RNA–Protein interactions for RNA: ENST00000443722.5

PMPCB-203, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-203ENST00000443722 CCER1Q8TC90 406 aaPredicted RBP18.61■□□□□ 0.57
PMPCB-203ENST00000443722 PUS7Q96PZ0 661 aaKnown RBP18.61■□□□□ 0.57
PMPCB-203ENST00000443722 EDC4Q6P2E9 1401 aaKnown RBP18.61■□□□□ 0.57
PMPCB-203ENST00000443722 USP31Q70CQ4 1352 aa18.6■□□□□ 0.57
PMPCB-203ENST00000443722 WDR17Q8IZU2 1322 aa18.6■□□□□ 0.57
PMPCB-203ENST00000443722 BAG6P46379 1132 aa18.6■□□□□ 0.57
PMPCB-203ENST00000443722 FAM196AQ6ZSG2 479 aa18.6■□□□□ 0.57
PMPCB-203ENST00000443722 THRAP3Q9Y2W1 955 aaKnown RBP18.6■□□□□ 0.57
PMPCB-203ENST00000443722 COL18A1P39060 1754 aa18.6■□□□□ 0.57
PMPCB-203ENST00000443722 TMF1P82094 1093 aa18.59■□□□□ 0.57
PMPCB-203ENST00000443722 FBLN1P23142 703 aa18.58■□□□□ 0.57
PMPCB-203ENST00000443722 CLSPNQ9HAW4 1339 aa18.57■□□□□ 0.56
PMPCB-203ENST00000443722 EZH2Q15910 746 aaKnown RBP18.56■□□□□ 0.56
PMPCB-203ENST00000443722 TIMELESSQ9UNS1 1208 aa18.56■□□□□ 0.56
PMPCB-203ENST00000443722 PSDA5PKW4 1024 aaPredicted RBP18.55■□□□□ 0.56
PMPCB-203ENST00000443722 APBA3O96018 575 aa18.55■□□□□ 0.56
PMPCB-203ENST00000443722 OVOS2A0A0J9YW53 1432 aa18.55■□□□□ 0.56
PMPCB-203ENST00000443722 OVOS2Q6IE36 1432 aa18.55■□□□□ 0.56
PMPCB-203ENST00000443722 DDB1Q16531 1140 aa18.54■□□□□ 0.56
PMPCB-203ENST00000443722 CARD10Q9BWT7 1032 aa18.54■□□□□ 0.56
PMPCB-203ENST00000443722 NINLQ9Y2I6 1382 aa18.54■□□□□ 0.56
PMPCB-203ENST00000443722 SLC24A1O60721 1099 aa18.53■□□□□ 0.56
PMPCB-203ENST00000443722 NLRP2Q9NX02 1062 aa18.53■□□□□ 0.56
PMPCB-203ENST00000443722 RGPD5Q99666 1765 aa18.53■□□□□ 0.56
PMPCB-203ENST00000443722 ANKRD36BQ8N2N9 1353 aa18.52■□□□□ 0.56
PMPCB-203ENST00000443722 COG3Q96JB2 828 aa18.52■□□□□ 0.56
PMPCB-203ENST00000443722 PTF1AQ7RTS3 328 aa18.51■□□□□ 0.55
PMPCB-203ENST00000443722 MARCH10Q8NA82 808 aaPredicted RBP18.51■□□□□ 0.55
PMPCB-203ENST00000443722 ANKRD24Q8TF21 1146 aa18.51■□□□□ 0.55
PMPCB-203ENST00000443722 LTV1Q96GA3 475 aaPredicted RBP18.51■□□□□ 0.55
PMPCB-203ENST00000443722 CAMKK2Q96RR4 588 aa18.51■□□□□ 0.55
PMPCB-203ENST00000443722 GGNBP2Q9H3C7 697 aa18.51■□□□□ 0.55
PMPCB-203ENST00000443722 ERBB3P21860 1342 aa18.51■□□□□ 0.55
PMPCB-203ENST00000443722 RGPD1P0DJD0 1748 aa18.51■□□□□ 0.55
PMPCB-203ENST00000443722 POLR3GLQ9BT43 218 aa18.5■□□□□ 0.55
PMPCB-203ENST00000443722 TNS1Q9HBL0 1735 aaKnown RBP18.5■□□□□ 0.55
PMPCB-203ENST00000443722 PARP4Q9UKK3 1724 aaKnown RBP18.5■□□□□ 0.55
PMPCB-203ENST00000443722 FYB1O15117 783 aa18.49■□□□□ 0.55
PMPCB-203ENST00000443722 LRRC37A3O60309 1634 aa18.49■□□□□ 0.55
PMPCB-203ENST00000443722 USP54Q70EL1 1684 aa18.49■□□□□ 0.55
PMPCB-203ENST00000443722 DISP2A7MBM2 1401 aa18.49■□□□□ 0.55
PMPCB-203ENST00000443722 R3HDM1Q15032 1099 aaKnown RBP18.49■□□□□ 0.55
PMPCB-203ENST00000443722 MAP3K19Q56UN5 1328 aa18.48■□□□□ 0.55
PMPCB-203ENST00000443722 OVOS2A0A0G2JMS6 1433 aa18.48■□□□□ 0.55
PMPCB-203ENST00000443722 RRS1Q15050 365 aaKnown RBP18.48■□□□□ 0.55
PMPCB-203ENST00000443722 CDCA8Q53HL2 280 aa18.48■□□□□ 0.55
PMPCB-203ENST00000443722 IP6K1Q92551 441 aa18.48■□□□□ 0.55
PMPCB-203ENST00000443722 CARD14Q9BXL6 1004 aa18.48■□□□□ 0.55
PMPCB-203ENST00000443722 CDCA7Q9BWT1 371 aaPredicted RBP18.47■□□□□ 0.55
PMPCB-203ENST00000443722 LTN1O94822 1766 aa18.46■□□□□ 0.55
PMPCB-203ENST00000443722 CCDC7Q96M83 1385 aa18.46■□□□□ 0.55
PMPCB-203ENST00000443722 EXOC5O00471 708 aa18.46■□□□□ 0.55
PMPCB-203ENST00000443722 ABCC6O95255 1503 aa18.45■□□□□ 0.54
PMPCB-203ENST00000443722 HSPA5P11021 654 aaKnown RBP18.45■□□□□ 0.54
PMPCB-203ENST00000443722 HOXC9P31274 260 aa18.45■□□□□ 0.54
PMPCB-203ENST00000443722 AMPHP49418 695 aa18.45■□□□□ 0.54
PMPCB-203ENST00000443722 PEAK1Q9H792 1746 aa18.44■□□□□ 0.54
PMPCB-203ENST00000443722 IL2RBP14784 551 aa18.43■□□□□ 0.54
PMPCB-203ENST00000443722 KCNQ2O43526 872 aa18.42■□□□□ 0.54
PMPCB-203ENST00000443722 EIF4G2P78344 907 aaKnown RBP eCLIP18.42■□□□□ 0.54
PMPCB-203ENST00000443722 NSD3Q9BZ95 1437 aa18.42■□□□□ 0.54
PMPCB-203ENST00000443722 ACSBG1Q96GR2 724 aa18.41■□□□□ 0.54
PMPCB-203ENST00000443722 BCL11BQ9C0K0 894 aaPredicted RBP18.41■□□□□ 0.54
PMPCB-203ENST00000443722 WNK3Q9BYP7 1800 aa18.41■□□□□ 0.54
PMPCB-203ENST00000443722 TNS2Q63HR2 1409 aa18.4■□□□□ 0.54
PMPCB-203ENST00000443722 C11orf95C9JLR9 678 aaPredicted RBP18.39■□□□□ 0.53
PMPCB-203ENST00000443722 USHBP1Q8N6Y0 703 aa18.39■□□□□ 0.53
PMPCB-203ENST00000443722 MYOM1P52179 1685 aa18.39■□□□□ 0.53
PMPCB-203ENST00000443722 PARD3Q8TEW0 1356 aa18.38■□□□□ 0.53
PMPCB-203ENST00000443722 HSP90AB2PQ58FF8 381 aa18.38■□□□□ 0.53
PMPCB-203ENST00000443722 DDX54Q8TDD1 881 aaKnown RBP18.37■□□□□ 0.53
PMPCB-203ENST00000443722 NBPF6Q5VWK0 638 aa18.36■□□□□ 0.53
PMPCB-203ENST00000443722 PROM2Q8N271 834 aa18.36■□□□□ 0.53
PMPCB-203ENST00000443722 NBPF4Q96M43 638 aa18.36■□□□□ 0.53
PMPCB-203ENST00000443722 EMILIN1Q9Y6C2 1016 aa18.36■□□□□ 0.53
PMPCB-203ENST00000443722 PLSCR1O15162 318 aa18.35■□□□□ 0.53
PMPCB-203ENST00000443722 PPM1GO15355 546 aaPredicted RBP18.35■□□□□ 0.53
PMPCB-203ENST00000443722 BCL9O00512 1426 aa18.35■□□□□ 0.53
PMPCB-203ENST00000443722 NBPF14Q5TI25 921 aa18.34■□□□□ 0.53
PMPCB-203ENST00000443722 SBF2Q86WG5 1849 aa18.34■□□□□ 0.53
PMPCB-203ENST00000443722 TNNT2P45379 298 aaPredicted RBP18.33■□□□□ 0.53
PMPCB-203ENST00000443722 ANO8Q9HCE9 1232 aaPredicted RBP18.33■□□□□ 0.53
PMPCB-203ENST00000443722 RTL1A6NKG5 1358 aa18.33■□□□□ 0.52
PMPCB-203ENST00000443722 RREB1Q92766 1687 aa18.33■□□□□ 0.52
PMPCB-203ENST00000443722 NUP188Q5SRE5 1749 aa18.32■□□□□ 0.52
PMPCB-203ENST00000443722 PANK3Q9H999 370 aa18.32■□□□□ 0.52
PMPCB-203ENST00000443722 CGNL1Q0VF96 1302 aa18.32■□□□□ 0.52
PMPCB-203ENST00000443722 KIF20BQ96Q89 1820 aa18.31■□□□□ 0.52
PMPCB-203ENST00000443722 TXNRD1Q16881 649 aa18.31■□□□□ 0.52
PMPCB-203ENST00000443722 MEGF6O75095 1541 aa18.31■□□□□ 0.52
PMPCB-203ENST00000443722 FLT4P35916 1363 aa18.3■□□□□ 0.52
PMPCB-203ENST00000443722 RGPD2P0DJD1 1756 aa18.3■□□□□ 0.52
PMPCB-203ENST00000443722 ZCRB1Q8TBF4 217 aaKnown RBP18.29■□□□□ 0.52
PMPCB-203ENST00000443722 PDGFDQ9GZP0 370 aaPredicted RBP18.29■□□□□ 0.52
PMPCB-203ENST00000443722 INSRP06213 1382 aa18.29■□□□□ 0.52
PMPCB-203ENST00000443722 SYTL4Q96C24 671 aaPredicted RBP18.28■□□□□ 0.52
PMPCB-203ENST00000443722 FAM208AQ9UK61 1670 aaKnown RBP18.28■□□□□ 0.52
PMPCB-203ENST00000443722 SMG6Q86US8 1419 aaKnown RBP18.28■□□□□ 0.52
PMPCB-203ENST00000443722 PRIM1P49642 420 aaKnown RBP18.26■□□□□ 0.51
PMPCB-203ENST00000443722 RAPGEF4Q8WZA2 1011 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms