RNA–Protein interactions for RNA: ENST00000441738.1

TIMP1-203, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 5

Gene TIMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-203ENST00000441738 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.53□□□□□ -0.56
TIMP1-203ENST00000441738 ZNF784Q8NCA9 323 aaPredicted RBP11.53□□□□□ -0.56
TIMP1-203ENST00000441738 GCP02774 474 aa11.52□□□□□ -0.57
TIMP1-203ENST00000441738 NLRP6P59044 892 aa11.52□□□□□ -0.57
TIMP1-203ENST00000441738 CHRNA2Q15822 529 aa11.52□□□□□ -0.57
TIMP1-203ENST00000441738 SEPT12Q8IYM1 358 aa11.52□□□□□ -0.57
TIMP1-203ENST00000441738 WASHC2AQ641Q2 1341 aa11.52□□□□□ -0.57
TIMP1-203ENST00000441738 CCDC7Q96M83 1385 aa11.52□□□□□ -0.57
TIMP1-203ENST00000441738 SLC24A1O60721 1099 aa11.51□□□□□ -0.57
TIMP1-203ENST00000441738 ZC3H6P61129 1189 aaKnown RBP11.51□□□□□ -0.57
TIMP1-203ENST00000441738 EN1Q05925 392 aaPredicted RBP11.51□□□□□ -0.57
TIMP1-203ENST00000441738 KRT27Q7Z3Y8 459 aa11.51□□□□□ -0.57
TIMP1-203ENST00000441738 NLRP13Q86W25 1043 aa11.51□□□□□ -0.57
TIMP1-203ENST00000441738 UNC5CLQ8IV45 518 aa11.51□□□□□ -0.57
TIMP1-203ENST00000441738 TERF2IPQ9NYB0 399 aa11.51□□□□□ -0.57
TIMP1-203ENST00000441738 FYB1O15117 783 aa11.5□□□□□ -0.57
TIMP1-203ENST00000441738 HDGFL2Q7Z4V5 671 aaPredicted RBP11.5□□□□□ -0.57
TIMP1-203ENST00000441738 AATKQ6ZMQ8 1374 aa11.5□□□□□ -0.57
TIMP1-203ENST00000441738 SBF2Q86WG5 1849 aa11.49□□□□□ -0.57
TIMP1-203ENST00000441738 FBLN1P23142 703 aa11.49□□□□□ -0.57
TIMP1-203ENST00000441738 ARHGEF25Q86VW2 580 aa11.49□□□□□ -0.57
TIMP1-203ENST00000441738 PRDM11Q9NQV5 511 aa11.49□□□□□ -0.57
TIMP1-203ENST00000441738 BTG4Q9NY30 223 aa11.49□□□□□ -0.57
TIMP1-203ENST00000441738 AXIN2Q9Y2T1 843 aa11.49□□□□□ -0.57
TIMP1-203ENST00000441738 TNS1Q9HBL0 1735 aaKnown RBP11.49□□□□□ -0.57
TIMP1-203ENST00000441738 VPS72Q15906 364 aa11.48□□□□□ -0.57
TIMP1-203ENST00000441738 CDCA8Q53HL2 280 aa11.48□□□□□ -0.57
TIMP1-203ENST00000441738 RGPD1P0DJD0 1748 aa11.47□□□□□ -0.57
TIMP1-203ENST00000441738 HAP1P54257 671 aaPredicted RBP11.47□□□□□ -0.57
TIMP1-203ENST00000441738 GGNBP2Q9H3C7 697 aa11.47□□□□□ -0.57
TIMP1-203ENST00000441738 PPP1R1BQ9UD71 204 aaPredicted RBP11.47□□□□□ -0.57
TIMP1-203ENST00000441738 SPATA31A5Q5VU36 1347 aa11.46□□□□□ -0.57
TIMP1-203ENST00000441738 SPATA31A7Q8IWB4 1347 aa11.46□□□□□ -0.57
TIMP1-203ENST00000441738 DISP2A7MBM2 1401 aa11.45□□□□□ -0.58
TIMP1-203ENST00000441738 SMG6Q86US8 1419 aaKnown RBP11.45□□□□□ -0.58
TIMP1-203ENST00000441738 SOX12O15370 315 aa11.45□□□□□ -0.58
TIMP1-203ENST00000441738 ONECUT3O60422 494 aaPredicted RBP11.45□□□□□ -0.58
TIMP1-203ENST00000441738 PANK3Q9H999 370 aa11.45□□□□□ -0.58
TIMP1-203ENST00000441738 CRB1P82279 1406 aa11.44□□□□□ -0.58
TIMP1-203ENST00000441738 MAP3K19Q56UN5 1328 aa11.44□□□□□ -0.58
TIMP1-203ENST00000441738 SPATA31A1Q5TZJ5 1347 aa11.44□□□□□ -0.58
TIMP1-203ENST00000441738 PER1O15534 1290 aaPredicted RBP11.44□□□□□ -0.58
TIMP1-203ENST00000441738 LARP1Q6PKG0 1096 aaKnown RBP11.44□□□□□ -0.58
TIMP1-203ENST00000441738 POLR3GLQ9BT43 218 aa11.44□□□□□ -0.58
TIMP1-203ENST00000441738 KCNH5Q8NCM2 988 aa11.43□□□□□ -0.58
TIMP1-203ENST00000441738 PKD1L3Q7Z443 1732 aa11.43□□□□□ -0.58
TIMP1-203ENST00000441738 ERBB3P21860 1342 aa11.42□□□□□ -0.58
TIMP1-203ENST00000441738 A0A0G2JS52 829 aa11.42□□□□□ -0.58
TIMP1-203ENST00000441738 MYT1Q01538 1121 aa11.42□□□□□ -0.58
TIMP1-203ENST00000441738 EZH2Q15910 746 aaKnown RBP11.42□□□□□ -0.58
TIMP1-203ENST00000441738 AMER1Q5JTC6 1135 aaPredicted RBP11.42□□□□□ -0.58
TIMP1-203ENST00000441738 CCDC9Q9Y3X0 531 aaKnown RBP11.42□□□□□ -0.58
TIMP1-203ENST00000441738 NCAPD2Q15021 1401 aa11.42□□□□□ -0.58
TIMP1-203ENST00000441738 RTL1A6NKG5 1358 aa11.41□□□□□ -0.58
TIMP1-203ENST00000441738 WDR17Q8IZU2 1322 aa11.41□□□□□ -0.58
TIMP1-203ENST00000441738 SPON1Q9HCB6 807 aa11.41□□□□□ -0.58
TIMP1-203ENST00000441738 STRN4Q9NRL3 753 aa11.41□□□□□ -0.58
TIMP1-203ENST00000441738 VIRMAQ69YN4 1812 aaKnown RBP11.41□□□□□ -0.58
TIMP1-203ENST00000441738 RRS1Q15050 365 aaKnown RBP11.4□□□□□ -0.58
TIMP1-203ENST00000441738 COG3Q96JB2 828 aa11.4□□□□□ -0.58
TIMP1-203ENST00000441738 TOGARAM1Q9Y4F4 1720 aa11.4□□□□□ -0.58
TIMP1-203ENST00000441738 NSD2O96028 1365 aa11.4□□□□□ -0.59
TIMP1-203ENST00000441738 CGNL1Q0VF96 1302 aa11.39□□□□□ -0.59
TIMP1-203ENST00000441738 COL3A1P02461 1466 aaPredicted RBP11.39□□□□□ -0.59
TIMP1-203ENST00000441738 ZBTB7CA1YPR0 619 aa11.39□□□□□ -0.59
TIMP1-203ENST00000441738 HOXC9P31274 260 aa11.39□□□□□ -0.59
TIMP1-203ENST00000441738 FAM98CQ17RN3 349 aaKnown RBP11.39□□□□□ -0.59
TIMP1-203ENST00000441738 EMILIN1Q9Y6C2 1016 aa11.39□□□□□ -0.59
TIMP1-203ENST00000441738 DOT1LQ8TEK3 1739 aa11.38□□□□□ -0.59
TIMP1-203ENST00000441738 KCNQ2O43526 872 aa11.38□□□□□ -0.59
TIMP1-203ENST00000441738 IP6K1Q92551 441 aa11.38□□□□□ -0.59
TIMP1-203ENST00000441738 CAMKK2Q96RR4 588 aa11.38□□□□□ -0.59
TIMP1-203ENST00000441738 MEGF6O75095 1541 aa11.38□□□□□ -0.59
TIMP1-203ENST00000441738 NHSQ6T4R5 1651 aa11.37□□□□□ -0.59
TIMP1-203ENST00000441738 RREB1Q92766 1687 aa11.37□□□□□ -0.59
TIMP1-203ENST00000441738 BARGINQ6ZT62 677 aa11.37□□□□□ -0.59
TIMP1-203ENST00000441738 INSRP06213 1382 aa11.37□□□□□ -0.59
TIMP1-203ENST00000441738 FLT4P35916 1363 aa11.37□□□□□ -0.59
TIMP1-203ENST00000441738 KIF24Q5T7B8 1368 aa11.37□□□□□ -0.59
TIMP1-203ENST00000441738 NPC1L1Q9UHC9 1359 aa11.37□□□□□ -0.59
TIMP1-203ENST00000441738 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
TIMP1-203ENST00000441738 ANKRD24Q8TF21 1146 aa11.36□□□□□ -0.59
TIMP1-203ENST00000441738 POLKQ9UBT6 870 aa11.36□□□□□ -0.59
TIMP1-203ENST00000441738 RGPD3A6NKT7 1758 aaPredicted RBP11.36□□□□□ -0.59
TIMP1-203ENST00000441738 RGPD4Q7Z3J3 1758 aa11.36□□□□□ -0.59
TIMP1-203ENST00000441738 TNS2Q63HR2 1409 aa11.35□□□□□ -0.59
TIMP1-203ENST00000441738 ITGB4P16144 1822 aa11.35□□□□□ -0.59
TIMP1-203ENST00000441738 GIGYF1O75420 1035 aaPredicted RBP11.35□□□□□ -0.59
TIMP1-203ENST00000441738 HSP90AB2PQ58FF8 381 aa11.35□□□□□ -0.59
TIMP1-203ENST00000441738 FAM182BQ5T319 152 aa11.35□□□□□ -0.59
TIMP1-203ENST00000441738 CARD10Q9BWT7 1032 aa11.35□□□□□ -0.59
TIMP1-203ENST00000441738 USP35Q9P2H5 1018 aa11.35□□□□□ -0.59
TIMP1-203ENST00000441738 BTAF1O14981 1849 aa11.35□□□□□ -0.59
TIMP1-203ENST00000441738 PARD3Q8TEW0 1356 aa11.34□□□□□ -0.59
TIMP1-203ENST00000441738 TCP11L2Q8N4U5 519 aa11.34□□□□□ -0.59
TIMP1-203ENST00000441738 NUP188Q5SRE5 1749 aa11.34□□□□□ -0.59
TIMP1-203ENST00000441738 THRAP3Q9Y2W1 955 aaKnown RBP11.33□□□□□ -0.6
TIMP1-203ENST00000441738 APBA3O96018 575 aa11.32□□□□□ -0.6
TIMP1-203ENST00000441738 TNNT2P45379 298 aaPredicted RBP11.32□□□□□ -0.6
TIMP1-203ENST00000441738 EVA1CP58658 441 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 482.6 ms