RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 NUTM2GQ5VZR2 741 aa15.58■□□□□ 0.08
HDAC8-215ENST00000444609 CRB1P82279 1406 aa15.58■□□□□ 0.08
HDAC8-215ENST00000444609 COL5A2P05997 1499 aaPredicted RBP15.56■□□□□ 0.08
HDAC8-215ENST00000444609 ANKRD30BQ9BXX2 1392 aa15.55■□□□□ 0.08
HDAC8-215ENST00000444609 HTRA3P83110 453 aa15.55■□□□□ 0.08
HDAC8-215ENST00000444609 AKT1S1Q96B36 256 aa15.55■□□□□ 0.08
HDAC8-215ENST00000444609 LMO7Q8WWI1 1683 aa15.54■□□□□ 0.08
HDAC8-215ENST00000444609 C14orf93Q9H972 538 aaKnown RBP15.54■□□□□ 0.08
HDAC8-215ENST00000444609 POGKQ9P215 609 aa15.54■□□□□ 0.08
HDAC8-215ENST00000444609 LRRC37A3O60309 1634 aa15.54■□□□□ 0.08
HDAC8-215ENST00000444609 PHRF1Q9P1Y6 1649 aaKnown RBP15.54■□□□□ 0.08
HDAC8-215ENST00000444609 PIK3C2GO75747 1445 aa15.53■□□□□ 0.08
HDAC8-215ENST00000444609 CDCA7Q9BWT1 371 aaPredicted RBP15.53■□□□□ 0.08
HDAC8-215ENST00000444609 LRRC4BQ9NT99 713 aa15.53■□□□□ 0.08
HDAC8-215ENST00000444609 PAPPAQ13219 1627 aa15.53■□□□□ 0.08
HDAC8-215ENST00000444609 EIF3AQ14152 1382 aaKnown RBP15.52■□□□□ 0.08
HDAC8-215ENST00000444609 PNPLA7Q6ZV29 1317 aa15.52■□□□□ 0.08
HDAC8-215ENST00000444609 RGL3Q3MIN7 710 aa15.52■□□□□ 0.08
HDAC8-215ENST00000444609 HIRIP3Q9BW71 556 aaPredicted RBP15.52■□□□□ 0.08
HDAC8-215ENST00000444609 TOM1L2Q6ZVM7 507 aa15.5■□□□□ 0.07
HDAC8-215ENST00000444609 COL24A1Q17RW2 1714 aa15.5■□□□□ 0.07
HDAC8-215ENST00000444609 WASLO00401 505 aaPredicted RBP15.49■□□□□ 0.07
HDAC8-215ENST00000444609 GCP02774 474 aa15.49■□□□□ 0.07
HDAC8-215ENST00000444609 USP19O94966 1318 aa15.48■□□□□ 0.07
HDAC8-215ENST00000444609 EXOC5O00471 708 aa15.48■□□□□ 0.07
HDAC8-215ENST00000444609 CD2APQ9Y5K6 639 aa15.48■□□□□ 0.07
HDAC8-215ENST00000444609 PCNTO95613 3336 aa15.48■□□□□ 0.07
HDAC8-215ENST00000444609 TULP4Q9NRJ4 1543 aa15.48■□□□□ 0.07
HDAC8-215ENST00000444609 HSPA1AP0DMV8 641 aaKnown RBP15.47■□□□□ 0.07
HDAC8-215ENST00000444609 HSPA1BP0DMV9 641 aaKnown RBP15.47■□□□□ 0.07
HDAC8-215ENST00000444609 ITGAEP38570 1179 aa15.47■□□□□ 0.07
HDAC8-215ENST00000444609 CFAP70Q5T0N1 1121 aa15.47■□□□□ 0.07
HDAC8-215ENST00000444609 ABTB2Q8N961 1025 aa15.47■□□□□ 0.07
HDAC8-215ENST00000444609 RBM46Q8TBY0 533 aaKnown RBP15.47■□□□□ 0.07
HDAC8-215ENST00000444609 MINK1Q8N4C8 1332 aaPredicted RBP15.46■□□□□ 0.07
HDAC8-215ENST00000444609 WDR90Q96KV7 1748 aa15.46■□□□□ 0.07
HDAC8-215ENST00000444609 ACSBG1Q96GR2 724 aa15.46■□□□□ 0.07
HDAC8-215ENST00000444609 TFCP2L1Q9NZI6 479 aa15.46■□□□□ 0.07
HDAC8-215ENST00000444609 TOPAZ1Q8N9V7 1692 aa15.46■□□□□ 0.07
HDAC8-215ENST00000444609 SPATA31E1Q6ZUB1 1445 aa15.44■□□□□ 0.06
HDAC8-215ENST00000444609 BRD4O60885 1362 aaPredicted RBP15.44■□□□□ 0.06
HDAC8-215ENST00000444609 FSTL1Q12841 308 aa15.43■□□□□ 0.06
HDAC8-215ENST00000444609 SLC27A3Q5K4L6 730 aa15.43■□□□□ 0.06
HDAC8-215ENST00000444609 NLRP13Q86W25 1043 aa15.43■□□□□ 0.06
HDAC8-215ENST00000444609 WDR17Q8IZU2 1322 aa15.43■□□□□ 0.06
HDAC8-215ENST00000444609 NUDT16Q96DE0 195 aaKnown RBP15.42■□□□□ 0.06
HDAC8-215ENST00000444609 NMRK2Q9NPI5 230 aa15.42■□□□□ 0.06
HDAC8-215ENST00000444609 USP6P35125 1406 aa15.42■□□□□ 0.06
HDAC8-215ENST00000444609 ZBTB7CA1YPR0 619 aa15.41■□□□□ 0.06
HDAC8-215ENST00000444609 POLR3AO14802 1390 aaPredicted RBP15.4■□□□□ 0.06
HDAC8-215ENST00000444609 CARD10Q9BWT7 1032 aa15.4■□□□□ 0.06
HDAC8-215ENST00000444609 SLC4A1APQ9BWU0 796 aaKnown RBP15.4■□□□□ 0.06
HDAC8-215ENST00000444609 AXIN2Q9Y2T1 843 aa15.4■□□□□ 0.06
HDAC8-215ENST00000444609 ACEP12821 1306 aa15.4■□□□□ 0.06
HDAC8-215ENST00000444609 ARHGEF28Q8N1W1 1705 aaKnown RBP15.4■□□□□ 0.06
HDAC8-215ENST00000444609 TRAK1Q9UPV9 953 aa15.39■□□□□ 0.05
HDAC8-215ENST00000444609 TNS2Q63HR2 1409 aa15.38■□□□□ 0.05
HDAC8-215ENST00000444609 LOC105371045A0A1W2PR82 267 aa15.38■□□□□ 0.05
HDAC8-215ENST00000444609 FAM161AQ3B820 660 aa15.38■□□□□ 0.05
HDAC8-215ENST00000444609 AKAP12Q02952 1782 aa15.37■□□□□ 0.05
HDAC8-215ENST00000444609 COL23A1Q86Y22 540 aaPredicted RBP15.37■□□□□ 0.05
HDAC8-215ENST00000444609 C16orf71Q8IYS4 520 aaPredicted RBP15.37■□□□□ 0.05
HDAC8-215ENST00000444609 NHSQ6T4R5 1651 aa15.37■□□□□ 0.05
HDAC8-215ENST00000444609 QSER1Q2KHR3 1735 aa15.37■□□□□ 0.05
HDAC8-215ENST00000444609 MSH5O43196 834 aa15.36■□□□□ 0.05
HDAC8-215ENST00000444609 MSL1Q68DK7 614 aa15.36■□□□□ 0.05
HDAC8-215ENST00000444609 IGSF1Q8N6C5 1336 aa15.36■□□□□ 0.05
HDAC8-215ENST00000444609 PLEKHG3A1L390 1219 aa15.35■□□□□ 0.05
HDAC8-215ENST00000444609 KCNQ4P56696 695 aa15.35■□□□□ 0.05
HDAC8-215ENST00000444609 CCDC61Q9Y6R9 512 aa15.33■□□□□ 0.04
HDAC8-215ENST00000444609 CSB-PGBD3P0DP91 1061 aa15.32■□□□□ 0.04
HDAC8-215ENST00000444609 CCDC7Q96M83 1385 aa15.3■□□□□ 0.04
HDAC8-215ENST00000444609 CDK19Q9BWU1 502 aa15.3■□□□□ 0.04
HDAC8-215ENST00000444609 WNK3Q9BYP7 1800 aa15.3■□□□□ 0.04
HDAC8-215ENST00000444609 NLRP6P59044 892 aa15.29■□□□□ 0.04
HDAC8-215ENST00000444609 BTAF1O14981 1849 aa15.29■□□□□ 0.04
HDAC8-215ENST00000444609 PPIP5K1Q6PFW1 1433 aa15.28■□□□□ 0.04
HDAC8-215ENST00000444609 SMC1BQ8NDV3 1235 aa15.28■□□□□ 0.04
HDAC8-215ENST00000444609 PRDM10Q9NQV6 1147 aa15.28■□□□□ 0.04
HDAC8-215ENST00000444609 CICQ96RK0 1608 aaPredicted RBP15.28■□□□□ 0.04
HDAC8-215ENST00000444609 ARHGEF25Q86VW2 580 aa15.27■□□□□ 0.04
HDAC8-215ENST00000444609 ADGRB1O14514 1584 aa15.27■□□□□ 0.03
HDAC8-215ENST00000444609 ABCC6O95255 1503 aa15.27■□□□□ 0.03
HDAC8-215ENST00000444609 COL18A1P39060 1754 aa15.26■□□□□ 0.03
HDAC8-215ENST00000444609 MLLT1Q03111 559 aaPredicted RBP15.26■□□□□ 0.03
HDAC8-215ENST00000444609 ITSN1Q15811 1721 aa15.26■□□□□ 0.03
HDAC8-215ENST00000444609 TRPM1Q7Z4N2 1603 aa15.25■□□□□ 0.03
HDAC8-215ENST00000444609 TUBGCP6Q96RT7 1819 aa15.25■□□□□ 0.03
HDAC8-215ENST00000444609 SLIT3O75094 1523 aa15.25■□□□□ 0.03
HDAC8-215ENST00000444609 RRAGCQ9HB90 399 aa15.24■□□□□ 0.03
HDAC8-215ENST00000444609 CCNL1Q9UK58 526 aaPredicted RBP15.24■□□□□ 0.03
HDAC8-215ENST00000444609 CPSF1Q10570 1443 aaKnown RBP15.24■□□□□ 0.03
HDAC8-215ENST00000444609 C10orf71Q711Q0 1435 aa15.24■□□□□ 0.03
HDAC8-215ENST00000444609 IL2RBP14784 551 aa15.23■□□□□ 0.03
HDAC8-215ENST00000444609 RGS19P49795 217 aa15.23■□□□□ 0.03
HDAC8-215ENST00000444609 KDM2BQ8NHM5 1336 aa15.22■□□□□ 0.03
HDAC8-215ENST00000444609 FOXN1O15353 648 aa15.22■□□□□ 0.03
HDAC8-215ENST00000444609 ARHGAP27Q6ZUM4 889 aa15.22■□□□□ 0.03
HDAC8-215ENST00000444609 FLAD1Q8NFF5 587 aa15.22■□□□□ 0.03
HDAC8-215ENST00000444609 ABHD8Q96I13 439 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms