RNA–Protein interactions for RNA: ENST00000446593.1

LINC01880-201, Transcript of long intergenic non-protein coding RNA 1880, humanhuman

TSL 4 BASIC

Gene LINC01880, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01880-201ENST00000446593 RGPD1P0DJD0 1748 aa8.63□□□□□ -1.03
LINC01880-201ENST00000446593 PLCH1Q4KWH8 1693 aa8.62□□□□□ -1.03
LINC01880-201ENST00000446593 KIAA0232Q92628 1395 aa8.62□□□□□ -1.03
LINC01880-201ENST00000446593 WASLO00401 505 aaPredicted RBP8.62□□□□□ -1.03
LINC01880-201ENST00000446593 PLSCR1O15162 318 aa8.62□□□□□ -1.03
LINC01880-201ENST00000446593 IFFO2Q5TF58 517 aa8.62□□□□□ -1.03
LINC01880-201ENST00000446593 MPHOSPH9Q99550 1183 aa8.62□□□□□ -1.03
LINC01880-201ENST00000446593 FMN2Q9NZ56 1722 aa8.62□□□□□ -1.03
LINC01880-201ENST00000446593 COL14A1Q05707 1796 aaKnown RBP8.61□□□□□ -1.03
LINC01880-201ENST00000446593 MINK1Q8N4C8 1332 aaPredicted RBP8.61□□□□□ -1.03
LINC01880-201ENST00000446593 C1QTNF8P60827 252 aa8.61□□□□□ -1.03
LINC01880-201ENST00000446593 TRAK1Q9UPV9 953 aa8.61□□□□□ -1.03
LINC01880-201ENST00000446593 PPLO60437 1756 aa8.61□□□□□ -1.03
LINC01880-201ENST00000446593 ATMINO43313 823 aaPredicted RBP8.6□□□□□ -1.03
LINC01880-201ENST00000446593 LARP1Q6PKG0 1096 aaKnown RBP8.6□□□□□ -1.03
LINC01880-201ENST00000446593 BCL11BQ9C0K0 894 aaPredicted RBP8.6□□□□□ -1.03
LINC01880-201ENST00000446593 PRR36Q9H6K5 1346 aa8.59□□□□□ -1.03
LINC01880-201ENST00000446593 NUTM2GQ5VZR2 741 aa8.59□□□□□ -1.03
LINC01880-201ENST00000446593 THSD7AQ9UPZ6 1657 aa8.59□□□□□ -1.03
LINC01880-201ENST00000446593 SSH2Q76I76 1423 aa8.58□□□□□ -1.04
LINC01880-201ENST00000446593 ZBTB7AO95365 584 aa8.58□□□□□ -1.04
LINC01880-201ENST00000446593 ABTB2Q8N961 1025 aa8.58□□□□□ -1.04
LINC01880-201ENST00000446593 NUDT16Q96DE0 195 aaKnown RBP8.58□□□□□ -1.04
LINC01880-201ENST00000446593 SYT17Q9BSW7 474 aa8.58□□□□□ -1.04
LINC01880-201ENST00000446593 NRAPQ86VF7 1730 aa8.57□□□□□ -1.04
LINC01880-201ENST00000446593 DDB1Q16531 1140 aa8.57□□□□□ -1.04
LINC01880-201ENST00000446593 NLRP13Q86W25 1043 aa8.57□□□□□ -1.04
LINC01880-201ENST00000446593 FHDC1Q9C0D6 1143 aaPredicted RBP8.57□□□□□ -1.04
LINC01880-201ENST00000446593 STK32BQ9NY57 414 aa8.57□□□□□ -1.04
LINC01880-201ENST00000446593 KNDC1Q76NI1 1749 aa8.57□□□□□ -1.04
LINC01880-201ENST00000446593 DLC1Q96QB1 1528 aa8.56□□□□□ -1.04
LINC01880-201ENST00000446593 GCP02774 474 aa8.56□□□□□ -1.04
LINC01880-201ENST00000446593 PTGER2P43116 358 aa8.56□□□□□ -1.04
LINC01880-201ENST00000446593 SPNS2Q8IVW8 549 aa8.56□□□□□ -1.04
LINC01880-201ENST00000446593 STAC3Q96MF2 364 aa8.56□□□□□ -1.04
LINC01880-201ENST00000446593 CREBZFQ9NS37 354 aa8.56□□□□□ -1.04
LINC01880-201ENST00000446593 CCDC61Q9Y6R9 512 aa8.56□□□□□ -1.04
LINC01880-201ENST00000446593 OVOS2A0A0G2JMS6 1433 aa8.55□□□□□ -1.04
LINC01880-201ENST00000446593 OVOS2A0A0J9YW53 1432 aa8.55□□□□□ -1.04
LINC01880-201ENST00000446593 OVOS2Q6IE36 1432 aa8.55□□□□□ -1.04
LINC01880-201ENST00000446593 TNS1Q9HBL0 1735 aaKnown RBP8.55□□□□□ -1.04
LINC01880-201ENST00000446593 CDCA7Q9BWT1 371 aaPredicted RBP8.55□□□□□ -1.04
LINC01880-201ENST00000446593 CDK19Q9BWU1 502 aa8.55□□□□□ -1.04
LINC01880-201ENST00000446593 PDGFDQ9GZP0 370 aaPredicted RBP8.55□□□□□ -1.04
LINC01880-201ENST00000446593 MTFR1LQ9H019 292 aa8.55□□□□□ -1.04
LINC01880-201ENST00000446593 ANO8Q9HCE9 1232 aaPredicted RBP8.55□□□□□ -1.04
LINC01880-201ENST00000446593 CPDO75976 1380 aa8.55□□□□□ -1.04
LINC01880-201ENST00000446593 ACEP12821 1306 aa8.54□□□□□ -1.04
LINC01880-201ENST00000446593 TULP4Q9NRJ4 1543 aa8.54□□□□□ -1.04
LINC01880-201ENST00000446593 ABCA3Q99758 1704 aa8.54□□□□□ -1.04
LINC01880-201ENST00000446593 ATP7BP35670 1465 aa8.54□□□□□ -1.04
LINC01880-201ENST00000446593 PLEKHG3A1L390 1219 aa8.54□□□□□ -1.04
LINC01880-201ENST00000446593 GIGYF1O75420 1035 aaPredicted RBP8.54□□□□□ -1.04
LINC01880-201ENST00000446593 SLC15A2Q16348 729 aa8.54□□□□□ -1.04
LINC01880-201ENST00000446593 TOM1L2Q6ZVM7 507 aa8.54□□□□□ -1.04
LINC01880-201ENST00000446593 PROM2Q8N271 834 aa8.54□□□□□ -1.04
LINC01880-201ENST00000446593 KDM2AQ9Y2K7 1162 aa8.54□□□□□ -1.04
LINC01880-201ENST00000446593 ZBTB7CA1YPR0 619 aa8.53□□□□□ -1.04
LINC01880-201ENST00000446593 GPR162Q16538 588 aa8.53□□□□□ -1.04
LINC01880-201ENST00000446593 TXNRD1Q16881 649 aa8.53□□□□□ -1.04
LINC01880-201ENST00000446593 DCAF11Q8TEB1 546 aa8.53□□□□□ -1.04
LINC01880-201ENST00000446593 ARXQ96QS3 562 aa8.53□□□□□ -1.04
LINC01880-201ENST00000446593 IFT172Q9UG01 1749 aa8.53□□□□□ -1.04
LINC01880-201ENST00000446593 CRB1P82279 1406 aa8.53□□□□□ -1.04
LINC01880-201ENST00000446593 ALS2Q96Q42 1657 aa8.53□□□□□ -1.04
LINC01880-201ENST00000446593 TRPM3Q9HCF6 1732 aaPredicted RBP8.52□□□□□ -1.05
LINC01880-201ENST00000446593 POLR3AO14802 1390 aaPredicted RBP8.52□□□□□ -1.05
LINC01880-201ENST00000446593 EXOC5O00471 708 aa8.52□□□□□ -1.05
LINC01880-201ENST00000446593 CAMTA1Q9Y6Y1 1673 aa8.52□□□□□ -1.05
LINC01880-201ENST00000446593 USP19O94966 1318 aa8.52□□□□□ -1.05
LINC01880-201ENST00000446593 RGPD8O14715 1765 aaPredicted RBP8.51□□□□□ -1.05
LINC01880-201ENST00000446593 PTF1AQ7RTS3 328 aa8.51□□□□□ -1.05
LINC01880-201ENST00000446593 UTRNP46939 3433 aa8.51□□□□□ -1.05
LINC01880-201ENST00000446593 RREB1Q92766 1687 aa8.5□□□□□ -1.05
LINC01880-201ENST00000446593 NLRP6P59044 892 aa8.5□□□□□ -1.05
LINC01880-201ENST00000446593 NUP188Q5SRE5 1749 aa8.5□□□□□ -1.05
LINC01880-201ENST00000446593 MARCH10Q8NA82 808 aaPredicted RBP8.5□□□□□ -1.05
LINC01880-201ENST00000446593 MS4A3Q96HJ5 214 aa8.5□□□□□ -1.05
LINC01880-201ENST00000446593 SGIP1Q9BQI5 828 aa8.5□□□□□ -1.05
LINC01880-201ENST00000446593 AATKQ6ZMQ8 1374 aa8.49□□□□□ -1.05
LINC01880-201ENST00000446593 BCL9O00512 1426 aa8.49□□□□□ -1.05
LINC01880-201ENST00000446593 CSB-PGBD3P0DP91 1061 aa8.49□□□□□ -1.05
LINC01880-201ENST00000446593 POLD1P28340 1107 aa8.49□□□□□ -1.05
LINC01880-201ENST00000446593 SRPK2P78362 688 aaKnown RBP8.49□□□□□ -1.05
LINC01880-201ENST00000446593 COL5A2P05997 1499 aaPredicted RBP8.49□□□□□ -1.05
LINC01880-201ENST00000446593 BRD4O60885 1362 aaPredicted RBP8.48□□□□□ -1.05
LINC01880-201ENST00000446593 ADGRB1O14514 1584 aa8.48□□□□□ -1.05
LINC01880-201ENST00000446593 NRKQ7Z2Y5 1582 aa8.48□□□□□ -1.05
LINC01880-201ENST00000446593 WDR17Q8IZU2 1322 aa8.48□□□□□ -1.05
LINC01880-201ENST00000446593 MAP3K5Q99683 1374 aa8.48□□□□□ -1.05
LINC01880-201ENST00000446593 GRIN3BO60391 1043 aa8.47□□□□□ -1.05
LINC01880-201ENST00000446593 KLHL34Q8N239 644 aa8.47□□□□□ -1.05
LINC01880-201ENST00000446593 KCNH5Q8NCM2 988 aa8.47□□□□□ -1.05
LINC01880-201ENST00000446593 SLC16A10Q8TF71 515 aa8.47□□□□□ -1.05
LINC01880-201ENST00000446593 CARD10Q9BWT7 1032 aa8.47□□□□□ -1.05
LINC01880-201ENST00000446593 AXIN2Q9Y2T1 843 aa8.46□□□□□ -1.06
LINC01880-201ENST00000446593 ST18O60284 1047 aa8.45□□□□□ -1.06
LINC01880-201ENST00000446593 ATN1P54259 1190 aaPredicted RBP8.45□□□□□ -1.06
LINC01880-201ENST00000446593 CABP1Q9NZU7 370 aa8.45□□□□□ -1.06
LINC01880-201ENST00000446593 CEP350Q5VT06 3117 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms