RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 MARCH10Q8NA82 808 aaPredicted RBP14.61□□□□□ -0.07
SYN3-204ENST00000441821 SYT17Q9BSW7 474 aa14.61□□□□□ -0.07
SYN3-204ENST00000441821 CDCA7Q9BWT1 371 aaPredicted RBP14.61□□□□□ -0.07
SYN3-204ENST00000441821 FHDC1Q9C0D6 1143 aaPredicted RBP14.6□□□□□ -0.07
SYN3-204ENST00000441821 STK32BQ9NY57 414 aa14.6□□□□□ -0.07
SYN3-204ENST00000441821 GOLGB1Q14789 3259 aaKnown RBP14.6□□□□□ -0.07
SYN3-204ENST00000441821 ZBTB7CA1YPR0 619 aa14.59□□□□□ -0.07
SYN3-204ENST00000441821 NLRP6P59044 892 aa14.59□□□□□ -0.07
SYN3-204ENST00000441821 SRPK2P78362 688 aaKnown RBP14.59□□□□□ -0.07
SYN3-204ENST00000441821 SLC15A2Q16348 729 aa14.59□□□□□ -0.07
SYN3-204ENST00000441821 TXNRD1Q16881 649 aa14.59□□□□□ -0.07
SYN3-204ENST00000441821 SLIT3O75094 1523 aa14.59□□□□□ -0.07
SYN3-204ENST00000441821 WDR17Q8IZU2 1322 aa14.59□□□□□ -0.07
SYN3-204ENST00000441821 COL18A1P39060 1754 aa14.58□□□□□ -0.08
SYN3-204ENST00000441821 SGIP1Q9BQI5 828 aa14.58□□□□□ -0.08
SYN3-204ENST00000441821 MTFR1LQ9H019 292 aa14.58□□□□□ -0.08
SYN3-204ENST00000441821 AXIN2Q9Y2T1 843 aa14.58□□□□□ -0.08
SYN3-204ENST00000441821 KIAA1210Q9ULL0 1709 aa14.58□□□□□ -0.08
SYN3-204ENST00000441821 WNK3Q9BYP7 1800 aa14.57□□□□□ -0.08
SYN3-204ENST00000441821 SENP3-EIF4A1A0A087X0R7 540 aa14.57□□□□□ -0.08
SYN3-204ENST00000441821 C1QTNF8P60827 252 aa14.57□□□□□ -0.08
SYN3-204ENST00000441821 CEP350Q5VT06 3117 aa14.57□□□□□ -0.08
SYN3-204ENST00000441821 AKAP12Q02952 1782 aa14.57□□□□□ -0.08
SYN3-204ENST00000441821 USP6P35125 1406 aa14.57□□□□□ -0.08
SYN3-204ENST00000441821 CARD10Q9BWT7 1032 aa14.56□□□□□ -0.08
SYN3-204ENST00000441821 CABP2Q9NPB3 220 aa14.56□□□□□ -0.08
SYN3-204ENST00000441821 CHD4Q14839 1912 aa14.55□□□□□ -0.08
SYN3-204ENST00000441821 EXOC5O00471 708 aa14.55□□□□□ -0.08
SYN3-204ENST00000441821 CABP1Q9NZU7 370 aa14.55□□□□□ -0.08
SYN3-204ENST00000441821 NBPF1Q3BBV0 1214 aa14.54□□□□□ -0.08
SYN3-204ENST00000441821 ARHGEF25Q86VW2 580 aa14.54□□□□□ -0.08
SYN3-204ENST00000441821 ARXQ96QS3 562 aa14.54□□□□□ -0.08
SYN3-204ENST00000441821 CENPJQ9HC77 1338 aaPredicted RBP14.54□□□□□ -0.08
SYN3-204ENST00000441821 CPSF1Q10570 1443 aaKnown RBP14.53□□□□□ -0.08
SYN3-204ENST00000441821 MAP3K5Q99683 1374 aa14.53□□□□□ -0.08
SYN3-204ENST00000441821 PIK3C2AO00443 1686 aa14.52□□□□□ -0.08
SYN3-204ENST00000441821 KCNH5Q8NCM2 988 aa14.52□□□□□ -0.09
SYN3-204ENST00000441821 CSB-PGBD3P0DP91 1061 aa14.51□□□□□ -0.09
SYN3-204ENST00000441821 CCDC7Q96M83 1385 aa14.5□□□□□ -0.09
SYN3-204ENST00000441821 RGPD5Q99666 1765 aa14.5□□□□□ -0.09
SYN3-204ENST00000441821 TNS2Q63HR2 1409 aa14.49□□□□□ -0.09
SYN3-204ENST00000441821 NHSQ6T4R5 1651 aa14.49□□□□□ -0.09
SYN3-204ENST00000441821 QRICH2Q9H0J4 1663 aa14.49□□□□□ -0.09
SYN3-204ENST00000441821 TRPM1Q7Z4N2 1603 aa14.49□□□□□ -0.09
SYN3-204ENST00000441821 IFFO2Q5TF58 517 aa14.49□□□□□ -0.09
SYN3-204ENST00000441821 ZNF692Q9BU19 519 aaPredicted RBP14.49□□□□□ -0.09
SYN3-204ENST00000441821 PAPPAQ13219 1627 aa14.48□□□□□ -0.09
SYN3-204ENST00000441821 TTC21BQ7Z4L5 1316 aa14.48□□□□□ -0.09
SYN3-204ENST00000441821 GPR162Q16538 588 aa14.47□□□□□ -0.09
SYN3-204ENST00000441821 ABCC6O95255 1503 aa14.46□□□□□ -0.09
SYN3-204ENST00000441821 TTC21AQ8NDW8 1320 aa14.46□□□□□ -0.09
SYN3-204ENST00000441821 SOX12O15370 315 aa14.46□□□□□ -0.09
SYN3-204ENST00000441821 GIGYF1O75420 1035 aaPredicted RBP14.46□□□□□ -0.09
SYN3-204ENST00000441821 ACSBG1Q96GR2 724 aa14.46□□□□□ -0.09
SYN3-204ENST00000441821 NFAT5O94916 1531 aa14.46□□□□□ -0.1
SYN3-204ENST00000441821 EVC2Q86UK5 1308 aa14.45□□□□□ -0.1
SYN3-204ENST00000441821 ZNF827Q17R98 1081 aa14.45□□□□□ -0.1
SYN3-204ENST00000441821 SLC16A10Q8TF71 515 aa14.45□□□□□ -0.1
SYN3-204ENST00000441821 LRRC4BQ9NT99 713 aa14.43□□□□□ -0.1
SYN3-204ENST00000441821 IL2RBP14784 551 aa14.42□□□□□ -0.1
SYN3-204ENST00000441821 POLD1P28340 1107 aa14.42□□□□□ -0.1
SYN3-204ENST00000441821 AKT1S1Q96B36 256 aa14.42□□□□□ -0.1
SYN3-204ENST00000441821 BTAF1O14981 1849 aa14.42□□□□□ -0.1
SYN3-204ENST00000441821 ERBB3P21860 1342 aa14.41□□□□□ -0.1
SYN3-204ENST00000441821 COL24A1Q17RW2 1714 aa14.41□□□□□ -0.1
SYN3-204ENST00000441821 QSER1Q2KHR3 1735 aa14.41□□□□□ -0.1
SYN3-204ENST00000441821 SLC27A3Q5K4L6 730 aa14.4□□□□□ -0.1
SYN3-204ENST00000441821 NLRP2Q9NX02 1062 aa14.4□□□□□ -0.1
SYN3-204ENST00000441821 KTN1Q86UP2 1357 aaKnown RBP14.39□□□□□ -0.11
SYN3-204ENST00000441821 KLHL34Q8N239 644 aa14.39□□□□□ -0.11
SYN3-204ENST00000441821 SHANK3Q9BYB0 1731 aa14.38□□□□□ -0.11
SYN3-204ENST00000441821 USP31Q70CQ4 1352 aa14.38□□□□□ -0.11
SYN3-204ENST00000441821 PELP1Q8IZL8 1130 aaKnown RBP14.38□□□□□ -0.11
SYN3-204ENST00000441821 PNPLA7Q6ZV29 1317 aa14.38□□□□□ -0.11
SYN3-204ENST00000441821 NLGN2Q8NFZ4 835 aa14.37□□□□□ -0.11
SYN3-204ENST00000441821 TFCP2L1Q9NZI6 479 aa14.37□□□□□ -0.11
SYN3-204ENST00000441821 GRIN3BO60391 1043 aa14.36□□□□□ -0.11
SYN3-204ENST00000441821 ANKRD24Q8TF21 1146 aa14.36□□□□□ -0.11
SYN3-204ENST00000441821 USP54Q70EL1 1684 aa14.36□□□□□ -0.11
SYN3-204ENST00000441821 MON2Q7Z3U7 1717 aa14.35□□□□□ -0.11
SYN3-204ENST00000441821 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.34□□□□□ -0.11
SYN3-204ENST00000441821 LTN1O94822 1766 aa14.34□□□□□ -0.11
SYN3-204ENST00000441821 YBX3P16989 372 aaKnown RBP eCLIP14.33□□□□□ -0.12
SYN3-204ENST00000441821 NME9Q86XW9 330 aa14.33□□□□□ -0.12
SYN3-204ENST00000441821 DDX54Q8TDD1 881 aaKnown RBP14.33□□□□□ -0.12
SYN3-204ENST00000441821 L3MBTL2Q969R5 705 aa14.33□□□□□ -0.12
SYN3-204ENST00000441821 TUBGCP6Q96RT7 1819 aa14.33□□□□□ -0.12
SYN3-204ENST00000441821 ANKRD36BQ8N2N9 1353 aa14.32□□□□□ -0.12
SYN3-204ENST00000441821 SBNO2Q9Y2G9 1366 aa14.32□□□□□ -0.12
SYN3-204ENST00000441821 KAT6BQ8WYB5 2073 aa14.32□□□□□ -0.12
SYN3-204ENST00000441821 PRIM1P49642 420 aaKnown RBP14.31□□□□□ -0.12
SYN3-204ENST00000441821 KCNQ4P56696 695 aa14.31□□□□□ -0.12
SYN3-204ENST00000441821 LY75O60449 1722 aa14.3□□□□□ -0.12
SYN3-204ENST00000441821 SYTL4Q96C24 671 aaPredicted RBP14.3□□□□□ -0.12
SYN3-204ENST00000441821 ROCK2O75116 1388 aaKnown RBP14.3□□□□□ -0.12
SYN3-204ENST00000441821 ATP10DQ9P241 1426 aa14.3□□□□□ -0.12
SYN3-204ENST00000441821 CD163L1Q9NR16 1453 aa14.3□□□□□ -0.12
SYN3-204ENST00000441821 IP6K1Q92551 441 aa14.29□□□□□ -0.12
SYN3-204ENST00000441821 NSD2O96028 1365 aa14.29□□□□□ -0.12
SYN3-204ENST00000441821 COL23A1Q86Y22 540 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms