RNA–Protein interactions for RNA: ENST00000441983.5

TRAPPC12-210, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-210ENST00000441983 CDK12Q9NYV4 1490 aaPredicted RBP20.58■□□□□ 0.89
TRAPPC12-210ENST00000441983 UNC5CLQ8IV45 518 aa20.58■□□□□ 0.89
TRAPPC12-210ENST00000441983 ATRNO75882 1429 aa20.58■□□□□ 0.88
TRAPPC12-210ENST00000441983 SOX12O15370 315 aa20.57■□□□□ 0.88
TRAPPC12-210ENST00000441983 BTG4Q9NY30 223 aa20.57■□□□□ 0.88
TRAPPC12-210ENST00000441983 USP21Q9UK80 565 aa20.57■□□□□ 0.88
TRAPPC12-210ENST00000441983 PARD3Q8TEW0 1356 aa20.57■□□□□ 0.88
TRAPPC12-210ENST00000441983 CC2D1BQ5T0F9 858 aaKnown RBP20.56■□□□□ 0.88
TRAPPC12-210ENST00000441983 IP6K1Q92551 441 aa20.56■□□□□ 0.88
TRAPPC12-210ENST00000441983 CHRNA2Q15822 529 aa20.55■□□□□ 0.88
TRAPPC12-210ENST00000441983 INSRP06213 1382 aa20.55■□□□□ 0.88
TRAPPC12-210ENST00000441983 TRPC5Q9UL62 973 aaPredicted RBP20.54■□□□□ 0.88
TRAPPC12-210ENST00000441983 WNK3Q9BYP7 1800 aa20.54■□□□□ 0.88
TRAPPC12-210ENST00000441983 HOXC9P31274 260 aa20.53■□□□□ 0.88
TRAPPC12-210ENST00000441983 AMPHP49418 695 aa20.53■□□□□ 0.88
TRAPPC12-210ENST00000441983 VPS72Q15906 364 aa20.53■□□□□ 0.88
TRAPPC12-210ENST00000441983 CRB1P82279 1406 aa20.53■□□□□ 0.88
TRAPPC12-210ENST00000441983 ERBB3P21860 1342 aa20.53■□□□□ 0.88
TRAPPC12-210ENST00000441983 RRS1Q15050 365 aaKnown RBP20.52■□□□□ 0.88
TRAPPC12-210ENST00000441983 RALBP1Q15311 655 aa20.52■□□□□ 0.88
TRAPPC12-210ENST00000441983 POLKQ9UBT6 870 aa20.52■□□□□ 0.88
TRAPPC12-210ENST00000441983 WDR17Q8IZU2 1322 aa20.52■□□□□ 0.87
TRAPPC12-210ENST00000441983 GLI3P10071 1580 aa20.51■□□□□ 0.87
TRAPPC12-210ENST00000441983 ZBTB7CA1YPR0 619 aa20.5■□□□□ 0.87
TRAPPC12-210ENST00000441983 RGS17Q9UGC6 210 aaPredicted RBP20.5■□□□□ 0.87
TRAPPC12-210ENST00000441983 AXIN2Q9Y2T1 843 aa20.5■□□□□ 0.87
TRAPPC12-210ENST00000441983 EMILIN1Q9Y6C2 1016 aa20.5■□□□□ 0.87
TRAPPC12-210ENST00000441983 TNNT2P45379 298 aaPredicted RBP20.48■□□□□ 0.87
TRAPPC12-210ENST00000441983 EVA1CP58658 441 aa20.48■□□□□ 0.87
TRAPPC12-210ENST00000441983 FBLN1P23142 703 aa20.47■□□□□ 0.87
TRAPPC12-210ENST00000441983 QTRT2Q9H974 415 aaKnown RBP20.47■□□□□ 0.87
TRAPPC12-210ENST00000441983 THRAP3Q9Y2W1 955 aaKnown RBP20.47■□□□□ 0.87
TRAPPC12-210ENST00000441983 SPATA31A5Q5VU36 1347 aa20.47■□□□□ 0.87
TRAPPC12-210ENST00000441983 SPATA31A7Q8IWB4 1347 aa20.47■□□□□ 0.87
TRAPPC12-210ENST00000441983 THSD7AQ9UPZ6 1657 aa20.46■□□□□ 0.87
TRAPPC12-210ENST00000441983 RBM6P78332 1123 aaKnown RBP20.46■□□□□ 0.87
TRAPPC12-210ENST00000441983 ANKRD24Q8TF21 1146 aa20.46■□□□□ 0.87
TRAPPC12-210ENST00000441983 RGPD1P0DJD0 1748 aa20.46■□□□□ 0.87
TRAPPC12-210ENST00000441983 PARP4Q9UKK3 1724 aaKnown RBP20.46■□□□□ 0.87
TRAPPC12-210ENST00000441983 SPATA31A1Q5TZJ5 1347 aa20.46■□□□□ 0.87
TRAPPC12-210ENST00000441983 RGPD2P0DJD1 1756 aa20.46■□□□□ 0.87
TRAPPC12-210ENST00000441983 NCAPD2Q15021 1401 aa20.45■□□□□ 0.86
TRAPPC12-210ENST00000441983 GJD4Q96KN9 370 aaPredicted RBP20.45■□□□□ 0.86
TRAPPC12-210ENST00000441983 STRN4Q9NRL3 753 aa20.45■□□□□ 0.86
TRAPPC12-210ENST00000441983 PLEKHG2Q9H7P9 1386 aa20.45■□□□□ 0.86
TRAPPC12-210ENST00000441983 COL3A1P02461 1466 aaPredicted RBP20.44■□□□□ 0.86
TRAPPC12-210ENST00000441983 CARD10Q9BWT7 1032 aa20.44■□□□□ 0.86
TRAPPC12-210ENST00000441983 PPM1GO15355 546 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC12-210ENST00000441983 PPP2R1AP30153 589 aa20.43■□□□□ 0.86
TRAPPC12-210ENST00000441983 MTHFSP49914 203 aa20.43■□□□□ 0.86
TRAPPC12-210ENST00000441983 HSP90AB2PQ58FF8 381 aa20.43■□□□□ 0.86
TRAPPC12-210ENST00000441983 LARP1Q6PKG0 1096 aaKnown RBP20.43■□□□□ 0.86
TRAPPC12-210ENST00000441983 PRKRIP1Q9H875 184 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC12-210ENST00000441983 MYBBP1AQ9BQG0 1328 aaKnown RBP20.43■□□□□ 0.86
TRAPPC12-210ENST00000441983 CSB-PGBD3P0DP91 1061 aa20.42■□□□□ 0.86
TRAPPC12-210ENST00000441983 TOM1L2Q6ZVM7 507 aa20.42■□□□□ 0.86
TRAPPC12-210ENST00000441983 RXRBP28702 533 aa20.41■□□□□ 0.86
TRAPPC12-210ENST00000441983 POTEAQ6S8J7 498 aa20.41■□□□□ 0.86
TRAPPC12-210ENST00000441983 BARGINQ6ZT62 677 aa20.41■□□□□ 0.86
TRAPPC12-210ENST00000441983 CFAP53Q96M91 514 aa20.41■□□□□ 0.86
TRAPPC12-210ENST00000441983 TCP11L2Q8N4U5 519 aa20.4■□□□□ 0.86
TRAPPC12-210ENST00000441983 CDCA7Q9BWT1 371 aaPredicted RBP20.4■□□□□ 0.86
TRAPPC12-210ENST00000441983 CCDC9Q9Y3X0 531 aaKnown RBP20.4■□□□□ 0.86
TRAPPC12-210ENST00000441983 ONECUT3O60422 494 aaPredicted RBP20.39■□□□□ 0.85
TRAPPC12-210ENST00000441983 LRRC37A3O60309 1634 aa20.38■□□□□ 0.85
TRAPPC12-210ENST00000441983 DISP2A7MBM2 1401 aa20.38■□□□□ 0.85
TRAPPC12-210ENST00000441983 ANP32CO43423 234 aa20.37■□□□□ 0.85
TRAPPC12-210ENST00000441983 CNGB1Q14028 1251 aaPredicted RBP20.37■□□□□ 0.85
TRAPPC12-210ENST00000441983 EIF4A2Q14240 407 aaKnown RBP20.37■□□□□ 0.85
TRAPPC12-210ENST00000441983 RGS12O14924 1447 aa20.36■□□□□ 0.85
TRAPPC12-210ENST00000441983 IGSF1Q8N6C5 1336 aa20.36■□□□□ 0.85
TRAPPC12-210ENST00000441983 NLRP2Q9NX02 1062 aa20.36■□□□□ 0.85
TRAPPC12-210ENST00000441983 DIAPH1O60610 1272 aaKnown RBP20.35■□□□□ 0.85
TRAPPC12-210ENST00000441983 LTV1Q96GA3 475 aaPredicted RBP20.35■□□□□ 0.85
TRAPPC12-210ENST00000441983 PKD1L3Q7Z443 1732 aa20.35■□□□□ 0.85
TRAPPC12-210ENST00000441983 KDRP35968 1356 aa20.34■□□□□ 0.85
TRAPPC12-210ENST00000441983 BRWD3Q6RI45 1802 aa20.34■□□□□ 0.85
TRAPPC12-210ENST00000441983 IL13P35225 146 aa20.34■□□□□ 0.85
TRAPPC12-210ENST00000441983 NBPF6Q5VWK0 638 aa20.33■□□□□ 0.85
TRAPPC12-210ENST00000441983 NBPF4Q96M43 638 aa20.33■□□□□ 0.85
TRAPPC12-210ENST00000441983 TNS2Q63HR2 1409 aa20.32■□□□□ 0.84
TRAPPC12-210ENST00000441983 EP400Q96L91 3159 aa20.31■□□□□ 0.84
TRAPPC12-210ENST00000441983 OVOS2A0A0G2JMS6 1433 aa20.31■□□□□ 0.84
TRAPPC12-210ENST00000441983 IL2RBP14784 551 aa20.31■□□□□ 0.84
TRAPPC12-210ENST00000441983 FAM98CQ17RN3 349 aaKnown RBP20.31■□□□□ 0.84
TRAPPC12-210ENST00000441983 EYA1Q99502 592 aa20.31■□□□□ 0.84
TRAPPC12-210ENST00000441983 USP35Q9P2H5 1018 aa20.31■□□□□ 0.84
TRAPPC12-210ENST00000441983 NUDCQ9Y266 331 aa20.31■□□□□ 0.84
TRAPPC12-210ENST00000441983 SHANK3Q9BYB0 1731 aa20.3■□□□□ 0.84
TRAPPC12-210ENST00000441983 MEGF6O75095 1541 aa20.29■□□□□ 0.84
TRAPPC12-210ENST00000441983 SEPT12Q8IYM1 358 aa20.28■□□□□ 0.84
TRAPPC12-210ENST00000441983 RAPGEF4Q8WZA2 1011 aa20.27■□□□□ 0.84
TRAPPC12-210ENST00000441983 TATP17735 454 aaPredicted RBP20.25■□□□□ 0.83
TRAPPC12-210ENST00000441983 DDB1Q16531 1140 aa20.25■□□□□ 0.83
TRAPPC12-210ENST00000441983 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.25■□□□□ 0.83
TRAPPC12-210ENST00000441983 BCL9O00512 1426 aa20.24■□□□□ 0.83
TRAPPC12-210ENST00000441983 A0A0G2JS52 829 aa20.23■□□□□ 0.83
TRAPPC12-210ENST00000441983 MYT1Q01538 1121 aa20.23■□□□□ 0.83
TRAPPC12-210ENST00000441983 DIEXFQ68CQ4 756 aaKnown RBP20.23■□□□□ 0.83
TRAPPC12-210ENST00000441983 USHBP1Q8N6Y0 703 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms