RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 MARCH10Q8NA82 808 aaPredicted RBP20.29■□□□□ 0.84
SMARCAL1-210ENST00000445153 OVOS2A0A0G2JMS6 1433 aa20.28■□□□□ 0.84
SMARCAL1-210ENST00000445153 OVOS2A0A0J9YW53 1432 aa20.28■□□□□ 0.84
SMARCAL1-210ENST00000445153 OVOS2Q6IE36 1432 aa20.28■□□□□ 0.84
SMARCAL1-210ENST00000445153 NBPF14Q5TI25 921 aa20.28■□□□□ 0.84
SMARCAL1-210ENST00000445153 RGPD5Q99666 1765 aa20.28■□□□□ 0.84
SMARCAL1-210ENST00000445153 TTC21AQ8NDW8 1320 aa20.27■□□□□ 0.84
SMARCAL1-210ENST00000445153 KTN1Q86UP2 1357 aaKnown RBP20.27■□□□□ 0.84
SMARCAL1-210ENST00000445153 KCNH5Q8NCM2 988 aa20.27■□□□□ 0.84
SMARCAL1-210ENST00000445153 SBF2Q86WG5 1849 aa20.26■□□□□ 0.83
SMARCAL1-210ENST00000445153 PROM2Q8N271 834 aa20.26■□□□□ 0.83
SMARCAL1-210ENST00000445153 CARD10Q9BWT7 1032 aa20.26■□□□□ 0.83
SMARCAL1-210ENST00000445153 C11orf95C9JLR9 678 aaPredicted RBP20.25■□□□□ 0.83
SMARCAL1-210ENST00000445153 PLSCR1O15162 318 aa20.25■□□□□ 0.83
SMARCAL1-210ENST00000445153 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.25■□□□□ 0.83
SMARCAL1-210ENST00000445153 NFAT5O94916 1531 aa20.25■□□□□ 0.83
SMARCAL1-210ENST00000445153 BCL11BQ9C0K0 894 aaPredicted RBP20.24■□□□□ 0.83
SMARCAL1-210ENST00000445153 CD163L1Q9NR16 1453 aa20.24■□□□□ 0.83
SMARCAL1-210ENST00000445153 CSB-PGBD3P0DP91 1061 aa20.23■□□□□ 0.83
SMARCAL1-210ENST00000445153 ANO8Q9HCE9 1232 aaPredicted RBP20.23■□□□□ 0.83
SMARCAL1-210ENST00000445153 WNK3Q9BYP7 1800 aa20.23■□□□□ 0.83
SMARCAL1-210ENST00000445153 NME9Q86XW9 330 aa20.22■□□□□ 0.83
SMARCAL1-210ENST00000445153 CDCA7Q9BWT1 371 aaPredicted RBP20.22■□□□□ 0.83
SMARCAL1-210ENST00000445153 CARD11Q9BXL7 1154 aa20.22■□□□□ 0.83
SMARCAL1-210ENST00000445153 SBNO2Q9Y2G9 1366 aa20.21■□□□□ 0.83
SMARCAL1-210ENST00000445153 PDGFDQ9GZP0 370 aaPredicted RBP20.21■□□□□ 0.83
SMARCAL1-210ENST00000445153 SLC12A5Q9H2X9 1139 aa20.21■□□□□ 0.83
SMARCAL1-210ENST00000445153 USP31Q70CQ4 1352 aa20.21■□□□□ 0.83
SMARCAL1-210ENST00000445153 BCL9O00512 1426 aa20.2■□□□□ 0.82
SMARCAL1-210ENST00000445153 MON2Q7Z3U7 1717 aa20.2■□□□□ 0.82
SMARCAL1-210ENST00000445153 KCNQ2O43526 872 aa20.2■□□□□ 0.82
SMARCAL1-210ENST00000445153 EXOC5O00471 708 aa20.19■□□□□ 0.82
SMARCAL1-210ENST00000445153 TMC1Q8TDI8 760 aa20.18■□□□□ 0.82
SMARCAL1-210ENST00000445153 SPON1Q9HCB6 807 aa20.18■□□□□ 0.82
SMARCAL1-210ENST00000445153 RGPD3A6NKT7 1758 aaPredicted RBP20.17■□□□□ 0.82
SMARCAL1-210ENST00000445153 RGPD4Q7Z3J3 1758 aa20.17■□□□□ 0.82
SMARCAL1-210ENST00000445153 CCDC7Q96M83 1385 aa20.16■□□□□ 0.82
SMARCAL1-210ENST00000445153 ERBB3P21860 1342 aa20.15■□□□□ 0.82
SMARCAL1-210ENST00000445153 TXNRD1Q16881 649 aa20.14■□□□□ 0.81
SMARCAL1-210ENST00000445153 USP54Q70EL1 1684 aa20.13■□□□□ 0.81
SMARCAL1-210ENST00000445153 ABCC6O95255 1503 aa20.13■□□□□ 0.81
SMARCAL1-210ENST00000445153 NLRP2Q9NX02 1062 aa20.13■□□□□ 0.81
SMARCAL1-210ENST00000445153 TNS2Q63HR2 1409 aa20.12■□□□□ 0.81
SMARCAL1-210ENST00000445153 A0A1W2PP64 1363 aa20.12■□□□□ 0.81
SMARCAL1-210ENST00000445153 HDGFL2Q7Z4V5 671 aaPredicted RBP20.12■□□□□ 0.81
SMARCAL1-210ENST00000445153 ACSBG1Q96GR2 724 aa20.12■□□□□ 0.81
SMARCAL1-210ENST00000445153 PPP1R1BQ9UD71 204 aaPredicted RBP20.12■□□□□ 0.81
SMARCAL1-210ENST00000445153 CASZ1Q86V15 1759 aa20.12■□□□□ 0.81
SMARCAL1-210ENST00000445153 ANKRD24Q8TF21 1146 aa20.11■□□□□ 0.81
SMARCAL1-210ENST00000445153 EDC4Q6P2E9 1401 aaKnown RBP20.1■□□□□ 0.81
SMARCAL1-210ENST00000445153 ZBTB7AO95365 584 aa20.1■□□□□ 0.81
SMARCAL1-210ENST00000445153 TESK2Q96S53 571 aa20.1■□□□□ 0.81
SMARCAL1-210ENST00000445153 TONSLQ96HA7 1378 aa20.09■□□□□ 0.81
SMARCAL1-210ENST00000445153 LTN1O94822 1766 aa20.09■□□□□ 0.81
SMARCAL1-210ENST00000445153 IL2RBP14784 551 aa20.09■□□□□ 0.81
SMARCAL1-210ENST00000445153 TERF2IPQ9NYB0 399 aa20.09■□□□□ 0.81
SMARCAL1-210ENST00000445153 FBLN1P23142 703 aa20.08■□□□□ 0.81
SMARCAL1-210ENST00000445153 PTGER2P43116 358 aa20.08■□□□□ 0.81
SMARCAL1-210ENST00000445153 SLC15A2Q16348 729 aa20.08■□□□□ 0.81
SMARCAL1-210ENST00000445153 PUS7Q96PZ0 661 aaKnown RBP20.08■□□□□ 0.81
SMARCAL1-210ENST00000445153 ST20-MTHFSA0A0A6YYL1 179 aa20.07■□□□□ 0.8
SMARCAL1-210ENST00000445153 ATF5Q9Y2D1 282 aaPredicted RBP20.07■□□□□ 0.8
SMARCAL1-210ENST00000445153 IP6K1Q92551 441 aa20.06■□□□□ 0.8
SMARCAL1-210ENST00000445153 STK32BQ9NY57 414 aa20.06■□□□□ 0.8
SMARCAL1-210ENST00000445153 NINLQ9Y2I6 1382 aa20.06■□□□□ 0.8
SMARCAL1-210ENST00000445153 NHSQ6T4R5 1651 aa20.05■□□□□ 0.8
SMARCAL1-210ENST00000445153 YY1P25490 414 aa20.04■□□□□ 0.8
SMARCAL1-210ENST00000445153 LTV1Q96GA3 475 aaPredicted RBP20.04■□□□□ 0.8
SMARCAL1-210ENST00000445153 LRRC4BQ9NT99 713 aa20.02■□□□□ 0.8
SMARCAL1-210ENST00000445153 MAP3K19Q56UN5 1328 aa20.02■□□□□ 0.79
SMARCAL1-210ENST00000445153 SGIP1Q9BQI5 828 aa20.01■□□□□ 0.79
SMARCAL1-210ENST00000445153 MYOM1P52179 1685 aa20■□□□□ 0.79
SMARCAL1-210ENST00000445153 DDX54Q8TDD1 881 aaKnown RBP20■□□□□ 0.79
SMARCAL1-210ENST00000445153 BTAF1O14981 1849 aa19.99■□□□□ 0.79
SMARCAL1-210ENST00000445153 HOXC9P31274 260 aa19.99■□□□□ 0.79
SMARCAL1-210ENST00000445153 ZNF827Q17R98 1081 aa19.99■□□□□ 0.79
SMARCAL1-210ENST00000445153 PAPPAQ13219 1627 aa19.98■□□□□ 0.79
SMARCAL1-210ENST00000445153 TRIM26Q12899 539 aaPredicted RBP19.98■□□□□ 0.79
SMARCAL1-210ENST00000445153 COG3Q96JB2 828 aa19.98■□□□□ 0.79
SMARCAL1-210ENST00000445153 SYT17Q9BSW7 474 aa19.97■□□□□ 0.79
SMARCAL1-210ENST00000445153 FHDC1Q9C0D6 1143 aaPredicted RBP19.97■□□□□ 0.79
SMARCAL1-210ENST00000445153 MTFR1LQ9H019 292 aa19.97■□□□□ 0.79
SMARCAL1-210ENST00000445153 FYB1O15117 783 aa19.95■□□□□ 0.78
SMARCAL1-210ENST00000445153 KCNQ4P56696 695 aa19.95■□□□□ 0.78
SMARCAL1-210ENST00000445153 KAT6BQ8WYB5 2073 aa19.95■□□□□ 0.78
SMARCAL1-210ENST00000445153 RGPD2P0DJD1 1756 aa19.94■□□□□ 0.78
SMARCAL1-210ENST00000445153 DCAF8L1A6NGE4 600 aa19.94■□□□□ 0.78
SMARCAL1-210ENST00000445153 AMPHP49418 695 aa19.94■□□□□ 0.78
SMARCAL1-210ENST00000445153 RRS1Q15050 365 aaKnown RBP19.94■□□□□ 0.78
SMARCAL1-210ENST00000445153 AKT1S1Q96B36 256 aa19.94■□□□□ 0.78
SMARCAL1-210ENST00000445153 GGNBP2Q9H3C7 697 aa19.94■□□□□ 0.78
SMARCAL1-210ENST00000445153 ANKRD36BQ8N2N9 1353 aa19.94■□□□□ 0.78
SMARCAL1-210ENST00000445153 FAM208AQ9UK61 1670 aaKnown RBP19.94■□□□□ 0.78
SMARCAL1-210ENST00000445153 PRIM1P49642 420 aaKnown RBP19.93■□□□□ 0.78
SMARCAL1-210ENST00000445153 NBPF6Q5VWK0 638 aa19.92■□□□□ 0.78
SMARCAL1-210ENST00000445153 NBPF4Q96M43 638 aa19.92■□□□□ 0.78
SMARCAL1-210ENST00000445153 MEGF6O75095 1541 aa19.92■□□□□ 0.78
SMARCAL1-210ENST00000445153 ZCRB1Q8TBF4 217 aaKnown RBP19.91■□□□□ 0.78
SMARCAL1-210ENST00000445153 SLC24A1O60721 1099 aa19.9■□□□□ 0.78
SMARCAL1-210ENST00000445153 USHBP1Q8N6Y0 703 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms