RNA–Protein interactions for RNA: ENST00000449405.1

LINC01939-202, Transcript of long intergenic non-protein coding RNA 1939, humanhuman

TSL 3

Gene LINC01939, Length 368 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01939-202ENST00000449405 ZNF692Q9BU19 519 aaPredicted RBP22.04■■□□□ 1.12
LINC01939-202ENST00000449405 TTC21BQ7Z4L5 1316 aa22.04■■□□□ 1.12
LINC01939-202ENST00000449405 WDR17Q8IZU2 1322 aa22.04■■□□□ 1.12
LINC01939-202ENST00000449405 CDCA7Q9BWT1 371 aaPredicted RBP22.01■■□□□ 1.11
LINC01939-202ENST00000449405 ANO8Q9HCE9 1232 aaPredicted RBP22.01■■□□□ 1.11
LINC01939-202ENST00000449405 PIK3C2AO00443 1686 aa22.01■■□□□ 1.11
LINC01939-202ENST00000449405 KCNH5Q8NCM2 988 aa22■■□□□ 1.11
LINC01939-202ENST00000449405 CARD10Q9BWT7 1032 aa22■■□□□ 1.11
LINC01939-202ENST00000449405 PPP1R1BQ9UD71 204 aaPredicted RBP22■■□□□ 1.11
LINC01939-202ENST00000449405 LRRC37A3O60309 1634 aa21.99■■□□□ 1.11
LINC01939-202ENST00000449405 BCL9O00512 1426 aa21.99■■□□□ 1.11
LINC01939-202ENST00000449405 YY1P25490 414 aa21.99■■□□□ 1.11
LINC01939-202ENST00000449405 SIN3AQ96ST3 1273 aa21.99■■□□□ 1.11
LINC01939-202ENST00000449405 PDGFDQ9GZP0 370 aaPredicted RBP21.99■■□□□ 1.11
LINC01939-202ENST00000449405 CPSF1Q10570 1443 aaKnown RBP21.97■■□□□ 1.11
LINC01939-202ENST00000449405 SOX12O15370 315 aa21.97■■□□□ 1.11
LINC01939-202ENST00000449405 RGPD3A6NKT7 1758 aaPredicted RBP21.97■■□□□ 1.11
LINC01939-202ENST00000449405 RGPD4Q7Z3J3 1758 aa21.97■■□□□ 1.11
LINC01939-202ENST00000449405 RGPD5Q99666 1765 aa21.97■■□□□ 1.11
LINC01939-202ENST00000449405 EXOC5O00471 708 aa21.96■■□□□ 1.11
LINC01939-202ENST00000449405 TTC21AQ8NDW8 1320 aa21.96■■□□□ 1.11
LINC01939-202ENST00000449405 CSB-PGBD3P0DP91 1061 aa21.95■■□□□ 1.1
LINC01939-202ENST00000449405 NINLQ9Y2I6 1382 aa21.95■■□□□ 1.1
LINC01939-202ENST00000449405 TXNRD1Q16881 649 aa21.93■■□□□ 1.1
LINC01939-202ENST00000449405 TRPM1Q7Z4N2 1603 aa21.93■■□□□ 1.1
LINC01939-202ENST00000449405 AKAP12Q02952 1782 aa21.92■■□□□ 1.1
LINC01939-202ENST00000449405 WNK3Q9BYP7 1800 aa21.92■■□□□ 1.1
LINC01939-202ENST00000449405 ROCK2O75116 1388 aaKnown RBP21.91■■□□□ 1.1
LINC01939-202ENST00000449405 NEUROD1Q13562 356 aa21.91■■□□□ 1.1
LINC01939-202ENST00000449405 CASZ1Q86V15 1759 aa21.91■■□□□ 1.1
LINC01939-202ENST00000449405 KTN1Q86UP2 1357 aaKnown RBP21.9■■□□□ 1.1
LINC01939-202ENST00000449405 DCAF8L1A6NGE4 600 aa21.9■■□□□ 1.1
LINC01939-202ENST00000449405 ZBTB7AO95365 584 aa21.9■■□□□ 1.1
LINC01939-202ENST00000449405 PTGER2P43116 358 aa21.9■■□□□ 1.1
LINC01939-202ENST00000449405 NFAT5O94916 1531 aa21.9■■□□□ 1.1
LINC01939-202ENST00000449405 SLC15A2Q16348 729 aa21.89■■□□□ 1.09
LINC01939-202ENST00000449405 ATF5Q9Y2D1 282 aaPredicted RBP21.89■■□□□ 1.09
LINC01939-202ENST00000449405 CCDC7Q96M83 1385 aa21.88■■□□□ 1.09
LINC01939-202ENST00000449405 USP31Q70CQ4 1352 aa21.87■■□□□ 1.09
LINC01939-202ENST00000449405 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.87■■□□□ 1.09
LINC01939-202ENST00000449405 STK32BQ9NY57 414 aa21.87■■□□□ 1.09
LINC01939-202ENST00000449405 NME9Q86XW9 330 aa21.84■■□□□ 1.09
LINC01939-202ENST00000449405 UTRNP46939 3433 aa21.83■■□□□ 1.09
LINC01939-202ENST00000449405 ACSBG1Q96GR2 724 aa21.83■■□□□ 1.09
LINC01939-202ENST00000449405 NLRP2Q9NX02 1062 aa21.83■■□□□ 1.09
LINC01939-202ENST00000449405 ERBB3P21860 1342 aa21.82■■□□□ 1.08
LINC01939-202ENST00000449405 ABCC6O95255 1503 aa21.82■■□□□ 1.08
LINC01939-202ENST00000449405 SGIP1Q9BQI5 828 aa21.82■■□□□ 1.08
LINC01939-202ENST00000449405 SLC12A5Q9H2X9 1139 aa21.82■■□□□ 1.08
LINC01939-202ENST00000449405 SBNO2Q9Y2G9 1366 aa21.82■■□□□ 1.08
LINC01939-202ENST00000449405 CD163L1Q9NR16 1453 aa21.82■■□□□ 1.08
LINC01939-202ENST00000449405 TNS2Q63HR2 1409 aa21.81■■□□□ 1.08
LINC01939-202ENST00000449405 SYT17Q9BSW7 474 aa21.81■■□□□ 1.08
LINC01939-202ENST00000449405 MON2Q7Z3U7 1717 aa21.8■■□□□ 1.08
LINC01939-202ENST00000449405 IL2RBP14784 551 aa21.8■■□□□ 1.08
LINC01939-202ENST00000449405 MTFR1LQ9H019 292 aa21.8■■□□□ 1.08
LINC01939-202ENST00000449405 TMC1Q8TDI8 760 aa21.79■■□□□ 1.08
LINC01939-202ENST00000449405 ANKRD24Q8TF21 1146 aa21.79■■□□□ 1.08
LINC01939-202ENST00000449405 FHDC1Q9C0D6 1143 aaPredicted RBP21.79■■□□□ 1.08
LINC01939-202ENST00000449405 KAT6BQ8WYB5 2073 aa21.78■■□□□ 1.08
LINC01939-202ENST00000449405 MYOM1P52179 1685 aa21.78■■□□□ 1.08
LINC01939-202ENST00000449405 CARD11Q9BXL7 1154 aa21.77■■□□□ 1.08
LINC01939-202ENST00000449405 USP54Q70EL1 1684 aa21.76■■□□□ 1.07
LINC01939-202ENST00000449405 HDGFL2Q7Z4V5 671 aaPredicted RBP21.76■■□□□ 1.07
LINC01939-202ENST00000449405 LRRC4BQ9NT99 713 aa21.76■■□□□ 1.07
LINC01939-202ENST00000449405 NHSQ6T4R5 1651 aa21.75■■□□□ 1.07
LINC01939-202ENST00000449405 ZNF827Q17R98 1081 aa21.73■■□□□ 1.07
LINC01939-202ENST00000449405 IP6K1Q92551 441 aa21.73■■□□□ 1.07
LINC01939-202ENST00000449405 PUS7Q96PZ0 661 aaKnown RBP21.73■■□□□ 1.07
LINC01939-202ENST00000449405 ARXQ96QS3 562 aa21.73■■□□□ 1.07
LINC01939-202ENST00000449405 LTN1O94822 1766 aa21.73■■□□□ 1.07
LINC01939-202ENST00000449405 ZNF784Q8NCA9 323 aaPredicted RBP21.72■■□□□ 1.07
LINC01939-202ENST00000449405 TERF2IPQ9NYB0 399 aa21.72■■□□□ 1.07
LINC01939-202ENST00000449405 EDC4Q6P2E9 1401 aaKnown RBP21.72■■□□□ 1.07
LINC01939-202ENST00000449405 BTAF1O14981 1849 aa21.71■■□□□ 1.07
LINC01939-202ENST00000449405 PAPPAQ13219 1627 aa21.7■■□□□ 1.06
LINC01939-202ENST00000449405 AKT1S1Q96B36 256 aa21.7■■□□□ 1.06
LINC01939-202ENST00000449405 A0A1W2PP64 1363 aa21.7■■□□□ 1.06
LINC01939-202ENST00000449405 DDX54Q8TDD1 881 aaKnown RBP21.69■■□□□ 1.06
LINC01939-202ENST00000449405 LTV1Q96GA3 475 aaPredicted RBP21.68■■□□□ 1.06
LINC01939-202ENST00000449405 FBLN1P23142 703 aa21.66■■□□□ 1.06
LINC01939-202ENST00000449405 SLC27A3Q5K4L6 730 aa21.66■■□□□ 1.06
LINC01939-202ENST00000449405 MAP3K5Q99683 1374 aa21.65■■□□□ 1.06
LINC01939-202ENST00000449405 TESK2Q96S53 571 aa21.65■■□□□ 1.06
LINC01939-202ENST00000449405 PRIM1P49642 420 aaKnown RBP21.64■■□□□ 1.05
LINC01939-202ENST00000449405 SLC16A10Q8TF71 515 aa21.64■■□□□ 1.05
LINC01939-202ENST00000449405 CHD4Q14839 1912 aa21.63■■□□□ 1.05
LINC01939-202ENST00000449405 MAP3K19Q56UN5 1328 aa21.63■■□□□ 1.05
LINC01939-202ENST00000449405 KCNQ4P56696 695 aa21.63■■□□□ 1.05
LINC01939-202ENST00000449405 HOXC9P31274 260 aa21.62■■□□□ 1.05
LINC01939-202ENST00000449405 PNPLA7Q6ZV29 1317 aa21.61■■□□□ 1.05
LINC01939-202ENST00000449405 COG3Q96JB2 828 aa21.61■■□□□ 1.05
LINC01939-202ENST00000449405 ST20-MTHFSA0A0A6YYL1 179 aa21.6■■□□□ 1.05
LINC01939-202ENST00000449405 ZCRB1Q8TBF4 217 aaKnown RBP21.6■■□□□ 1.05
LINC01939-202ENST00000449405 AMPHP49418 695 aa21.59■■□□□ 1.05
LINC01939-202ENST00000449405 SYTL4Q96C24 671 aaPredicted RBP21.59■■□□□ 1.05
LINC01939-202ENST00000449405 ANKRD36BQ8N2N9 1353 aa21.59■■□□□ 1.05
LINC01939-202ENST00000449405 GPR162Q16538 588 aa21.58■■□□□ 1.05
LINC01939-202ENST00000449405 TFCP2L1Q9NZI6 479 aa21.58■■□□□ 1.05
LINC01939-202ENST00000449405 GOLGB1Q14789 3259 aaKnown RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms