RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 CDCA7Q9BWT1 371 aaPredicted RBP21.91■■□□□ 1.1
HMGB2-203ENST00000446922 ABCC6O95255 1503 aa21.9■■□□□ 1.1
HMGB2-203ENST00000446922 ZBTB7CA1YPR0 619 aa21.9■■□□□ 1.1
HMGB2-203ENST00000446922 FAM182BQ5T319 152 aa21.9■■□□□ 1.1
HMGB2-203ENST00000446922 AXIN2Q9Y2T1 843 aa21.9■■□□□ 1.1
HMGB2-203ENST00000446922 USP54Q70EL1 1684 aa21.89■■□□□ 1.1
HMGB2-203ENST00000446922 TOM1L2Q6ZVM7 507 aa21.89■■□□□ 1.09
HMGB2-203ENST00000446922 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.88■■□□□ 1.09
HMGB2-203ENST00000446922 NFAT5O94916 1531 aa21.88■■□□□ 1.09
HMGB2-203ENST00000446922 PARP4Q9UKK3 1724 aaKnown RBP21.87■■□□□ 1.09
HMGB2-203ENST00000446922 CARD10Q9BWT7 1032 aa21.87■■□□□ 1.09
HMGB2-203ENST00000446922 PARD3Q8TEW0 1356 aa21.86■■□□□ 1.09
HMGB2-203ENST00000446922 SRCAPQ6ZRS2 3230 aa21.85■■□□□ 1.09
HMGB2-203ENST00000446922 TRIM37O94972 964 aa21.85■■□□□ 1.09
HMGB2-203ENST00000446922 TMF1P82094 1093 aa21.85■■□□□ 1.09
HMGB2-203ENST00000446922 EN1Q05925 392 aaPredicted RBP21.85■■□□□ 1.09
HMGB2-203ENST00000446922 A0A1W2PP64 1363 aa21.85■■□□□ 1.09
HMGB2-203ENST00000446922 CDCA8Q53HL2 280 aa21.84■■□□□ 1.09
HMGB2-203ENST00000446922 NME9Q86XW9 330 aa21.84■■□□□ 1.09
HMGB2-203ENST00000446922 DDB1Q16531 1140 aa21.83■■□□□ 1.09
HMGB2-203ENST00000446922 SOX12O15370 315 aa21.82■■□□□ 1.08
HMGB2-203ENST00000446922 CAMKK2Q96RR4 588 aa21.82■■□□□ 1.08
HMGB2-203ENST00000446922 TNS1Q9HBL0 1735 aaKnown RBP21.82■■□□□ 1.08
HMGB2-203ENST00000446922 USP47Q96K76 1375 aa21.82■■□□□ 1.08
HMGB2-203ENST00000446922 CCDC7Q96M83 1385 aa21.82■■□□□ 1.08
HMGB2-203ENST00000446922 APBA3O96018 575 aa21.81■■□□□ 1.08
HMGB2-203ENST00000446922 CSB-PGBD3P0DP91 1061 aa21.81■■□□□ 1.08
HMGB2-203ENST00000446922 OVOS2A0A0G2JMS6 1433 aa21.8■■□□□ 1.08
HMGB2-203ENST00000446922 OVOS2A0A0J9YW53 1432 aa21.8■■□□□ 1.08
HMGB2-203ENST00000446922 OVOS2Q6IE36 1432 aa21.8■■□□□ 1.08
HMGB2-203ENST00000446922 ANKRD36BQ8N2N9 1353 aa21.79■■□□□ 1.08
HMGB2-203ENST00000446922 BCL9O00512 1426 aa21.79■■□□□ 1.08
HMGB2-203ENST00000446922 RGPD5Q99666 1765 aa21.77■■□□□ 1.08
HMGB2-203ENST00000446922 EXOC5O00471 708 aa21.77■■□□□ 1.08
HMGB2-203ENST00000446922 EZH2Q15910 746 aaKnown RBP21.77■■□□□ 1.08
HMGB2-203ENST00000446922 PCGF6Q9BYE7 350 aa21.77■■□□□ 1.08
HMGB2-203ENST00000446922 ERBB3P21860 1342 aa21.77■■□□□ 1.07
HMGB2-203ENST00000446922 COG3Q96JB2 828 aa21.76■■□□□ 1.07
HMGB2-203ENST00000446922 LRRC37A3O60309 1634 aa21.74■■□□□ 1.07
HMGB2-203ENST00000446922 PLSCR1O15162 318 aa21.74■■□□□ 1.07
HMGB2-203ENST00000446922 IP6K1Q92551 441 aa21.74■■□□□ 1.07
HMGB2-203ENST00000446922 PEAK1Q9H792 1746 aa21.74■■□□□ 1.07
HMGB2-203ENST00000446922 WNK3Q9BYP7 1800 aa21.73■■□□□ 1.07
HMGB2-203ENST00000446922 BCL11BQ9C0K0 894 aaPredicted RBP21.73■■□□□ 1.07
HMGB2-203ENST00000446922 MARCH10Q8NA82 808 aaPredicted RBP21.72■■□□□ 1.07
HMGB2-203ENST00000446922 ANKRD24Q8TF21 1146 aa21.72■■□□□ 1.07
HMGB2-203ENST00000446922 LTN1O94822 1766 aa21.71■■□□□ 1.07
HMGB2-203ENST00000446922 NBPF14Q5TI25 921 aa21.71■■□□□ 1.07
HMGB2-203ENST00000446922 NLRP2Q9NX02 1062 aa21.71■■□□□ 1.07
HMGB2-203ENST00000446922 FYB1O15117 783 aa21.69■■□□□ 1.06
HMGB2-203ENST00000446922 IL2RBP14784 551 aa21.69■■□□□ 1.06
HMGB2-203ENST00000446922 PSDA5PKW4 1024 aaPredicted RBP21.68■■□□□ 1.06
HMGB2-203ENST00000446922 R3HDM1Q15032 1099 aaKnown RBP21.68■■□□□ 1.06
HMGB2-203ENST00000446922 LRP5O75197 1615 aa21.68■■□□□ 1.06
HMGB2-203ENST00000446922 SBF2Q86WG5 1849 aa21.67■■□□□ 1.06
HMGB2-203ENST00000446922 RREB1Q92766 1687 aa21.67■■□□□ 1.06
HMGB2-203ENST00000446922 TNS2Q63HR2 1409 aa21.67■■□□□ 1.06
HMGB2-203ENST00000446922 RGPD3A6NKT7 1758 aaPredicted RBP21.66■■□□□ 1.06
HMGB2-203ENST00000446922 RGPD4Q7Z3J3 1758 aa21.66■■□□□ 1.06
HMGB2-203ENST00000446922 MAP3K19Q56UN5 1328 aa21.65■■□□□ 1.06
HMGB2-203ENST00000446922 HOXC9P31274 260 aa21.65■■□□□ 1.06
HMGB2-203ENST00000446922 AMPHP49418 695 aa21.65■■□□□ 1.06
HMGB2-203ENST00000446922 RTL1A6NKG5 1358 aa21.64■■□□□ 1.06
HMGB2-203ENST00000446922 FAM208AQ9UK61 1670 aaKnown RBP21.64■■□□□ 1.05
HMGB2-203ENST00000446922 CCER1Q8TC90 406 aaPredicted RBP21.63■■□□□ 1.05
HMGB2-203ENST00000446922 KIF24Q5T7B8 1368 aa21.62■■□□□ 1.05
HMGB2-203ENST00000446922 GGNBP2Q9H3C7 697 aa21.61■■□□□ 1.05
HMGB2-203ENST00000446922 NUP188Q5SRE5 1749 aa21.6■■□□□ 1.05
HMGB2-203ENST00000446922 EIF4G2P78344 907 aaKnown RBP eCLIP21.6■■□□□ 1.052e-52■□□□□ 9.1
HMGB2-203ENST00000446922 CARD14Q9BXL6 1004 aa21.59■■□□□ 1.05
HMGB2-203ENST00000446922 PTF1AQ7RTS3 328 aa21.57■■□□□ 1.04
HMGB2-203ENST00000446922 LTV1Q96GA3 475 aaPredicted RBP21.57■■□□□ 1.04
HMGB2-203ENST00000446922 CGNL1Q0VF96 1302 aa21.56■■□□□ 1.04
HMGB2-203ENST00000446922 FBLN1P23142 703 aa21.56■■□□□ 1.04
HMGB2-203ENST00000446922 PROM2Q8N271 834 aa21.56■■□□□ 1.04
HMGB2-203ENST00000446922 RRS1Q15050 365 aaKnown RBP21.55■■□□□ 1.04
HMGB2-203ENST00000446922 INSRP06213 1382 aa21.55■■□□□ 1.04
HMGB2-203ENST00000446922 MYOM1P52179 1685 aa21.55■■□□□ 1.04
HMGB2-203ENST00000446922 SMG6Q86US8 1419 aaKnown RBP21.55■■□□□ 1.04
HMGB2-203ENST00000446922 KIF20BQ96Q89 1820 aa21.54■■□□□ 1.04
HMGB2-203ENST00000446922 NSD3Q9BZ95 1437 aa21.54■■□□□ 1.04
HMGB2-203ENST00000446922 NHSQ6T4R5 1651 aa21.53■■□□□ 1.04
HMGB2-203ENST00000446922 FLT4P35916 1363 aa21.53■■□□□ 1.04
HMGB2-203ENST00000446922 KCNQ2O43526 872 aa21.53■■□□□ 1.04
HMGB2-203ENST00000446922 TXNRD1Q16881 649 aa21.53■■□□□ 1.04
HMGB2-203ENST00000446922 ZCRB1Q8TBF4 217 aaKnown RBP21.52■■□□□ 1.04
HMGB2-203ENST00000446922 HSPA5P11021 654 aaKnown RBP21.51■■□□□ 1.03
HMGB2-203ENST00000446922 NBPF6Q5VWK0 638 aa21.51■■□□□ 1.03
HMGB2-203ENST00000446922 NBPF4Q96M43 638 aa21.51■■□□□ 1.03
HMGB2-203ENST00000446922 DDX54Q8TDD1 881 aaKnown RBP21.5■■□□□ 1.03
HMGB2-203ENST00000446922 SPON1Q9HCB6 807 aa21.5■■□□□ 1.03
HMGB2-203ENST00000446922 HSP90AB2PQ58FF8 381 aa21.49■■□□□ 1.03
HMGB2-203ENST00000446922 ACSBG1Q96GR2 724 aa21.49■■□□□ 1.03
HMGB2-203ENST00000446922 RAPGEF4Q8WZA2 1011 aa21.48■■□□□ 1.03
HMGB2-203ENST00000446922 STK32BQ9NY57 414 aa21.47■■□□□ 1.03
HMGB2-203ENST00000446922 SLC15A2Q16348 729 aa21.46■■□□□ 1.03
HMGB2-203ENST00000446922 ANO8Q9HCE9 1232 aaPredicted RBP21.46■■□□□ 1.03
HMGB2-203ENST00000446922 WASHC2AQ641Q2 1341 aa21.46■■□□□ 1.03
HMGB2-203ENST00000446922 TATP17735 454 aaPredicted RBP21.45■■□□□ 1.02
HMGB2-203ENST00000446922 SLC27A3Q5K4L6 730 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms