RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 CARD14Q9BXL6 1004 aa20.6■□□□□ 0.89
HDAC4-204ENST00000446876 AXIN2Q9Y2T1 843 aa20.6■□□□□ 0.89
HDAC4-204ENST00000446876 SPATA31A1Q5TZJ5 1347 aa20.59■□□□□ 0.89
HDAC4-204ENST00000446876 THSD7AQ9UPZ6 1657 aa20.59■□□□□ 0.89
HDAC4-204ENST00000446876 A0A0G2JS52 829 aa20.59■□□□□ 0.89
HDAC4-204ENST00000446876 MYT1Q01538 1121 aa20.59■□□□□ 0.89
HDAC4-204ENST00000446876 USP35Q9P2H5 1018 aa20.59■□□□□ 0.89
HDAC4-204ENST00000446876 GGNBP2Q9H3C7 697 aa20.58■□□□□ 0.89
HDAC4-204ENST00000446876 FYB1O15117 783 aa20.57■□□□□ 0.88
HDAC4-204ENST00000446876 COG3Q96JB2 828 aa20.57■□□□□ 0.88
HDAC4-204ENST00000446876 ONECUT3O60422 494 aaPredicted RBP20.56■□□□□ 0.88
HDAC4-204ENST00000446876 UPF1Q92900 1129 aaKnown RBP eCLIP20.56■□□□□ 0.88
HDAC4-204ENST00000446876 ABCC6O95255 1503 aa20.55■□□□□ 0.88
HDAC4-204ENST00000446876 FBLN1P23142 703 aa20.55■□□□□ 0.88
HDAC4-204ENST00000446876 KIF7Q2M1P5 1343 aa20.53■□□□□ 0.88
HDAC4-204ENST00000446876 CRB1P82279 1406 aa20.53■□□□□ 0.88
HDAC4-204ENST00000446876 WNK3Q9BYP7 1800 aa20.53■□□□□ 0.88
HDAC4-204ENST00000446876 TOM1L2Q6ZVM7 507 aa20.51■□□□□ 0.87
HDAC4-204ENST00000446876 TCP11L2Q8N4U5 519 aa20.51■□□□□ 0.87
HDAC4-204ENST00000446876 PANK3Q9H999 370 aa20.51■□□□□ 0.87
HDAC4-204ENST00000446876 WDR17Q8IZU2 1322 aa20.51■□□□□ 0.87
HDAC4-204ENST00000446876 ANKRD26Q9UPS8 1709 aa20.5■□□□□ 0.87
HDAC4-204ENST00000446876 CSB-PGBD3P0DP91 1061 aa20.5■□□□□ 0.87
HDAC4-204ENST00000446876 KRT27Q7Z3Y8 459 aa20.5■□□□□ 0.87
HDAC4-204ENST00000446876 MAP3K19Q56UN5 1328 aa20.5■□□□□ 0.87
HDAC4-204ENST00000446876 PARP4Q9UKK3 1724 aaKnown RBP20.48■□□□□ 0.87
HDAC4-204ENST00000446876 RRS1Q15050 365 aaKnown RBP20.48■□□□□ 0.87
HDAC4-204ENST00000446876 BARGINQ6ZT62 677 aa20.48■□□□□ 0.87
HDAC4-204ENST00000446876 EP400Q96L91 3159 aa20.48■□□□□ 0.87
HDAC4-204ENST00000446876 PEAK1Q9H792 1746 aa20.47■□□□□ 0.87
HDAC4-204ENST00000446876 LRRC37A3O60309 1634 aa20.47■□□□□ 0.87
HDAC4-204ENST00000446876 FAM182BQ5T319 152 aa20.47■□□□□ 0.87
HDAC4-204ENST00000446876 ERBB3P21860 1342 aa20.47■□□□□ 0.87
HDAC4-204ENST00000446876 CGNL1Q0VF96 1302 aa20.47■□□□□ 0.87
HDAC4-204ENST00000446876 ANKRD24Q8TF21 1146 aa20.46■□□□□ 0.87
HDAC4-204ENST00000446876 RGPD2P0DJD1 1756 aa20.46■□□□□ 0.87
HDAC4-204ENST00000446876 IP6K1Q92551 441 aa20.45■□□□□ 0.86
HDAC4-204ENST00000446876 THRAP3Q9Y2W1 955 aaKnown RBP20.45■□□□□ 0.86
HDAC4-204ENST00000446876 BLMP54132 1417 aaPredicted RBP20.44■□□□□ 0.86
HDAC4-204ENST00000446876 HOXC9P31274 260 aa20.44■□□□□ 0.86
HDAC4-204ENST00000446876 AMPHP49418 695 aa20.44■□□□□ 0.86
HDAC4-204ENST00000446876 LTV1Q96GA3 475 aaPredicted RBP20.44■□□□□ 0.86
HDAC4-204ENST00000446876 CCDC7Q96M83 1385 aa20.44■□□□□ 0.86
HDAC4-204ENST00000446876 FAM208AQ9UK61 1670 aaKnown RBP20.43■□□□□ 0.86
HDAC4-204ENST00000446876 CARD10Q9BWT7 1032 aa20.43■□□□□ 0.86
HDAC4-204ENST00000446876 WASHC2AQ641Q2 1341 aa20.43■□□□□ 0.86
HDAC4-204ENST00000446876 MAP2P11137 1827 aaKnown RBP20.43■□□□□ 0.86
HDAC4-204ENST00000446876 NLRP2Q9NX02 1062 aa20.42■□□□□ 0.86
HDAC4-204ENST00000446876 RTL1A6NKG5 1358 aa20.41■□□□□ 0.86
HDAC4-204ENST00000446876 DISP2A7MBM2 1401 aa20.41■□□□□ 0.86
HDAC4-204ENST00000446876 EMILIN1Q9Y6C2 1016 aa20.4■□□□□ 0.86
HDAC4-204ENST00000446876 TNNT2P45379 298 aaPredicted RBP20.39■□□□□ 0.85
HDAC4-204ENST00000446876 PDE3BQ13370 1112 aa20.38■□□□□ 0.85
HDAC4-204ENST00000446876 RGPD1P0DJD0 1748 aa20.37■□□□□ 0.85
HDAC4-204ENST00000446876 TNS1Q9HBL0 1735 aaKnown RBP20.37■□□□□ 0.85
HDAC4-204ENST00000446876 FLT4P35916 1363 aa20.36■□□□□ 0.85
HDAC4-204ENST00000446876 HSP90AB2PQ58FF8 381 aa20.36■□□□□ 0.85
HDAC4-204ENST00000446876 KNSTRNQ9Y448 316 aa20.36■□□□□ 0.85
HDAC4-204ENST00000446876 NSD2O96028 1365 aa20.35■□□□□ 0.85
HDAC4-204ENST00000446876 PPM1GO15355 546 aaPredicted RBP20.35■□□□□ 0.85
HDAC4-204ENST00000446876 DDB1Q16531 1140 aa20.35■□□□□ 0.85
HDAC4-204ENST00000446876 INSRP06213 1382 aa20.34■□□□□ 0.85
HDAC4-204ENST00000446876 AMER1Q5JTC6 1135 aaPredicted RBP20.33■□□□□ 0.85
HDAC4-204ENST00000446876 CDCA7Q9BWT1 371 aaPredicted RBP20.33■□□□□ 0.85
HDAC4-204ENST00000446876 TNS2Q63HR2 1409 aa20.33■□□□□ 0.84
HDAC4-204ENST00000446876 KIF24Q5T7B8 1368 aa20.33■□□□□ 0.84
HDAC4-204ENST00000446876 DEFB132Q7Z7B7 95 aa20.32■□□□□ 0.84
HDAC4-204ENST00000446876 CCDC125Q86Z20 511 aa20.32■□□□□ 0.84
HDAC4-204ENST00000446876 USHBP1Q8N6Y0 703 aa20.32■□□□□ 0.84
HDAC4-204ENST00000446876 POLKQ9UBT6 870 aa20.32■□□□□ 0.84
HDAC4-204ENST00000446876 SMG6Q86US8 1419 aaKnown RBP20.32■□□□□ 0.84
HDAC4-204ENST00000446876 SBF2Q86WG5 1849 aa20.32■□□□□ 0.84
HDAC4-204ENST00000446876 PER1O15534 1290 aaPredicted RBP20.31■□□□□ 0.84
HDAC4-204ENST00000446876 IL2RBP14784 551 aa20.31■□□□□ 0.84
HDAC4-204ENST00000446876 NBPF6Q5VWK0 638 aa20.31■□□□□ 0.84
HDAC4-204ENST00000446876 FAM196AQ6ZSG2 479 aa20.31■□□□□ 0.84
HDAC4-204ENST00000446876 MORC1Q86VD1 984 aa20.31■□□□□ 0.84
HDAC4-204ENST00000446876 NBPF4Q96M43 638 aa20.31■□□□□ 0.84
HDAC4-204ENST00000446876 OVOS2A0A0G2JMS6 1433 aa20.3■□□□□ 0.84
HDAC4-204ENST00000446876 TRIM37O94972 964 aa20.3■□□□□ 0.84
HDAC4-204ENST00000446876 SF3B2Q13435 895 aaKnown RBP20.3■□□□□ 0.84
HDAC4-204ENST00000446876 MARCH10Q8NA82 808 aaPredicted RBP20.3■□□□□ 0.84
HDAC4-204ENST00000446876 MEGF6O75095 1541 aa20.28■□□□□ 0.84
HDAC4-204ENST00000446876 SHANK3Q9BYB0 1731 aa20.28■□□□□ 0.84
HDAC4-204ENST00000446876 EXOC5O00471 708 aa20.28■□□□□ 0.84
HDAC4-204ENST00000446876 CNGB1Q14028 1251 aaPredicted RBP20.28■□□□□ 0.84
HDAC4-204ENST00000446876 CC2D1BQ5T0F9 858 aaKnown RBP20.28■□□□□ 0.84
HDAC4-204ENST00000446876 BAG6P46379 1132 aa20.23■□□□□ 0.83
HDAC4-204ENST00000446876 EN1Q05925 392 aaPredicted RBP20.23■□□□□ 0.83
HDAC4-204ENST00000446876 PTF1AQ7RTS3 328 aa20.23■□□□□ 0.83
HDAC4-204ENST00000446876 EIF4A2Q14240 407 aaKnown RBP20.22■□□□□ 0.83
HDAC4-204ENST00000446876 APBA3O96018 575 aa20.21■□□□□ 0.83
HDAC4-204ENST00000446876 KAT6BQ8WYB5 2073 aa20.2■□□□□ 0.82
HDAC4-204ENST00000446876 BCL9O00512 1426 aa20.2■□□□□ 0.82
HDAC4-204ENST00000446876 NCAPD2Q15021 1401 aa20.2■□□□□ 0.82
HDAC4-204ENST00000446876 NHSQ6T4R5 1651 aa20.2■□□□□ 0.82
HDAC4-204ENST00000446876 DDX54Q8TDD1 881 aaKnown RBP20.2■□□□□ 0.82
HDAC4-204ENST00000446876 EYA1Q99502 592 aa20.2■□□□□ 0.82
HDAC4-204ENST00000446876 NPC1L1Q9UHC9 1359 aa20.2■□□□□ 0.82
HDAC4-204ENST00000446876 RAPGEF4Q8WZA2 1011 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms