RNA–Protein interactions for RNA: ENST00000446548.1

LINC00578-204, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-204ENST00000446548 ABCC11Q96J66 1382 aa11.91□□□□□ -0.5
LINC00578-204ENST00000446548 NPC1L1Q9UHC9 1359 aa11.91□□□□□ -0.5
LINC00578-204ENST00000446548 ERBB3P21860 1342 aa11.9□□□□□ -0.5
LINC00578-204ENST00000446548 LTKP29376 864 aa11.9□□□□□ -0.5
LINC00578-204ENST00000446548 DIP2AQ14689 1571 aa11.9□□□□□ -0.5
LINC00578-204ENST00000446548 UPF1Q92900 1129 aaKnown RBP eCLIP11.9□□□□□ -0.5
LINC00578-204ENST00000446548 PUS7Q96PZ0 661 aaKnown RBP11.9□□□□□ -0.5
LINC00578-204ENST00000446548 FAM205CA6NFA0 338 aa11.89□□□□□ -0.51
LINC00578-204ENST00000446548 PRAM1Q96QH2 718 aa11.89□□□□□ -0.51
LINC00578-204ENST00000446548 PLEKHH1Q9ULM0 1364 aa11.89□□□□□ -0.51
LINC00578-204ENST00000446548 SETD1BQ9UPS6 1966 aaKnown RBP11.88□□□□□ -0.51
LINC00578-204ENST00000446548 EVC2Q86UK5 1308 aa11.88□□□□□ -0.51
LINC00578-204ENST00000446548 NUDT7P0C024 238 aa11.88□□□□□ -0.51
LINC00578-204ENST00000446548 HDGFP51858 240 aaKnown RBP11.88□□□□□ -0.51
LINC00578-204ENST00000446548 CC2D1BQ5T0F9 858 aaKnown RBP11.88□□□□□ -0.51
LINC00578-204ENST00000446548 OXER1Q8TDS5 423 aa11.88□□□□□ -0.51
LINC00578-204ENST00000446548 KHSRPQ92945 711 aaKnown RBP eCLIP11.88□□□□□ -0.51
LINC00578-204ENST00000446548 XRN1Q8IZH2 1706 aaKnown RBP11.88□□□□□ -0.51
LINC00578-204ENST00000446548 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.88□□□□□ -0.51
LINC00578-204ENST00000446548 ANKRD26Q9UPS8 1709 aa11.88□□□□□ -0.51
LINC00578-204ENST00000446548 ADGRB2O60241 1585 aa11.88□□□□□ -0.51
LINC00578-204ENST00000446548 FAM135BQ49AJ0 1406 aa11.87□□□□□ -0.51
LINC00578-204ENST00000446548 SAFB2Q14151 953 aaKnown RBP eCLIP11.87□□□□□ -0.51
LINC00578-204ENST00000446548 CARD14Q9BXL6 1004 aa11.87□□□□□ -0.51
LINC00578-204ENST00000446548 PTPRUQ92729 1446 aa11.86□□□□□ -0.51
LINC00578-204ENST00000446548 HAP1P54257 671 aaPredicted RBP11.86□□□□□ -0.51
LINC00578-204ENST00000446548 KNSTRNQ9Y448 316 aa11.86□□□□□ -0.51
LINC00578-204ENST00000446548 NSD3Q9BZ95 1437 aa11.86□□□□□ -0.51
LINC00578-204ENST00000446548 MINK1Q8N4C8 1332 aaPredicted RBP11.86□□□□□ -0.51
LINC00578-204ENST00000446548 CD163L1Q9NR16 1453 aa11.85□□□□□ -0.51
LINC00578-204ENST00000446548 TXNDC2Q86VQ3 553 aa11.85□□□□□ -0.51
LINC00578-204ENST00000446548 NLRP13Q86W25 1043 aa11.85□□□□□ -0.51
LINC00578-204ENST00000446548 FAM9BQ8IZU0 186 aa11.85□□□□□ -0.51
LINC00578-204ENST00000446548 PNISRQ8TF01 805 aaKnown RBP11.85□□□□□ -0.51
LINC00578-204ENST00000446548 HS3ST6Q96QI5 342 aa11.85□□□□□ -0.51
LINC00578-204ENST00000446548 POGKQ9P215 609 aa11.85□□□□□ -0.51
LINC00578-204ENST00000446548 PCDH10Q9P2E7 1040 aa11.85□□□□□ -0.51
LINC00578-204ENST00000446548 KIF20BQ96Q89 1820 aa11.85□□□□□ -0.51
LINC00578-204ENST00000446548 ANKRD36BQ8N2N9 1353 aa11.84□□□□□ -0.51
LINC00578-204ENST00000446548 NINLQ9Y2I6 1382 aa11.84□□□□□ -0.51
LINC00578-204ENST00000446548 MAP3K9P80192 1104 aa11.84□□□□□ -0.51
LINC00578-204ENST00000446548 CAMK2BQ13554 666 aa11.84□□□□□ -0.51
LINC00578-204ENST00000446548 WAPLQ7Z5K2 1190 aa11.84□□□□□ -0.51
LINC00578-204ENST00000446548 THEMISQ8N1K5 641 aaPredicted RBP11.84□□□□□ -0.51
LINC00578-204ENST00000446548 SIRT1Q96EB6 747 aa11.84□□□□□ -0.51
LINC00578-204ENST00000446548 SLC12A5Q9H2X9 1139 aa11.84□□□□□ -0.51
LINC00578-204ENST00000446548 AKAP12Q02952 1782 aa11.84□□□□□ -0.51
LINC00578-204ENST00000446548 TOPAZ1Q8N9V7 1692 aa11.84□□□□□ -0.51
LINC00578-204ENST00000446548 ATAD2Q6PL18 1390 aa11.83□□□□□ -0.52
LINC00578-204ENST00000446548 ROBO2Q9HCK4 1378 aa11.83□□□□□ -0.52
LINC00578-204ENST00000446548 HNRNPUQ00839 825 aaKnown RBP eCLIP11.83□□□□□ -0.52
LINC00578-204ENST00000446548 TMC1Q8TDI8 760 aa11.83□□□□□ -0.52
LINC00578-204ENST00000446548 CHD2O14647 1828 aaKnown RBP11.83□□□□□ -0.52
LINC00578-204ENST00000446548 MON2Q7Z3U7 1717 aa11.83□□□□□ -0.52
LINC00578-204ENST00000446548 E2F4Q16254 413 aa11.82□□□□□ -0.52
LINC00578-204ENST00000446548 VARS2Q5ST30 1063 aaKnown RBP11.82□□□□□ -0.52
LINC00578-204ENST00000446548 EID1Q9Y6B2 187 aa11.82□□□□□ -0.52
LINC00578-204ENST00000446548 ITSN1Q15811 1721 aa11.82□□□□□ -0.52
LINC00578-204ENST00000446548 A0A1W2PP64 1363 aa11.81□□□□□ -0.52
LINC00578-204ENST00000446548 PPP2R1AP30153 589 aa11.81□□□□□ -0.52
LINC00578-204ENST00000446548 CDAN1Q8IWY9 1227 aa11.81□□□□□ -0.52
LINC00578-204ENST00000446548 CDK19Q9BWU1 502 aa11.81□□□□□ -0.52
LINC00578-204ENST00000446548 EMILIN3Q9NT22 766 aa11.81□□□□□ -0.52
LINC00578-204ENST00000446548 GTF3C3Q9Y5Q9 886 aa11.81□□□□□ -0.52
LINC00578-204ENST00000446548 SHPRHQ149N8 1683 aa11.81□□□□□ -0.52
LINC00578-204ENST00000446548 PTCH1Q13635 1447 aa11.8□□□□□ -0.52
LINC00578-204ENST00000446548 PSDA5PKW4 1024 aaPredicted RBP11.8□□□□□ -0.52
LINC00578-204ENST00000446548 SRPK2P78362 688 aaKnown RBP11.8□□□□□ -0.52
LINC00578-204ENST00000446548 BCANQ96GW7 911 aa11.8□□□□□ -0.52
LINC00578-204ENST00000446548 TBX22Q9Y458 520 aa11.8□□□□□ -0.52
LINC00578-204ENST00000446548 ATP7BP35670 1465 aa11.8□□□□□ -0.52
LINC00578-204ENST00000446548 CDC42BPGQ6DT37 1551 aa11.79□□□□□ -0.52
LINC00578-204ENST00000446548 BLMP54132 1417 aaPredicted RBP11.79□□□□□ -0.52
LINC00578-204ENST00000446548 SLC26A8Q96RN1 970 aa11.79□□□□□ -0.52
LINC00578-204ENST00000446548 LHX6Q9UPM6 363 aa11.79□□□□□ -0.52
LINC00578-204ENST00000446548 ZBED9Q6R2W3 1325 aa11.79□□□□□ -0.52
LINC00578-204ENST00000446548 INSRP06213 1382 aa11.79□□□□□ -0.52
LINC00578-204ENST00000446548 NSD2O96028 1365 aa11.78□□□□□ -0.52
LINC00578-204ENST00000446548 NRKQ7Z2Y5 1582 aa11.77□□□□□ -0.53
LINC00578-204ENST00000446548 WASLO00401 505 aaPredicted RBP11.77□□□□□ -0.53
LINC00578-204ENST00000446548 EVI5O60447 810 aa11.77□□□□□ -0.53
LINC00578-204ENST00000446548 PIK3R4Q99570 1358 aa11.77□□□□□ -0.53
LINC00578-204ENST00000446548 NALCNQ8IZF0 1738 aa11.77□□□□□ -0.53
LINC00578-204ENST00000446548 RGPD8O14715 1765 aaPredicted RBP11.77□□□□□ -0.53
LINC00578-204ENST00000446548 KDM4FA0A1W2PPD8 638 aa11.76□□□□□ -0.53
LINC00578-204ENST00000446548 FMN2Q9NZ56 1722 aa11.76□□□□□ -0.53
LINC00578-204ENST00000446548 CPSF1Q10570 1443 aaKnown RBP11.76□□□□□ -0.53
LINC00578-204ENST00000446548 DPYSL4O14531 572 aa11.75□□□□□ -0.53
LINC00578-204ENST00000446548 CGNL1Q0VF96 1302 aa11.75□□□□□ -0.53
LINC00578-204ENST00000446548 PPIP5K1Q6PFW1 1433 aa11.75□□□□□ -0.53
LINC00578-204ENST00000446548 POTEB3A0JP26 581 aa11.74□□□□□ -0.53
LINC00578-204ENST00000446548 POTEBQ6S5H4 581 aa11.74□□□□□ -0.53
LINC00578-204ENST00000446548 TERF2IPQ9NYB0 399 aa11.74□□□□□ -0.53
LINC00578-204ENST00000446548 CABP1Q9NZU7 370 aa11.74□□□□□ -0.53
LINC00578-204ENST00000446548 AMOTL2Q9Y2J4 779 aa11.74□□□□□ -0.53
LINC00578-204ENST00000446548 PRR36Q9H6K5 1346 aa11.74□□□□□ -0.53
LINC00578-204ENST00000446548 NWD1Q149M9 1564 aa11.74□□□□□ -0.53
LINC00578-204ENST00000446548 NKTRP30414 1462 aaKnown RBP11.73□□□□□ -0.53
LINC00578-204ENST00000446548 ANKLE2Q86XL3 938 aa11.73□□□□□ -0.53
LINC00578-204ENST00000446548 ZNF687Q8N1G0 1237 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms