RNA–Protein interactions for RNA: ENST00000442387.2

GACAT3-202, gastric cancer associated transcript 3, humanhuman

TSL 3

Gene GACAT3, Length 472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-202ENST00000442387 ZNF692Q9BU19 519 aaPredicted RBP15.77■□□□□ 0.12
GACAT3-202ENST00000442387 CDCA7Q9BWT1 371 aaPredicted RBP15.77■□□□□ 0.12
GACAT3-202ENST00000442387 ARHGEF25Q86VW2 580 aa15.76■□□□□ 0.11
GACAT3-202ENST00000442387 BCL11BQ9C0K0 894 aaPredicted RBP15.76■□□□□ 0.11
GACAT3-202ENST00000442387 CSB-PGBD3P0DP91 1061 aa15.75■□□□□ 0.11
GACAT3-202ENST00000442387 TRPM1Q7Z4N2 1603 aa15.75■□□□□ 0.11
GACAT3-202ENST00000442387 ROCK2O75116 1388 aaKnown RBP15.75■□□□□ 0.11
GACAT3-202ENST00000442387 TTC21AQ8NDW8 1320 aa15.74■□□□□ 0.11
GACAT3-202ENST00000442387 SOX12O15370 315 aa15.74■□□□□ 0.11
GACAT3-202ENST00000442387 MARCH10Q8NA82 808 aaPredicted RBP15.74■□□□□ 0.11
GACAT3-202ENST00000442387 RGPD3A6NKT7 1758 aaPredicted RBP15.73■□□□□ 0.11
GACAT3-202ENST00000442387 COL18A1P39060 1754 aa15.73■□□□□ 0.11
GACAT3-202ENST00000442387 RGPD4Q7Z3J3 1758 aa15.73■□□□□ 0.11
GACAT3-202ENST00000442387 YY1P25490 414 aa15.73■□□□□ 0.11
GACAT3-202ENST00000442387 PTF1AQ7RTS3 328 aa15.73■□□□□ 0.11
GACAT3-202ENST00000442387 CARD10Q9BWT7 1032 aa15.73■□□□□ 0.11
GACAT3-202ENST00000442387 ANO8Q9HCE9 1232 aaPredicted RBP15.73■□□□□ 0.11
GACAT3-202ENST00000442387 BCL9O00512 1426 aa15.73■□□□□ 0.11
GACAT3-202ENST00000442387 NINLQ9Y2I6 1382 aa15.73■□□□□ 0.11
GACAT3-202ENST00000442387 DCAF8L1A6NGE4 600 aa15.72■□□□□ 0.11
GACAT3-202ENST00000442387 SIN3AQ96ST3 1273 aa15.72■□□□□ 0.11
GACAT3-202ENST00000442387 KTN1Q86UP2 1357 aaKnown RBP15.71■□□□□ 0.11
GACAT3-202ENST00000442387 EXOC5O00471 708 aa15.7■□□□□ 0.1
GACAT3-202ENST00000442387 NEUROD1Q13562 356 aa15.7■□□□□ 0.1
GACAT3-202ENST00000442387 PROM2Q8N271 834 aa15.7■□□□□ 0.1
GACAT3-202ENST00000442387 CCDC7Q96M83 1385 aa15.7■□□□□ 0.1
GACAT3-202ENST00000442387 NFAT5O94916 1531 aa15.69■□□□□ 0.1
GACAT3-202ENST00000442387 WNK3Q9BYP7 1800 aa15.69■□□□□ 0.1
GACAT3-202ENST00000442387 TXNRD1Q16881 649 aa15.68■□□□□ 0.1
GACAT3-202ENST00000442387 SBF2Q86WG5 1849 aa15.68■□□□□ 0.1
GACAT3-202ENST00000442387 ABCC6O95255 1503 aa15.68■□□□□ 0.1
GACAT3-202ENST00000442387 AKAP12Q02952 1782 aa15.67■□□□□ 0.1
GACAT3-202ENST00000442387 PDGFDQ9GZP0 370 aaPredicted RBP15.67■□□□□ 0.1
GACAT3-202ENST00000442387 STK32BQ9NY57 414 aa15.67■□□□□ 0.1
GACAT3-202ENST00000442387 TNS2Q63HR2 1409 aa15.67■□□□□ 0.1
GACAT3-202ENST00000442387 ZBTB7AO95365 584 aa15.66■□□□□ 0.1
GACAT3-202ENST00000442387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.66■□□□□ 0.1
GACAT3-202ENST00000442387 CASZ1Q86V15 1759 aa15.66■□□□□ 0.1
GACAT3-202ENST00000442387 USP31Q70CQ4 1352 aa15.65■□□□□ 0.1
GACAT3-202ENST00000442387 SBNO2Q9Y2G9 1366 aa15.65■□□□□ 0.1
GACAT3-202ENST00000442387 SLC15A2Q16348 729 aa15.65■□□□□ 0.1
GACAT3-202ENST00000442387 NLRP2Q9NX02 1062 aa15.64■□□□□ 0.09
GACAT3-202ENST00000442387 ERBB3P21860 1342 aa15.64■□□□□ 0.09
GACAT3-202ENST00000442387 PTGER2P43116 358 aa15.63■□□□□ 0.09
GACAT3-202ENST00000442387 NME9Q86XW9 330 aa15.63■□□□□ 0.09
GACAT3-202ENST00000442387 ATF5Q9Y2D1 282 aaPredicted RBP15.63■□□□□ 0.09
GACAT3-202ENST00000442387 RGPD5Q99666 1765 aa15.62■□□□□ 0.09
GACAT3-202ENST00000442387 IL2RBP14784 551 aa15.62■□□□□ 0.09
GACAT3-202ENST00000442387 HDGFL2Q7Z4V5 671 aaPredicted RBP15.62■□□□□ 0.09
GACAT3-202ENST00000442387 TMC1Q8TDI8 760 aa15.62■□□□□ 0.09
GACAT3-202ENST00000442387 ACSBG1Q96GR2 724 aa15.62■□□□□ 0.09
GACAT3-202ENST00000442387 CARD11Q9BXL7 1154 aa15.62■□□□□ 0.09
GACAT3-202ENST00000442387 CD163L1Q9NR16 1453 aa15.62■□□□□ 0.09
GACAT3-202ENST00000442387 MON2Q7Z3U7 1717 aa15.62■□□□□ 0.09
GACAT3-202ENST00000442387 ANKRD24Q8TF21 1146 aa15.6■□□□□ 0.09
GACAT3-202ENST00000442387 MTFR1LQ9H019 292 aa15.6■□□□□ 0.09
GACAT3-202ENST00000442387 NHSQ6T4R5 1651 aa15.6■□□□□ 0.09
GACAT3-202ENST00000442387 SLC12A5Q9H2X9 1139 aa15.59■□□□□ 0.09
GACAT3-202ENST00000442387 MYOM1P52179 1685 aa15.59■□□□□ 0.09
GACAT3-202ENST00000442387 USP54Q70EL1 1684 aa15.59■□□□□ 0.09
GACAT3-202ENST00000442387 EDC4Q6P2E9 1401 aaKnown RBP15.59■□□□□ 0.09
GACAT3-202ENST00000442387 FHDC1Q9C0D6 1143 aaPredicted RBP15.58■□□□□ 0.08
GACAT3-202ENST00000442387 TERF2IPQ9NYB0 399 aa15.58■□□□□ 0.08
GACAT3-202ENST00000442387 SYT17Q9BSW7 474 aa15.57■□□□□ 0.08
GACAT3-202ENST00000442387 SGIP1Q9BQI5 828 aa15.56■□□□□ 0.08
GACAT3-202ENST00000442387 A0A1W2PP64 1363 aa15.56■□□□□ 0.08
GACAT3-202ENST00000442387 PUS7Q96PZ0 661 aaKnown RBP15.55■□□□□ 0.08
GACAT3-202ENST00000442387 PAPPAQ13219 1627 aa15.54■□□□□ 0.08
GACAT3-202ENST00000442387 IP6K1Q92551 441 aa15.54■□□□□ 0.08
GACAT3-202ENST00000442387 LTN1O94822 1766 aa15.54■□□□□ 0.08
GACAT3-202ENST00000442387 TONSLQ96HA7 1378 aa15.53■□□□□ 0.08
GACAT3-202ENST00000442387 ZNF827Q17R98 1081 aa15.53■□□□□ 0.08
GACAT3-202ENST00000442387 ARXQ96QS3 562 aa15.53■□□□□ 0.08
GACAT3-202ENST00000442387 DDX54Q8TDD1 881 aaKnown RBP15.52■□□□□ 0.08
GACAT3-202ENST00000442387 LTV1Q96GA3 475 aaPredicted RBP15.52■□□□□ 0.08
GACAT3-202ENST00000442387 LRRC4BQ9NT99 713 aa15.52■□□□□ 0.08
GACAT3-202ENST00000442387 UTRNP46939 3433 aa15.5■□□□□ 0.07
GACAT3-202ENST00000442387 SLC27A3Q5K4L6 730 aa15.5■□□□□ 0.07
GACAT3-202ENST00000442387 ZNF784Q8NCA9 323 aaPredicted RBP15.5■□□□□ 0.07
GACAT3-202ENST00000442387 COG3Q96JB2 828 aa15.5■□□□□ 0.07
GACAT3-202ENST00000442387 BTAF1O14981 1849 aa15.5■□□□□ 0.07
GACAT3-202ENST00000442387 MAP3K5Q99683 1374 aa15.49■□□□□ 0.07
GACAT3-202ENST00000442387 AKT1S1Q96B36 256 aa15.49■□□□□ 0.07
GACAT3-202ENST00000442387 MAP3K19Q56UN5 1328 aa15.48■□□□□ 0.07
GACAT3-202ENST00000442387 HOXC9P31274 260 aa15.48■□□□□ 0.07
GACAT3-202ENST00000442387 AMPHP49418 695 aa15.48■□□□□ 0.07
GACAT3-202ENST00000442387 SLC16A10Q8TF71 515 aa15.48■□□□□ 0.07
GACAT3-202ENST00000442387 SYTL4Q96C24 671 aaPredicted RBP15.48■□□□□ 0.07
GACAT3-202ENST00000442387 POLD1P28340 1107 aa15.47■□□□□ 0.07
GACAT3-202ENST00000442387 TESK2Q96S53 571 aa15.47■□□□□ 0.07
GACAT3-202ENST00000442387 FAM208AQ9UK61 1670 aaKnown RBP15.47■□□□□ 0.07
GACAT3-202ENST00000442387 ANKRD36BQ8N2N9 1353 aa15.47■□□□□ 0.07
GACAT3-202ENST00000442387 ST20-MTHFSA0A0A6YYL1 179 aa15.46■□□□□ 0.07
GACAT3-202ENST00000442387 SLC24A1O60721 1099 aa15.46■□□□□ 0.07
GACAT3-202ENST00000442387 PRIM1P49642 420 aaKnown RBP15.46■□□□□ 0.07
GACAT3-202ENST00000442387 PNPLA7Q6ZV29 1317 aa15.45■□□□□ 0.06
GACAT3-202ENST00000442387 FBLN1P23142 703 aa15.45■□□□□ 0.06
GACAT3-202ENST00000442387 KLHL34Q8N239 644 aa15.45■□□□□ 0.06
GACAT3-202ENST00000442387 ZCRB1Q8TBF4 217 aaKnown RBP15.45■□□□□ 0.06
GACAT3-202ENST00000442387 TFCP2L1Q9NZI6 479 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms