RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 A0A1W2PP64 1363 aa24.88■■□□□ 1.57
DDX56-207ENST00000448192 CLSPNQ9HAW4 1339 aa24.87■■□□□ 1.57
DDX56-207ENST00000448192 EDC4Q6P2E9 1401 aaKnown RBP24.87■■□□□ 1.57
DDX56-207ENST00000448192 BAG6P46379 1132 aa24.87■■□□□ 1.57
DDX56-207ENST00000448192 TOM1L2Q6ZVM7 507 aa24.87■■□□□ 1.57
DDX56-207ENST00000448192 USP54Q70EL1 1684 aa24.87■■□□□ 1.57
DDX56-207ENST00000448192 USP31Q70CQ4 1352 aa24.86■■□□□ 1.57
DDX56-207ENST00000448192 TIMELESSQ9UNS1 1208 aa24.86■■□□□ 1.57
DDX56-207ENST00000448192 FAM196AQ6ZSG2 479 aa24.85■■□□□ 1.57
DDX56-207ENST00000448192 PARP4Q9UKK3 1724 aaKnown RBP24.85■■□□□ 1.57
DDX56-207ENST00000448192 TNS1Q9HBL0 1735 aaKnown RBP24.84■■□□□ 1.57
DDX56-207ENST00000448192 LTN1O94822 1766 aa24.84■■□□□ 1.57
DDX56-207ENST00000448192 WDR17Q8IZU2 1322 aa24.84■■□□□ 1.57
DDX56-207ENST00000448192 NINLQ9Y2I6 1382 aa24.83■■□□□ 1.57
DDX56-207ENST00000448192 TMF1P82094 1093 aa24.83■■□□□ 1.57
DDX56-207ENST00000448192 CSB-PGBD3P0DP91 1061 aa24.82■■□□□ 1.56
DDX56-207ENST00000448192 TRIM37O94972 964 aa24.81■■□□□ 1.56
DDX56-207ENST00000448192 WNK3Q9BYP7 1800 aa24.81■■□□□ 1.56
DDX56-207ENST00000448192 EN1Q05925 392 aaPredicted RBP24.8■■□□□ 1.56
DDX56-207ENST00000448192 CCER1Q8TC90 406 aaPredicted RBP24.79■■□□□ 1.56
DDX56-207ENST00000448192 ABCC6O95255 1503 aa24.78■■□□□ 1.56
DDX56-207ENST00000448192 LRRC37A3O60309 1634 aa24.78■■□□□ 1.56
DDX56-207ENST00000448192 DDB1Q16531 1140 aa24.76■■□□□ 1.55
DDX56-207ENST00000448192 CARD10Q9BWT7 1032 aa24.76■■□□□ 1.55
DDX56-207ENST00000448192 OVOS2A0A0J9YW53 1432 aa24.76■■□□□ 1.55
DDX56-207ENST00000448192 OVOS2Q6IE36 1432 aa24.76■■□□□ 1.55
DDX56-207ENST00000448192 ANKRD36BQ8N2N9 1353 aa24.75■■□□□ 1.55
DDX56-207ENST00000448192 DISP2A7MBM2 1401 aa24.73■■□□□ 1.55
DDX56-207ENST00000448192 APBA3O96018 575 aa24.73■■□□□ 1.55
DDX56-207ENST00000448192 CDCA8Q53HL2 280 aa24.73■■□□□ 1.55
DDX56-207ENST00000448192 EZH2Q15910 746 aaKnown RBP24.72■■□□□ 1.55
DDX56-207ENST00000448192 COG3Q96JB2 828 aa24.72■■□□□ 1.55
DDX56-207ENST00000448192 CDCA7Q9BWT1 371 aaPredicted RBP24.72■■□□□ 1.55
DDX56-207ENST00000448192 SRCAPQ6ZRS2 3230 aa24.72■■□□□ 1.55
DDX56-207ENST00000448192 PEAK1Q9H792 1746 aa24.71■■□□□ 1.55
DDX56-207ENST00000448192 OVOS2A0A0G2JMS6 1433 aa24.7■■□□□ 1.55
DDX56-207ENST00000448192 CCDC7Q96M83 1385 aa24.7■■□□□ 1.55
DDX56-207ENST00000448192 NLRP2Q9NX02 1062 aa24.7■■□□□ 1.54
DDX56-207ENST00000448192 SBF2Q86WG5 1849 aa24.7■■□□□ 1.54
DDX56-207ENST00000448192 ERBB3P21860 1342 aa24.69■■□□□ 1.54
DDX56-207ENST00000448192 PSDA5PKW4 1024 aaPredicted RBP24.68■■□□□ 1.54
DDX56-207ENST00000448192 C11orf95C9JLR9 678 aaPredicted RBP24.68■■□□□ 1.54
DDX56-207ENST00000448192 ANKRD24Q8TF21 1146 aa24.68■■□□□ 1.54
DDX56-207ENST00000448192 CAMKK2Q96RR4 588 aa24.68■■□□□ 1.54
DDX56-207ENST00000448192 MYOM1P52179 1685 aa24.66■■□□□ 1.54
DDX56-207ENST00000448192 KIF20BQ96Q89 1820 aa24.66■■□□□ 1.54
DDX56-207ENST00000448192 EXOC5O00471 708 aa24.65■■□□□ 1.54
DDX56-207ENST00000448192 MARCH10Q8NA82 808 aaPredicted RBP24.65■■□□□ 1.54
DDX56-207ENST00000448192 IP6K1Q92551 441 aa24.65■■□□□ 1.54
DDX56-207ENST00000448192 GGNBP2Q9H3C7 697 aa24.65■■□□□ 1.54
DDX56-207ENST00000448192 FYB1O15117 783 aa24.64■■□□□ 1.54
DDX56-207ENST00000448192 FBLN1P23142 703 aa24.64■■□□□ 1.54
DDX56-207ENST00000448192 PARD3Q8TEW0 1356 aa24.64■■□□□ 1.53
DDX56-207ENST00000448192 LTV1Q96GA3 475 aaPredicted RBP24.63■■□□□ 1.53
DDX56-207ENST00000448192 RREB1Q92766 1687 aa24.62■■□□□ 1.53
DDX56-207ENST00000448192 MAP3K19Q56UN5 1328 aa24.62■■□□□ 1.53
DDX56-207ENST00000448192 AMPHP49418 695 aa24.62■■□□□ 1.53
DDX56-207ENST00000448192 FAM208AQ9UK61 1670 aaKnown RBP24.62■■□□□ 1.53
DDX56-207ENST00000448192 R3HDM1Q15032 1099 aaKnown RBP24.61■■□□□ 1.53
DDX56-207ENST00000448192 POLR3GLQ9BT43 218 aa24.61■■□□□ 1.53
DDX56-207ENST00000448192 IL2RBP14784 551 aa24.6■■□□□ 1.53
DDX56-207ENST00000448192 NUP188Q5SRE5 1749 aa24.6■■□□□ 1.53
DDX56-207ENST00000448192 TNS2Q63HR2 1409 aa24.6■■□□□ 1.53
DDX56-207ENST00000448192 HOXC9P31274 260 aa24.59■■□□□ 1.53
DDX56-207ENST00000448192 EIF4G2P78344 907 aaKnown RBP eCLIP24.58■■□□□ 1.53
DDX56-207ENST00000448192 RRS1Q15050 365 aaKnown RBP24.58■■□□□ 1.53
DDX56-207ENST00000448192 BCL11BQ9C0K0 894 aaPredicted RBP24.58■■□□□ 1.53
DDX56-207ENST00000448192 RGPD2P0DJD1 1756 aa24.57■■□□□ 1.52
DDX56-207ENST00000448192 PTF1AQ7RTS3 328 aa24.57■■□□□ 1.52
DDX56-207ENST00000448192 CARD14Q9BXL6 1004 aa24.57■■□□□ 1.52
DDX56-207ENST00000448192 BCL9O00512 1426 aa24.56■■□□□ 1.52
DDX56-207ENST00000448192 NSD3Q9BZ95 1437 aa24.56■■□□□ 1.52
DDX56-207ENST00000448192 HSPA5P11021 654 aaKnown RBP24.55■■□□□ 1.52
DDX56-207ENST00000448192 RGPD3A6NKT7 1758 aaPredicted RBP24.54■■□□□ 1.52
DDX56-207ENST00000448192 RGPD4Q7Z3J3 1758 aa24.54■■□□□ 1.52
DDX56-207ENST00000448192 NBPF14Q5TI25 921 aa24.53■■□□□ 1.52
DDX56-207ENST00000448192 LRP5O75197 1615 aa24.53■■□□□ 1.52
DDX56-207ENST00000448192 RTL1A6NKG5 1358 aa24.53■■□□□ 1.52
DDX56-207ENST00000448192 PLSCR1O15162 318 aa24.52■■□□□ 1.52
DDX56-207ENST00000448192 KAT6BQ8WYB5 2073 aa24.51■■□□□ 1.51
DDX56-207ENST00000448192 NHSQ6T4R5 1651 aa24.5■■□□□ 1.51
DDX56-207ENST00000448192 KCNQ2O43526 872 aa24.49■■□□□ 1.51
DDX56-207ENST00000448192 ACSBG1Q96GR2 724 aa24.49■■□□□ 1.51
DDX56-207ENST00000448192 SMG6Q86US8 1419 aaKnown RBP24.47■■□□□ 1.51
DDX56-207ENST00000448192 CGNL1Q0VF96 1302 aa24.47■■□□□ 1.51
DDX56-207ENST00000448192 DDX54Q8TDD1 881 aaKnown RBP24.47■■□□□ 1.51
DDX56-207ENST00000448192 HSP90AB2PQ58FF8 381 aa24.46■■□□□ 1.51
DDX56-207ENST00000448192 FLT4P35916 1363 aa24.45■■□□□ 1.5
DDX56-207ENST00000448192 NBPF6Q5VWK0 638 aa24.45■■□□□ 1.5
DDX56-207ENST00000448192 NBPF4Q96M43 638 aa24.45■■□□□ 1.5
DDX56-207ENST00000448192 MAP2P11137 1827 aaKnown RBP24.45■■□□□ 1.5
DDX56-207ENST00000448192 USHBP1Q8N6Y0 703 aa24.44■■□□□ 1.5
DDX56-207ENST00000448192 INSRP06213 1382 aa24.43■■□□□ 1.5
DDX56-207ENST00000448192 BTAF1O14981 1849 aa24.43■■□□□ 1.5
DDX56-207ENST00000448192 PROM2Q8N271 834 aa24.43■■□□□ 1.5
DDX56-207ENST00000448192 EMILIN1Q9Y6C2 1016 aa24.43■■□□□ 1.5
DDX56-207ENST00000448192 KIF24Q5T7B8 1368 aa24.42■■□□□ 1.5
DDX56-207ENST00000448192 MEGF6O75095 1541 aa24.42■■□□□ 1.5
DDX56-207ENST00000448192 PPM1GO15355 546 aaPredicted RBP24.42■■□□□ 1.5
DDX56-207ENST00000448192 SHANK3Q9BYB0 1731 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms