RNA–Protein interactions for RNA: ENST00000442421.5

TRIM13-205, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-205ENST00000442421 TOM1L2Q6ZVM7 507 aa18.54■□□□□ 0.56
TRIM13-205ENST00000442421 PTF1AQ7RTS3 328 aa18.54■□□□□ 0.56
TRIM13-205ENST00000442421 ANO8Q9HCE9 1232 aaPredicted RBP18.53■□□□□ 0.56
TRIM13-205ENST00000442421 NINLQ9Y2I6 1382 aa18.53■□□□□ 0.56
TRIM13-205ENST00000442421 PLSCR1O15162 318 aa18.52■□□□□ 0.56
TRIM13-205ENST00000442421 AXIN2Q9Y2T1 843 aa18.52■□□□□ 0.56
TRIM13-205ENST00000442421 MYOM1P52179 1685 aa18.51■□□□□ 0.55
TRIM13-205ENST00000442421 CPSF1Q10570 1443 aaKnown RBP18.51■□□□□ 0.55
TRIM13-205ENST00000442421 TRPM1Q7Z4N2 1603 aa18.51■□□□□ 0.55
TRIM13-205ENST00000442421 UTRNP46939 3433 aa18.51■□□□□ 0.55
TRIM13-205ENST00000442421 WDR17Q8IZU2 1322 aa18.5■□□□□ 0.55
TRIM13-205ENST00000442421 MARCH10Q8NA82 808 aaPredicted RBP18.5■□□□□ 0.55
TRIM13-205ENST00000442421 BCL11BQ9C0K0 894 aaPredicted RBP18.5■□□□□ 0.55
TRIM13-205ENST00000442421 PDGFDQ9GZP0 370 aaPredicted RBP18.49■□□□□ 0.55
TRIM13-205ENST00000442421 SOX12O15370 315 aa18.48■□□□□ 0.55
TRIM13-205ENST00000442421 DCAF8L1A6NGE4 600 aa18.47■□□□□ 0.55
TRIM13-205ENST00000442421 PROM2Q8N271 834 aa18.47■□□□□ 0.55
TRIM13-205ENST00000442421 EVC2Q86UK5 1308 aa18.47■□□□□ 0.55
TRIM13-205ENST00000442421 KAT6BQ8WYB5 2073 aa18.46■□□□□ 0.55
TRIM13-205ENST00000442421 NFAT5O94916 1531 aa18.46■□□□□ 0.55
TRIM13-205ENST00000442421 ZBTB7AO95365 584 aa18.46■□□□□ 0.55
TRIM13-205ENST00000442421 ARHGEF25Q86VW2 580 aa18.46■□□□□ 0.55
TRIM13-205ENST00000442421 BCL9O00512 1426 aa18.46■□□□□ 0.55
TRIM13-205ENST00000442421 TTC21BQ7Z4L5 1316 aa18.46■□□□□ 0.55
TRIM13-205ENST00000442421 CDCA7Q9BWT1 371 aaPredicted RBP18.45■□□□□ 0.54
TRIM13-205ENST00000442421 MON2Q7Z3U7 1717 aa18.45■□□□□ 0.54
TRIM13-205ENST00000442421 CSB-PGBD3P0DP91 1061 aa18.44■□□□□ 0.54
TRIM13-205ENST00000442421 LTN1O94822 1766 aa18.44■□□□□ 0.54
TRIM13-205ENST00000442421 NHSQ6T4R5 1651 aa18.44■□□□□ 0.54
TRIM13-205ENST00000442421 KCNH5Q8NCM2 988 aa18.43■□□□□ 0.54
TRIM13-205ENST00000442421 L3MBTL2Q969R5 705 aa18.43■□□□□ 0.54
TRIM13-205ENST00000442421 CARD10Q9BWT7 1032 aa18.43■□□□□ 0.54
TRIM13-205ENST00000442421 TXNRD1Q16881 649 aa18.42■□□□□ 0.54
TRIM13-205ENST00000442421 ATF5Q9Y2D1 282 aaPredicted RBP18.42■□□□□ 0.54
TRIM13-205ENST00000442421 TNS2Q63HR2 1409 aa18.41■□□□□ 0.54
TRIM13-205ENST00000442421 CHD4Q14839 1912 aa18.41■□□□□ 0.54
TRIM13-205ENST00000442421 PTGER2P43116 358 aa18.41■□□□□ 0.54
TRIM13-205ENST00000442421 ZNF692Q9BU19 519 aaPredicted RBP18.41■□□□□ 0.54
TRIM13-205ENST00000442421 BTAF1O14981 1849 aa18.4■□□□□ 0.54
TRIM13-205ENST00000442421 ABCC6O95255 1503 aa18.4■□□□□ 0.54
TRIM13-205ENST00000442421 EXOC5O00471 708 aa18.4■□□□□ 0.54
TRIM13-205ENST00000442421 STK32BQ9NY57 414 aa18.4■□□□□ 0.54
TRIM13-205ENST00000442421 TTC21AQ8NDW8 1320 aa18.4■□□□□ 0.54
TRIM13-205ENST00000442421 USP54Q70EL1 1684 aa18.39■□□□□ 0.53
TRIM13-205ENST00000442421 KTN1Q86UP2 1357 aaKnown RBP18.39■□□□□ 0.53
TRIM13-205ENST00000442421 CCDC7Q96M83 1385 aa18.39■□□□□ 0.53
TRIM13-205ENST00000442421 SLC15A2Q16348 729 aa18.38■□□□□ 0.53
TRIM13-205ENST00000442421 ROCK2O75116 1388 aaKnown RBP18.38■□□□□ 0.53
TRIM13-205ENST00000442421 PAPPAQ13219 1627 aa18.38■□□□□ 0.53
TRIM13-205ENST00000442421 ACSBG1Q96GR2 724 aa18.36■□□□□ 0.53
TRIM13-205ENST00000442421 SIN3AQ96ST3 1273 aa18.35■□□□□ 0.53
TRIM13-205ENST00000442421 FHDC1Q9C0D6 1143 aaPredicted RBP18.35■□□□□ 0.53
TRIM13-205ENST00000442421 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.34■□□□□ 0.53
TRIM13-205ENST00000442421 MTFR1LQ9H019 292 aa18.34■□□□□ 0.53
TRIM13-205ENST00000442421 SYT17Q9BSW7 474 aa18.33■□□□□ 0.52
TRIM13-205ENST00000442421 ERBB3P21860 1342 aa18.32■□□□□ 0.52
TRIM13-205ENST00000442421 SGIP1Q9BQI5 828 aa18.32■□□□□ 0.52
TRIM13-205ENST00000442421 NLRP2Q9NX02 1062 aa18.32■□□□□ 0.52
TRIM13-205ENST00000442421 CD163L1Q9NR16 1453 aa18.32■□□□□ 0.52
TRIM13-205ENST00000442421 USP31Q70CQ4 1352 aa18.31■□□□□ 0.52
TRIM13-205ENST00000442421 GOLGB1Q14789 3259 aaKnown RBP18.31■□□□□ 0.52
TRIM13-205ENST00000442421 NEUROD1Q13562 356 aa18.31■□□□□ 0.52
TRIM13-205ENST00000442421 NME9Q86XW9 330 aa18.31■□□□□ 0.52
TRIM13-205ENST00000442421 ZNF784Q8NCA9 323 aaPredicted RBP18.31■□□□□ 0.52
TRIM13-205ENST00000442421 TUBGCP6Q96RT7 1819 aa18.3■□□□□ 0.52
TRIM13-205ENST00000442421 SBNO2Q9Y2G9 1366 aa18.3■□□□□ 0.52
TRIM13-205ENST00000442421 IL2RBP14784 551 aa18.29■□□□□ 0.52
TRIM13-205ENST00000442421 QSER1Q2KHR3 1735 aa18.29■□□□□ 0.52
TRIM13-205ENST00000442421 ZNF827Q17R98 1081 aa18.28■□□□□ 0.52
TRIM13-205ENST00000442421 ANKRD24Q8TF21 1146 aa18.28■□□□□ 0.52
TRIM13-205ENST00000442421 ARXQ96QS3 562 aa18.27■□□□□ 0.52
TRIM13-205ENST00000442421 FAM208AQ9UK61 1670 aaKnown RBP18.27■□□□□ 0.52
TRIM13-205ENST00000442421 RGPD2P0DJD1 1756 aa18.27■□□□□ 0.51
TRIM13-205ENST00000442421 TMC1Q8TDI8 760 aa18.26■□□□□ 0.51
TRIM13-205ENST00000442421 LRRC4BQ9NT99 713 aa18.26■□□□□ 0.51
TRIM13-205ENST00000442421 COL24A1Q17RW2 1714 aa18.25■□□□□ 0.51
TRIM13-205ENST00000442421 DOT1LQ8TEK3 1739 aa18.25■□□□□ 0.51
TRIM13-205ENST00000442421 EDC4Q6P2E9 1401 aaKnown RBP18.23■□□□□ 0.51
TRIM13-205ENST00000442421 SHANK3Q9BYB0 1731 aa18.23■□□□□ 0.51
TRIM13-205ENST00000442421 MAP3K5Q99683 1374 aa18.23■□□□□ 0.51
TRIM13-205ENST00000442421 HDGFL2Q7Z4V5 671 aaPredicted RBP18.23■□□□□ 0.51
TRIM13-205ENST00000442421 SLC12A5Q9H2X9 1139 aa18.23■□□□□ 0.51
TRIM13-205ENST00000442421 LY75O60449 1722 aa18.22■□□□□ 0.51
TRIM13-205ENST00000442421 A0A1W2PP64 1363 aa18.21■□□□□ 0.51
TRIM13-205ENST00000442421 DDX54Q8TDD1 881 aaKnown RBP18.21■□□□□ 0.51
TRIM13-205ENST00000442421 CARD11Q9BXL7 1154 aa18.21■□□□□ 0.51
TRIM13-205ENST00000442421 KLHL34Q8N239 644 aa18.2■□□□□ 0.5
TRIM13-205ENST00000442421 AKT1S1Q96B36 256 aa18.2■□□□□ 0.5
TRIM13-205ENST00000442421 LTV1Q96GA3 475 aaPredicted RBP18.2■□□□□ 0.5
TRIM13-205ENST00000442421 KCNQ4P56696 695 aa18.18■□□□□ 0.5
TRIM13-205ENST00000442421 GPR162Q16538 588 aa18.18■□□□□ 0.5
TRIM13-205ENST00000442421 IP6K1Q92551 441 aa18.18■□□□□ 0.5
TRIM13-205ENST00000442421 TERF2IPQ9NYB0 399 aa18.18■□□□□ 0.5
TRIM13-205ENST00000442421 PNPLA7Q6ZV29 1317 aa18.18■□□□□ 0.5
TRIM13-205ENST00000442421 SENP3-EIF4A1A0A087X0R7 540 aa18.17■□□□□ 0.5
TRIM13-205ENST00000442421 SLC27A3Q5K4L6 730 aa18.17■□□□□ 0.5
TRIM13-205ENST00000442421 SYTL4Q96C24 671 aaPredicted RBP18.16■□□□□ 0.5
TRIM13-205ENST00000442421 POLD1P28340 1107 aa18.15■□□□□ 0.5
TRIM13-205ENST00000442421 C1QTNF8P60827 252 aa18.15■□□□□ 0.5
TRIM13-205ENST00000442421 PELP1Q8IZL8 1130 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms