RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 USP17L8P0C7I0 530 aa10.02□□□□□ -0.81
USP49-205ENST00000448078 GLI2P10070 1586 aa10.01□□□□□ -0.81
USP49-205ENST00000448078 KIF27Q86VH2 1401 aa10.01□□□□□ -0.81
USP49-205ENST00000448078 UACAQ9BZF9 1416 aa10.01□□□□□ -0.81
USP49-205ENST00000448078 EHBP1Q8NDI1 1231 aa10.01□□□□□ -0.81
USP49-205ENST00000448078 ARMC2Q8NEN0 867 aa10.01□□□□□ -0.81
USP49-205ENST00000448078 BAP1Q92560 729 aa10.01□□□□□ -0.81
USP49-205ENST00000448078 EMID1Q96A84 441 aaPredicted RBP10.01□□□□□ -0.81
USP49-205ENST00000448078 TTC24A2A3L6 582 aaPredicted RBP10□□□□□ -0.81
USP49-205ENST00000448078 CYP4X1Q8N118 509 aa10□□□□□ -0.81
USP49-205ENST00000448078 RUSC2Q8N2Y8 1516 aa9.99□□□□□ -0.81
USP49-205ENST00000448078 NBPF14Q5TI25 921 aa9.99□□□□□ -0.81
USP49-205ENST00000448078 FBXO31Q5XUX0 539 aaPredicted RBP9.99□□□□□ -0.81
USP49-205ENST00000448078 CARMIL1Q5VZK9 1371 aa9.99□□□□□ -0.81
USP49-205ENST00000448078 WNT7BP56706 349 aa9.98□□□□□ -0.81
USP49-205ENST00000448078 LAPTM4AQ15012 233 aa9.98□□□□□ -0.81
USP49-205ENST00000448078 NR6A1Q15406 480 aa9.98□□□□□ -0.81
USP49-205ENST00000448078 ARID4BQ4LE39 1312 aaPredicted RBP9.98□□□□□ -0.81
USP49-205ENST00000448078 UHRF1BP1LA0JNW5 1464 aa9.98□□□□□ -0.81
USP49-205ENST00000448078 LMTK3Q96Q04 1460 aa9.98□□□□□ -0.81
USP49-205ENST00000448078 BIVM-ERCC5R4GMW8 1640 aa9.97□□□□□ -0.81
USP49-205ENST00000448078 APBB1O00213 710 aa9.97□□□□□ -0.81
USP49-205ENST00000448078 F12P00748 615 aaPredicted RBP9.97□□□□□ -0.81
USP49-205ENST00000448078 RC3H1Q5TC82 1133 aaKnown RBP9.97□□□□□ -0.81
USP49-205ENST00000448078 Q6ZNB5 142 aa9.97□□□□□ -0.81
USP49-205ENST00000448078 EPRSP07814 1512 aaKnown RBP9.97□□□□□ -0.81
USP49-205ENST00000448078 MAGEB6P1A0A0J9YX57 407 aa9.96□□□□□ -0.82
USP49-205ENST00000448078 PKDCCQ504Y2 493 aa9.96□□□□□ -0.82
USP49-205ENST00000448078 ZNF511Q8NB15 262 aa9.96□□□□□ -0.82
USP49-205ENST00000448078 CD109Q6YHK3 1445 aa9.96□□□□□ -0.82
USP49-205ENST00000448078 COL17A1Q9UMD9 1497 aaPredicted RBP9.96□□□□□ -0.82
USP49-205ENST00000448078 SH3BP2P78314 561 aa9.95□□□□□ -0.82
USP49-205ENST00000448078 TMEM132AQ24JP5 1023 aa9.95□□□□□ -0.82
USP49-205ENST00000448078 MRGPRX2Q96LB1 330 aa9.95□□□□□ -0.82
USP49-205ENST00000448078 FAM187AA6NFU0 413 aa9.94□□□□□ -0.82
USP49-205ENST00000448078 WNT7AO00755 349 aa9.94□□□□□ -0.82
USP49-205ENST00000448078 NRG2O14511 850 aaPredicted RBP9.94□□□□□ -0.82
USP49-205ENST00000448078 SOCS7O14512 581 aa9.94□□□□□ -0.82
USP49-205ENST00000448078 CARD14Q9BXL6 1004 aa9.94□□□□□ -0.82
USP49-205ENST00000448078 PRM3Q9NNZ6 103 aa9.94□□□□□ -0.82
USP49-205ENST00000448078 PHLDB1Q86UU1 1377 aa9.93□□□□□ -0.82
USP49-205ENST00000448078 SKOR1P84550 965 aa9.93□□□□□ -0.82
USP49-205ENST00000448078 ARID5BQ14865 1188 aa9.93□□□□□ -0.82
USP49-205ENST00000448078 BPHLQ86WA6 291 aaPredicted RBP9.93□□□□□ -0.82
USP49-205ENST00000448078 HMX1Q9NP08 348 aaPredicted RBP9.92□□□□□ -0.82
USP49-205ENST00000448078 FKBPLQ9UIM3 349 aa9.92□□□□□ -0.82
USP49-205ENST00000448078 ALDH1A1P00352 501 aa9.91□□□□□ -0.82
USP49-205ENST00000448078 BANK1Q8NDB2 785 aa9.91□□□□□ -0.82
USP49-205ENST00000448078 FAM174AQ8TBP5 190 aa9.91□□□□□ -0.82
USP49-205ENST00000448078 FOXJ1Q92949 421 aa9.91□□□□□ -0.82
USP49-205ENST00000448078 PKD2L1Q9P0L9 805 aa9.91□□□□□ -0.82
USP49-205ENST00000448078 WASF2Q9Y6W5 498 aa9.91□□□□□ -0.82
USP49-205ENST00000448078 KDM5BQ9UGL1 1544 aa9.91□□□□□ -0.82
USP49-205ENST00000448078 DISP3Q9P2K9 1392 aa9.9□□□□□ -0.82
USP49-205ENST00000448078 GDF9O60383 454 aa9.9□□□□□ -0.82
USP49-205ENST00000448078 PRR20EP86478 221 aa9.9□□□□□ -0.82
USP49-205ENST00000448078 PRR20CP86479 221 aa9.9□□□□□ -0.82
USP49-205ENST00000448078 PRR20DP86480 221 aa9.9□□□□□ -0.82
USP49-205ENST00000448078 PRR20BP86481 221 aa9.9□□□□□ -0.82
USP49-205ENST00000448078 PRR20AP86496 221 aa9.9□□□□□ -0.82
USP49-205ENST00000448078 ZBTB33Q86T24 672 aa9.9□□□□□ -0.82
USP49-205ENST00000448078 SNIP1Q8TAD8 396 aaKnown RBP9.9□□□□□ -0.82
USP49-205ENST00000448078 ARHGAP9Q9BRR9 750 aa9.9□□□□□ -0.82
USP49-205ENST00000448078 VARSP26640 1264 aaKnown RBP9.89□□□□□ -0.83
USP49-205ENST00000448078 EPS8L1Q8TE68 723 aa9.89□□□□□ -0.83
USP49-205ENST00000448078 GPKOWQ92917 476 aaPredicted RBP eCLIP9.89□□□□□ -0.83
USP49-205ENST00000448078 WDR7Q9Y4E6 1490 aa9.89□□□□□ -0.83
USP49-205ENST00000448078 CUL7Q14999 1698 aa9.89□□□□□ -0.83
USP49-205ENST00000448078 PTK2Q05397 1052 aa9.88□□□□□ -0.83
USP49-205ENST00000448078 TRIM67Q6ZTA4 783 aa9.88□□□□□ -0.83
USP49-205ENST00000448078 SNRKQ9NRH2 765 aa9.88□□□□□ -0.83
USP49-205ENST00000448078 MAGI3Q5TCQ9 1506 aa9.87□□□□□ -0.83
USP49-205ENST00000448078 TLL2Q9Y6L7 1015 aa9.87□□□□□ -0.83
USP49-205ENST00000448078 MAP3K4Q9Y6R4 1608 aa9.86□□□□□ -0.83
USP49-205ENST00000448078 IQGAP2Q13576 1575 aa9.86□□□□□ -0.83
USP49-205ENST00000448078 NDUFB9Q9Y6M9 179 aa9.86□□□□□ -0.83
USP49-205ENST00000448078 PPRC1Q5VV67 1664 aaKnown RBP9.86□□□□□ -0.83
USP49-205ENST00000448078 PTPRMP28827 1452 aa9.85□□□□□ -0.83
USP49-205ENST00000448078 ZC3H4Q9UPT8 1303 aaKnown RBP9.85□□□□□ -0.83
USP49-205ENST00000448078 RAPGEF3O95398 923 aa9.84□□□□□ -0.83
USP49-205ENST00000448078 PDXDC2PQ6P474 469 aa9.84□□□□□ -0.83
USP49-205ENST00000448078 SLC10A4Q96EP9 437 aa9.84□□□□□ -0.83
USP49-205ENST00000448078 J3QL48 77 aa9.83□□□□□ -0.84
USP49-205ENST00000448078 DGAT1O75907 488 aa9.83□□□□□ -0.84
USP49-205ENST00000448078 MTMR14Q8NCE2 650 aa9.83□□□□□ -0.84
USP49-205ENST00000448078 GOLGA3Q08378 1498 aa9.83□□□□□ -0.84
USP49-205ENST00000448078 POGZQ7Z3K3 1410 aa9.82□□□□□ -0.84
USP49-205ENST00000448078 HSPA2P54652 639 aa9.82□□□□□ -0.84
USP49-205ENST00000448078 VASH1Q7L8A9 365 aaPredicted RBP9.82□□□□□ -0.84
USP49-205ENST00000448078 TRIM34Q9BYJ4 488 aa9.82□□□□□ -0.84
USP49-205ENST00000448078 TOR4AQ9NXH8 423 aa9.82□□□□□ -0.84
USP49-205ENST00000448078 ARAP3Q8WWN8 1544 aa9.82□□□□□ -0.84
USP49-205ENST00000448078 DISP1Q96F81 1524 aa9.82□□□□□ -0.84
USP49-205ENST00000448078 DZIP3Q86Y13 1208 aaKnown RBP9.81□□□□□ -0.84
USP49-205ENST00000448078 ZNF330Q9Y3S2 320 aaPredicted RBP9.81□□□□□ -0.84
USP49-205ENST00000448078 RAPGEF2Q9Y4G8 1499 aa9.8□□□□□ -0.84
USP49-205ENST00000448078 RAD21O60216 631 aa9.8□□□□□ -0.84
USP49-205ENST00000448078 ABL2P42684 1182 aa9.8□□□□□ -0.84
USP49-205ENST00000448078 SH3BP5LQ7L8J4 393 aa9.8□□□□□ -0.84
USP49-205ENST00000448078 ZCCHC11Q5TAX3 1644 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms