RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 CARD14Q9BXL6 1004 aa23.63■■□□□ 1.37
LIME1-202ENST00000444951 NLRP13Q86W25 1043 aa23.62■■□□□ 1.37
LIME1-202ENST00000444951 SLIT3O75094 1523 aa23.62■■□□□ 1.37
LIME1-202ENST00000444951 NSD3Q9BZ95 1437 aa23.61■■□□□ 1.37
LIME1-202ENST00000444951 PSDA5PKW4 1024 aaPredicted RBP23.61■■□□□ 1.37
LIME1-202ENST00000444951 EVA1CP58658 441 aa23.61■■□□□ 1.37
LIME1-202ENST00000444951 CNGB1Q14028 1251 aaPredicted RBP23.61■■□□□ 1.37
LIME1-202ENST00000444951 MON2Q7Z3U7 1717 aa23.61■■□□□ 1.37
LIME1-202ENST00000444951 BRD4O60885 1362 aaPredicted RBP23.6■■□□□ 1.37
LIME1-202ENST00000444951 COL5A2P05997 1499 aaPredicted RBP23.6■■□□□ 1.37
LIME1-202ENST00000444951 DISP2A7MBM2 1401 aa23.59■■□□□ 1.37
LIME1-202ENST00000444951 BARGINQ6ZT62 677 aa23.59■■□□□ 1.37
LIME1-202ENST00000444951 KNSTRNQ9Y448 316 aa23.58■■□□□ 1.37
LIME1-202ENST00000444951 EDC4Q6P2E9 1401 aaKnown RBP23.58■■□□□ 1.36
LIME1-202ENST00000444951 TTC21BQ7Z4L5 1316 aa23.58■■□□□ 1.36
LIME1-202ENST00000444951 ZBTB7CA1YPR0 619 aa23.57■■□□□ 1.36
LIME1-202ENST00000444951 TRIM37O94972 964 aa23.57■■□□□ 1.36
LIME1-202ENST00000444951 NLRP6P59044 892 aa23.57■■□□□ 1.36
LIME1-202ENST00000444951 COL18A1P39060 1754 aa23.57■■□□□ 1.36
LIME1-202ENST00000444951 TCP11L2Q8N4U5 519 aa23.56■■□□□ 1.36
LIME1-202ENST00000444951 LRP5O75197 1615 aa23.55■■□□□ 1.36
LIME1-202ENST00000444951 EZH2Q15910 746 aaKnown RBP23.55■■□□□ 1.36
LIME1-202ENST00000444951 FAM196AQ6ZSG2 479 aa23.54■■□□□ 1.36
LIME1-202ENST00000444951 NME9Q86XW9 330 aa23.54■■□□□ 1.36
LIME1-202ENST00000444951 PARP4Q9UKK3 1724 aaKnown RBP23.53■■□□□ 1.36
LIME1-202ENST00000444951 AATKQ6ZMQ8 1374 aa23.52■■□□□ 1.36
LIME1-202ENST00000444951 PER1O15534 1290 aaPredicted RBP23.52■■□□□ 1.36
LIME1-202ENST00000444951 CAMKK2Q96RR4 588 aa23.52■■□□□ 1.36
LIME1-202ENST00000444951 CRB1P82279 1406 aa23.51■■□□□ 1.35
LIME1-202ENST00000444951 PDE3BQ13370 1112 aa23.51■■□□□ 1.35
LIME1-202ENST00000444951 GGNBP2Q9H3C7 697 aa23.51■■□□□ 1.35
LIME1-202ENST00000444951 CGNL1Q0VF96 1302 aa23.51■■□□□ 1.35
LIME1-202ENST00000444951 TTC21AQ8NDW8 1320 aa23.51■■□□□ 1.35
LIME1-202ENST00000444951 CC2D1BQ5T0F9 858 aaKnown RBP23.5■■□□□ 1.35
LIME1-202ENST00000444951 AXIN2Q9Y2T1 843 aa23.5■■□□□ 1.35
LIME1-202ENST00000444951 RGPD5Q99666 1765 aa23.5■■□□□ 1.35
LIME1-202ENST00000444951 R3HDM1Q15032 1099 aaKnown RBP23.49■■□□□ 1.35
LIME1-202ENST00000444951 THRAP3Q9Y2W1 955 aaKnown RBP23.49■■□□□ 1.35
LIME1-202ENST00000444951 LRRC37A3O60309 1634 aa23.48■■□□□ 1.35
LIME1-202ENST00000444951 RREB1Q92766 1687 aa23.48■■□□□ 1.35
LIME1-202ENST00000444951 KIF20BQ96Q89 1820 aa23.48■■□□□ 1.35
LIME1-202ENST00000444951 FYB1O15117 783 aa23.48■■□□□ 1.35
LIME1-202ENST00000444951 APBA3O96018 575 aa23.48■■□□□ 1.35
LIME1-202ENST00000444951 PEAK1Q9H792 1746 aa23.47■■□□□ 1.35
LIME1-202ENST00000444951 SOX12O15370 315 aa23.47■■□□□ 1.35
LIME1-202ENST00000444951 WNK3Q9BYP7 1800 aa23.47■■□□□ 1.35
LIME1-202ENST00000444951 NFAT5O94916 1531 aa23.46■■□□□ 1.35
LIME1-202ENST00000444951 AMER1Q5JTC6 1135 aaPredicted RBP23.46■■□□□ 1.35
LIME1-202ENST00000444951 NUP188Q5SRE5 1749 aa23.45■■□□□ 1.34
LIME1-202ENST00000444951 ARHGEF25Q86VW2 580 aa23.45■■□□□ 1.34
LIME1-202ENST00000444951 COG3Q96JB2 828 aa23.45■■□□□ 1.34
LIME1-202ENST00000444951 TOM1L2Q6ZVM7 507 aa23.43■■□□□ 1.34
LIME1-202ENST00000444951 WDR17Q8IZU2 1322 aa23.42■■□□□ 1.34
LIME1-202ENST00000444951 TNNT2P45379 298 aaPredicted RBP23.42■■□□□ 1.34
LIME1-202ENST00000444951 MORC1Q86VD1 984 aa23.42■■□□□ 1.34
LIME1-202ENST00000444951 SBF2Q86WG5 1849 aa23.42■■□□□ 1.34
LIME1-202ENST00000444951 PARD3Q8TEW0 1356 aa23.4■■□□□ 1.34
LIME1-202ENST00000444951 NSD2O96028 1365 aa23.4■■□□□ 1.34
LIME1-202ENST00000444951 KCNH5Q8NCM2 988 aa23.39■■□□□ 1.33
LIME1-202ENST00000444951 OVOS2A0A0G2JMS6 1433 aa23.39■■□□□ 1.33
LIME1-202ENST00000444951 OVOS2A0A0J9YW53 1432 aa23.39■■□□□ 1.33
LIME1-202ENST00000444951 OVOS2Q6IE36 1432 aa23.39■■□□□ 1.33
LIME1-202ENST00000444951 USP31Q70CQ4 1352 aa23.39■■□□□ 1.33
LIME1-202ENST00000444951 USP54Q70EL1 1684 aa23.38■■□□□ 1.33
LIME1-202ENST00000444951 DIEXFQ68CQ4 756 aaKnown RBP23.38■■□□□ 1.33
LIME1-202ENST00000444951 PTF1AQ7RTS3 328 aa23.38■■□□□ 1.33
LIME1-202ENST00000444951 ANKRD26Q9UPS8 1709 aa23.37■■□□□ 1.33
LIME1-202ENST00000444951 DDB1Q16531 1140 aa23.37■■□□□ 1.33
LIME1-202ENST00000444951 FBLN1P23142 703 aa23.36■■□□□ 1.33
LIME1-202ENST00000444951 MARCH10Q8NA82 808 aaPredicted RBP23.35■■□□□ 1.33
LIME1-202ENST00000444951 NPC1L1Q9UHC9 1359 aa23.35■■□□□ 1.33
LIME1-202ENST00000444951 CARD10Q9BWT7 1032 aa23.34■■□□□ 1.33
LIME1-202ENST00000444951 CSB-PGBD3P0DP91 1061 aa23.33■■□□□ 1.33
LIME1-202ENST00000444951 ABCC6O95255 1503 aa23.33■■□□□ 1.32
LIME1-202ENST00000444951 LTN1O94822 1766 aa23.32■■□□□ 1.32
LIME1-202ENST00000444951 ANP32CO43423 234 aa23.32■■□□□ 1.32
LIME1-202ENST00000444951 RGPD3A6NKT7 1758 aaPredicted RBP23.31■■□□□ 1.32
LIME1-202ENST00000444951 RGPD4Q7Z3J3 1758 aa23.31■■□□□ 1.32
LIME1-202ENST00000444951 RRS1Q15050 365 aaKnown RBP23.29■■□□□ 1.32
LIME1-202ENST00000444951 PPM1GO15355 546 aaPredicted RBP23.28■■□□□ 1.32
LIME1-202ENST00000444951 CDCA7Q9BWT1 371 aaPredicted RBP23.28■■□□□ 1.32
LIME1-202ENST00000444951 PRKRIP1Q9H875 184 aaPredicted RBP23.28■■□□□ 1.32
LIME1-202ENST00000444951 BCL9O00512 1426 aa23.27■■□□□ 1.32
LIME1-202ENST00000444951 RALBP1Q15311 655 aa23.27■■□□□ 1.32
LIME1-202ENST00000444951 BCL11BQ9C0K0 894 aaPredicted RBP23.27■■□□□ 1.32
LIME1-202ENST00000444951 ERBB3P21860 1342 aa23.27■■□□□ 1.32
LIME1-202ENST00000444951 TNS2Q63HR2 1409 aa23.26■■□□□ 1.31
LIME1-202ENST00000444951 NBPF14Q5TI25 921 aa23.26■■□□□ 1.31
LIME1-202ENST00000444951 ANO8Q9HCE9 1232 aaPredicted RBP23.26■■□□□ 1.31
LIME1-202ENST00000444951 PLSCR1O15162 318 aa23.25■■□□□ 1.31
LIME1-202ENST00000444951 EMILIN1Q9Y6C2 1016 aa23.25■■□□□ 1.31
LIME1-202ENST00000444951 PPP2R1AP30153 589 aa23.24■■□□□ 1.31
LIME1-202ENST00000444951 PROM2Q8N271 834 aa23.24■■□□□ 1.31
LIME1-202ENST00000444951 MAP3K19Q56UN5 1328 aa23.24■■□□□ 1.31
LIME1-202ENST00000444951 EXOC5O00471 708 aa23.23■■□□□ 1.31
LIME1-202ENST00000444951 AMPHP49418 695 aa23.23■■□□□ 1.31
LIME1-202ENST00000444951 ANKRD24Q8TF21 1146 aa23.22■■□□□ 1.31
LIME1-202ENST00000444951 NLRP2Q9NX02 1062 aa23.22■■□□□ 1.31
LIME1-202ENST00000444951 POLKQ9UBT6 870 aa23.22■■□□□ 1.31
LIME1-202ENST00000444951 MAP2P11137 1827 aaKnown RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms