1Q92551 441 aa24.81■■□□□ 1.56
RFTN1-205ENST00000449415 PANK3Q9H999 370 aa24.81■■□□□ 1.56
RFTN1-205ENST00000449415 NLRP2Q9NX02 1062 aa24.81■■□□□ 1.56
RFTN1-205ENST00000449415 SF3B2Q13435 895 aaKnown RBP24.8■■□□□ 1.56
RFTN1-205ENST00000449415 LRRC37A3O60309 1634 aa24.79■■□□□ 1.56
RFTN1-205ENST00000449415 HOXC9P31274 260 aa24.78■■□□□ 1.56
RFTN1-205ENST00000449415 CGNL1Q0VF96 1302 aa24.78■■□□□ 1.56
RFTN1-205ENST00000449415 DEFB132Q7Z7B7 95 aa24.77■■□□□ 1.56
RFTN1-205ENST00000449415 KIF7Q2M1P5 1343 aa24.77■■□□□ 1.56
RFTN1-205ENST00000449415 RGPD1P0DJD0 1748 aa24.76■■□□□ 1.55
RFTN1-205ENST00000449415 RGPD2P0DJD1 1756 aa24.76■■□□□ 1.55
RFTN1-205ENST00000449415 DDB1Q16531 1140 aa24.76■■□□□ 1.55
RFTN1-205ENST00000449415 CCDC7Q96M83 1385 aa24.76■■□□□ 1.55
RFTN1-205ENST00000449415 FAM196AQ6ZSG2 479 aa24.75■■□□□ 1.55
RFTN1-205ENST00000449415 ANKRD26Q9UPS8 1709 aa24.75■■□□□ 1.55
RFTN1-205ENST00000449415 FAM208AQ9UK61 1670 aaKnown RBP24.74■■□□□ 1.55
RFTN1-205ENST00000449415 PEAK1Q9H792 1746 aa24.74■■□□□ 1.55
RFTN1-205ENST00000449415 MAP2P11137 1827 aaKnown RBP24.73■■□□□ 1.55
RFTN1-205ENST00000449415 DISP2A7MBM2 1401 aa24.73■■□□□ 1.55
RFTN1-205ENST00000449415 CDCA7Q9BWT1 371 aaPredicted RBP24.73■■□□□ 1.55
RFTN1-205ENST00000449415 TRIM37O94972 964 aa24.72■■□□□ 1.55
RFTN1-205ENST00000449415 TNS1Q9HBL0 1735 aaKnown RBP24.72■■□□□ 1.55
RFTN1-205ENST00000449415 RTL1A6NKG5 1358 aa24.71■■□□□ 1.55
RFTN1-205ENST00000449415 TNNT2P45379 298 aaPredicted RBP24.7■■□□□ 1.54
RFTN1-205ENST00000449415 EMILIN1Q9Y6C2 1016 aa24.7■■□□□ 1.54
RFTN1-205ENST00000449415 EXOC5O00471 708 aa24.69■■□□□ 1.54
RFTN1-205ENST00000449415 PPM1GO15355 546 aaPredicted RBP24.69■■□□□ 1.54
RFTN1-205ENST00000449415 IL2RBP14784 551 aa24.68■■□□□ 1.54
RFTN1-205ENST00000449415 BAG6P46379 1132 aa24.68■■□□□ 1.54
RFTN1-205ENST00000449415 HSP90AB2PQ58FF8 381 aa24.68■■□□□ 1.54
RFTN1-205ENST00000449415 MARCH10Q8NA82 808 aaPredicted RBP24.67■■□□□ 1.54
RFTN1-205ENST00000449415 OVOS2A0A0G2JMS6 1433 aa24.67■■□□□ 1.54
RFTN1-205ENST00000449415 FLT4P35916 1363 aa24.67■■□□□ 1.54
RFTN1-205ENST00000449415 SBF2Q86WG5 1849 aa24.66■■□□□ 1.54
RFTN1-205ENST00000449415 KNSTRNQ9Y448 316 aa24.66■■□□□ 1.54
RFTN1-205ENST00000449415 EN1Q05925 392 aaPredicted RBP24.65■■□□□ 1.54
RFTN1-205ENST00000449415 TNS2Q63HR2 1409 aa24.64■■□□□ 1.54
RFTN1-205ENST00000449415 SMG6Q86US8 1419 aaKnown RBP24.64■■□□□ 1.54
RFTN1-205ENST00000449415 INSRP06213 1382 aa24.64■■□□□ 1.53
RFTN1-205ENST00000449415 USHBP1Q8N6Y0 703 aa24.63■■□□□ 1.53
RFTN1-205ENST00000449415 WASHC2AQ641Q2 1341 aa24.62■■□□□ 1.53
RFTN1-205ENST00000449415 APBA3O96018 575 aa24.62■■□□□ 1.53
RFTN1-205ENST00000449415 NBPF6Q5VWK0 638 aa24.62■■□□□ 1.53
RFTN1-205ENST00000449415 NBPF4Q96M43 638 aa24.62■■□□□ 1.53
RFTN1-205ENST00000449415 KIF24Q5T7B8 1368 aa24.62■■□□□ 1.53
RFTN1-205ENST00000449415 POLKQ9UBT6 870 aa24.61■■□□□ 1.53
RFTN1-205ENST00000449415 NSD2O96028 1365 aa24.6■■□□□ 1.53
RFTN1-205ENST00000449415 MORC1Q86VD1 984 aa24.6■■□□□ 1.53
RFTN1-205ENST00000449415 KAT6BQ8WYB5 2073 aa24.6■■□□□ 1.53
RFTN1-205ENST00000449415 EZH2Q15910 746 aaKnown RBP24.58■■□□□ 1.53
RFTN1-205ENST00000449415 PTF1AQ7RTS3 328 aa24.57■■□□□ 1.52
RFTN1-205ENST00000449415 MEGF6O75095 1541 aa24.56■■□□□ 1.52
RFTN1-205ENST00000449415 AMER1Q5JTC6 1135 aaPredicted RBP24.56■■□□□ 1.52
RFTN1-205ENST00000449415 CNGB1Q14028 1251 aaPredicted RBP24.55■■□□□ 1.52
RFTN1-205ENST00000449415 DDX54Q8TDD1 881 aaKnown RBP24.55■■□□□ 1.52
RFTN1-205ENST00000449415 ACSBG1Q96GR2 724 aa24.54■■□□□ 1.52
RFTN1-205ENST00000449415 CAMKK2Q96RR4 588 aa24.54■■□□□ 1.52
RFTN1-205ENST00000449415 SHANK3Q9BYB0 1731 aa24.53■■□□□ 1.52
RFTN1-205ENST00000449415 PER1O15534 1290 aaPredicted RBP24.53■■□□□ 1.52
RFTN1-205ENST00000449415 RAPGEF4Q8WZA2 1011 aa24.53■■□□□ 1.52
RFTN1-205ENST00000449415 BCL9O00512 1426 aa24.52■■□□□ 1.52
RFTN1-205ENST00000449415 CC2D1BQ5T0F9 858 aaKnown RBP24.52■■□□□ 1.52
RFTN1-205ENST00000449415 BCL11BQ9C0K0 894 aaPredicted RBP24.52■■□□□ 1.52
RFTN1-205ENST00000449415 ZCRB1Q8TBF4 217 aaKnown RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms