RNA–Protein interactions for RNA: ENST00000444278.2

DEF6-202, Transcript of DEF6, guanine nucleotide exchange factor, humanhuman

TSL 3

Gene DEF6, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF6-202ENST00000444278 RTL1A6NKG5 1358 aa20.66■□□□□ 0.9
DEF6-202ENST00000444278 SMG6Q86US8 1419 aaKnown RBP20.66■□□□□ 0.9
DEF6-202ENST00000444278 CDK12Q9NYV4 1490 aaPredicted RBP20.66■□□□□ 0.9
DEF6-202ENST00000444278 PHRF1Q9P1Y6 1649 aaKnown RBP20.65■□□□□ 0.9
DEF6-202ENST00000444278 INSRP06213 1382 aa20.65■□□□□ 0.9
DEF6-202ENST00000444278 PNPLA6Q8IY17 1366 aa20.65■□□□□ 0.9
DEF6-202ENST00000444278 PNISRQ8TF01 805 aaKnown RBP20.65■□□□□ 0.9
DEF6-202ENST00000444278 LTN1O94822 1766 aa20.64■□□□□ 0.9
DEF6-202ENST00000444278 NFAT5O94916 1531 aa20.64■□□□□ 0.9
DEF6-202ENST00000444278 UPF1Q92900 1129 aaKnown RBP eCLIP20.64■□□□□ 0.89
DEF6-202ENST00000444278 PNNQ9H307 717 aaKnown RBP20.64■□□□□ 0.89
DEF6-202ENST00000444278 U2SURPO15042 1029 aaKnown RBP20.63■□□□□ 0.89
DEF6-202ENST00000444278 HOXC9P31274 260 aa20.63■□□□□ 0.89
DEF6-202ENST00000444278 PRDM11Q9NQV5 511 aa20.63■□□□□ 0.89
DEF6-202ENST00000444278 COL22A1Q8NFW1 1626 aaPredicted RBP20.62■□□□□ 0.89
DEF6-202ENST00000444278 CPDO75976 1380 aa20.61■□□□□ 0.89
DEF6-202ENST00000444278 HSP90AB2PQ58FF8 381 aa20.61■□□□□ 0.89
DEF6-202ENST00000444278 NEFMP07197 916 aa20.6■□□□□ 0.89
DEF6-202ENST00000444278 U2AF1L5P0DN76 240 aaPredicted RBP20.6■□□□□ 0.89
DEF6-202ENST00000444278 U2AF1Q01081 240 aaKnown RBP eCLIP20.6■□□□□ 0.89
DEF6-202ENST00000444278 CRYBG1Q9Y4K1 1723 aa20.6■□□□□ 0.89
DEF6-202ENST00000444278 KIAA0232Q92628 1395 aa20.59■□□□□ 0.89
DEF6-202ENST00000444278 AFF2P51816 1311 aa20.59■□□□□ 0.89
DEF6-202ENST00000444278 LTV1Q96GA3 475 aaPredicted RBP20.58■□□□□ 0.89
DEF6-202ENST00000444278 BLMP54132 1417 aaPredicted RBP20.58■□□□□ 0.88
DEF6-202ENST00000444278 IL13P35225 146 aa20.57■□□□□ 0.88
DEF6-202ENST00000444278 EIF4A2Q14240 407 aaKnown RBP20.57■□□□□ 0.88
DEF6-202ENST00000444278 ADAMTS8Q9UP79 889 aa20.57■□□□□ 0.88
DEF6-202ENST00000444278 ABCA3Q99758 1704 aa20.56■□□□□ 0.88
DEF6-202ENST00000444278 PEAK1Q9H792 1746 aa20.56■□□□□ 0.88
DEF6-202ENST00000444278 CHRNA2Q15822 529 aa20.56■□□□□ 0.88
DEF6-202ENST00000444278 ABCC6O95255 1503 aa20.56■□□□□ 0.88
DEF6-202ENST00000444278 CSB-PGBD3P0DP91 1061 aa20.55■□□□□ 0.88
DEF6-202ENST00000444278 EVA1CP58658 441 aa20.55■□□□□ 0.88
DEF6-202ENST00000444278 ANKRD24Q8TF21 1146 aa20.55■□□□□ 0.88
DEF6-202ENST00000444278 C8orf37Q96NL8 207 aa20.55■□□□□ 0.88
DEF6-202ENST00000444278 QTRT2Q9H974 415 aaKnown RBP20.55■□□□□ 0.88
DEF6-202ENST00000444278 COL3A1P02461 1466 aaPredicted RBP20.55■□□□□ 0.88
DEF6-202ENST00000444278 ADAMTS2O95450 1211 aa20.54■□□□□ 0.88
DEF6-202ENST00000444278 FCHSD2O94868 740 aa20.53■□□□□ 0.88
DEF6-202ENST00000444278 RBM6P78332 1123 aaKnown RBP20.52■□□□□ 0.88
DEF6-202ENST00000444278 YTHDC1Q96MU7 727 aaKnown RBP20.52■□□□□ 0.88
DEF6-202ENST00000444278 FAM83GA6ND36 823 aa20.51■□□□□ 0.87
DEF6-202ENST00000444278 MAPK8IP3Q9UPT6 1336 aa20.51■□□□□ 0.87
DEF6-202ENST00000444278 RUNDC1Q96C34 613 aa20.5■□□□□ 0.87
DEF6-202ENST00000444278 NGLY1Q96IV0 654 aa20.5■□□□□ 0.87
DEF6-202ENST00000444278 AXIN2Q9Y2T1 843 aa20.5■□□□□ 0.87
DEF6-202ENST00000444278 COL14A1Q05707 1796 aaKnown RBP20.49■□□□□ 0.87
DEF6-202ENST00000444278 RGPD5Q99666 1765 aa20.49■□□□□ 0.87
DEF6-202ENST00000444278 SULT6B1Q6IMI4 303 aa20.49■□□□□ 0.87
DEF6-202ENST00000444278 EYA1Q99502 592 aa20.49■□□□□ 0.87
DEF6-202ENST00000444278 COL18A1P39060 1754 aa20.49■□□□□ 0.87
DEF6-202ENST00000444278 HMOX1P09601 288 aa20.48■□□□□ 0.87
DEF6-202ENST00000444278 NLRP2Q9NX02 1062 aa20.48■□□□□ 0.87
DEF6-202ENST00000444278 BTG4Q9NY30 223 aa20.48■□□□□ 0.87
DEF6-202ENST00000444278 ERBB3P21860 1342 aa20.48■□□□□ 0.87
DEF6-202ENST00000444278 HNRNPUQ00839 825 aaKnown RBP eCLIP20.47■□□□□ 0.87
DEF6-202ENST00000444278 TOM1L2Q6ZVM7 507 aa20.46■□□□□ 0.87
DEF6-202ENST00000444278 CCDC146Q8IYE0 955 aa20.46■□□□□ 0.87
DEF6-202ENST00000444278 STRN4Q9NRL3 753 aa20.46■□□□□ 0.87
DEF6-202ENST00000444278 IGSF1Q8N6C5 1336 aa20.46■□□□□ 0.87
DEF6-202ENST00000444278 NGEFQ8N5V2 710 aa20.45■□□□□ 0.86
DEF6-202ENST00000444278 FAM208AQ9UK61 1670 aaKnown RBP20.45■□□□□ 0.86
DEF6-202ENST00000444278 PRKAR2BP31323 418 aa20.44■□□□□ 0.86
DEF6-202ENST00000444278 RSPH6AQ9H0K4 717 aa20.44■□□□□ 0.86
DEF6-202ENST00000444278 WDR17Q8IZU2 1322 aa20.44■□□□□ 0.86
DEF6-202ENST00000444278 CAMTA1Q9Y6Y1 1673 aa20.43■□□□□ 0.86
DEF6-202ENST00000444278 NBPF6Q5VWK0 638 aa20.43■□□□□ 0.86
DEF6-202ENST00000444278 NBPF4Q96M43 638 aa20.43■□□□□ 0.86
DEF6-202ENST00000444278 LMO7Q8WWI1 1683 aa20.42■□□□□ 0.86
DEF6-202ENST00000444278 USP21Q9UK80 565 aa20.42■□□□□ 0.86
DEF6-202ENST00000444278 RGS12O14924 1447 aa20.42■□□□□ 0.86
DEF6-202ENST00000444278 COL5A2P05997 1499 aaPredicted RBP20.42■□□□□ 0.86
DEF6-202ENST00000444278 RAPGEF4Q8WZA2 1011 aa20.41■□□□□ 0.86
DEF6-202ENST00000444278 RGPD1P0DJD0 1748 aa20.41■□□□□ 0.86
DEF6-202ENST00000444278 APAF1O14727 1248 aa20.4■□□□□ 0.86
DEF6-202ENST00000444278 USHBP1Q8N6Y0 703 aa20.4■□□□□ 0.86
DEF6-202ENST00000444278 CARD10Q9BWT7 1032 aa20.4■□□□□ 0.86
DEF6-202ENST00000444278 TRPC5Q9UL62 973 aaPredicted RBP20.4■□□□□ 0.86
DEF6-202ENST00000444278 TATP17735 454 aaPredicted RBP20.39■□□□□ 0.85
DEF6-202ENST00000444278 AEBP1Q8IUX7 1158 aa20.39■□□□□ 0.85
DEF6-202ENST00000444278 FNBP4Q8N3X1 1017 aaPredicted RBP20.39■□□□□ 0.85
DEF6-202ENST00000444278 TCP11L2Q8N4U5 519 aa20.39■□□□□ 0.85
DEF6-202ENST00000444278 PLEKHF1Q96S99 279 aa20.39■□□□□ 0.85
DEF6-202ENST00000444278 NWD2Q9ULI1 1742 aa20.39■□□□□ 0.85
DEF6-202ENST00000444278 KDRP35968 1356 aa20.38■□□□□ 0.85
DEF6-202ENST00000444278 PLEKHO1Q53GL0 409 aaPredicted RBP20.38■□□□□ 0.85
DEF6-202ENST00000444278 LARP1Q6PKG0 1096 aaKnown RBP20.38■□□□□ 0.85
DEF6-202ENST00000444278 CCDC9Q9Y3X0 531 aaKnown RBP20.38■□□□□ 0.85
DEF6-202ENST00000444278 RGPD2P0DJD1 1756 aa20.38■□□□□ 0.85
DEF6-202ENST00000444278 PLCH1Q4KWH8 1693 aa20.38■□□□□ 0.85
DEF6-202ENST00000444278 CRB1P82279 1406 aa20.37■□□□□ 0.85
DEF6-202ENST00000444278 AMOTQ4VCS5 1084 aa20.37■□□□□ 0.85
DEF6-202ENST00000444278 UNC5CLQ8IV45 518 aa20.37■□□□□ 0.85
DEF6-202ENST00000444278 GAS2L2Q8NHY3 880 aa20.37■□□□□ 0.85
DEF6-202ENST00000444278 SALL2Q9Y467 1007 aaPredicted RBP20.37■□□□□ 0.85
DEF6-202ENST00000444278 NEUROD2Q15784 382 aa20.36■□□□□ 0.85
DEF6-202ENST00000444278 NCBP3Q53F19 620 aaKnown RBP20.36■□□□□ 0.85
DEF6-202ENST00000444278 LMOD3Q0VAK6 560 aa20.35■□□□□ 0.85
DEF6-202ENST00000444278 NFE2L2Q16236 605 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms