RNA–Protein interactions for RNA: ENST00000441730.2

BRPF3-204, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 3,329 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-204ENST00000441730 MED14O60244 1454 aa13.27□□□□□ -0.28
BRPF3-204ENST00000441730 AMPHP49418 695 aa13.27□□□□□ -0.28
BRPF3-204ENST00000441730 MMP14P50281 582 aa13.27□□□□□ -0.28
BRPF3-204ENST00000441730 CERKQ8TCT0 537 aa13.27□□□□□ -0.28
BRPF3-204ENST00000441730 ZNF622Q969S3 477 aaKnown RBP eCLIP13.27□□□□□ -0.28
BRPF3-204ENST00000441730 IFT172Q9UG01 1749 aa13.27□□□□□ -0.29
BRPF3-204ENST00000441730 PER1O15534 1290 aaPredicted RBP13.27□□□□□ -0.29
BRPF3-204ENST00000441730 MTHFSP49914 203 aa13.27□□□□□ -0.29
BRPF3-204ENST00000441730 FAM43BQ6ZT52 329 aaPredicted RBP13.27□□□□□ -0.29
BRPF3-204ENST00000441730 RRAGDQ9NQL2 400 aaPredicted RBP13.27□□□□□ -0.29
BRPF3-204ENST00000441730 FAM135BQ49AJ0 1406 aa13.26□□□□□ -0.29
BRPF3-204ENST00000441730 ZNF692Q9BU19 519 aaPredicted RBP13.26□□□□□ -0.29
BRPF3-204ENST00000441730 HDAC5Q9UQL6 1122 aa13.26□□□□□ -0.29
BRPF3-204ENST00000441730 EMILIN1Q9Y6C2 1016 aa13.26□□□□□ -0.29
BRPF3-204ENST00000441730 TTC21BQ7Z4L5 1316 aa13.26□□□□□ -0.29
BRPF3-204ENST00000441730 PTMSP20962 102 aa13.26□□□□□ -0.29
BRPF3-204ENST00000441730 DDRGK1Q96HY6 314 aa13.26□□□□□ -0.29
BRPF3-204ENST00000441730 A0A0G2JS52 829 aa13.25□□□□□ -0.29
BRPF3-204ENST00000441730 TULP4Q9NRJ4 1543 aa13.25□□□□□ -0.29
BRPF3-204ENST00000441730 ADGRL3Q9HAR2 1447 aa13.24□□□□□ -0.29
BRPF3-204ENST00000441730 CSB-PGBD3P0DP91 1061 aa13.24□□□□□ -0.29
BRPF3-204ENST00000441730 UTP14CQ5TAP6 766 aaKnown RBP13.24□□□□□ -0.29
BRPF3-204ENST00000441730 ZHX1Q9UKY1 873 aaPredicted RBP13.24□□□□□ -0.29
BRPF3-204ENST00000441730 CCDC146Q8IYE0 955 aa13.24□□□□□ -0.29
BRPF3-204ENST00000441730 WDR43Q15061 677 aaKnown RBP eCLIP13.23□□□□□ -0.29
BRPF3-204ENST00000441730 STRN4Q9NRL3 753 aa13.23□□□□□ -0.29
BRPF3-204ENST00000441730 AXDND1Q5T1B0 1012 aaPredicted RBP13.23□□□□□ -0.29
BRPF3-204ENST00000441730 QRICH2Q9H0J4 1663 aa13.23□□□□□ -0.29
BRPF3-204ENST00000441730 NPHP3Q7Z494 1330 aa13.22□□□□□ -0.29
BRPF3-204ENST00000441730 ZNF142P52746 1687 aaPredicted RBP13.22□□□□□ -0.29
BRPF3-204ENST00000441730 TPM2P07951 284 aa13.22□□□□□ -0.29
BRPF3-204ENST00000441730 HNRNPUQ00839 825 aaKnown RBP eCLIP13.22□□□□□ -0.29
BRPF3-204ENST00000441730 NLRP13Q86W25 1043 aa13.22□□□□□ -0.29
BRPF3-204ENST00000441730 PSMD1Q99460 953 aa13.22□□□□□ -0.29
BRPF3-204ENST00000441730 PLEKHG3A1L390 1219 aa13.22□□□□□ -0.29
BRPF3-204ENST00000441730 APPP05067 770 aa13.22□□□□□ -0.29
BRPF3-204ENST00000441730 U2AF1L5P0DN76 240 aaPredicted RBP13.22□□□□□ -0.29
BRPF3-204ENST00000441730 U2AF1Q01081 240 aaKnown RBP eCLIP13.22□□□□□ -0.29
BRPF3-204ENST00000441730 ANKRD36BQ8N2N9 1353 aa13.22□□□□□ -0.29
BRPF3-204ENST00000441730 PTCH1Q13635 1447 aa13.22□□□□□ -0.29
BRPF3-204ENST00000441730 HMOX1P09601 288 aa13.21□□□□□ -0.29
BRPF3-204ENST00000441730 PPP2R1AP30153 589 aa13.21□□□□□ -0.29
BRPF3-204ENST00000441730 PPP4R3BQ5MIZ7 849 aa13.21□□□□□ -0.29
BRPF3-204ENST00000441730 SBNO2Q9Y2G9 1366 aa13.21□□□□□ -0.29
BRPF3-204ENST00000441730 STRCQ7RTU9 1775 aa13.21□□□□□ -0.29
BRPF3-204ENST00000441730 TECPR2O15040 1411 aa13.21□□□□□ -0.29
BRPF3-204ENST00000441730 LRRC7Q96NW7 1537 aa13.21□□□□□ -0.3
BRPF3-204ENST00000441730 PLCB2Q00722 1185 aa13.2□□□□□ -0.3
BRPF3-204ENST00000441730 FRAT1Q92837 279 aaPredicted RBP13.2□□□□□ -0.3
BRPF3-204ENST00000441730 PRDM11Q9NQV5 511 aa13.2□□□□□ -0.3
BRPF3-204ENST00000441730 ARHGEF28Q8N1W1 1705 aaKnown RBP13.2□□□□□ -0.3
BRPF3-204ENST00000441730 LAMC1P11047 1609 aa13.2□□□□□ -0.3
BRPF3-204ENST00000441730 USHBP1Q8N6Y0 703 aa13.19□□□□□ -0.3
BRPF3-204ENST00000441730 CLCN1P35523 988 aa13.19□□□□□ -0.3
BRPF3-204ENST00000441730 RALBP1Q15311 655 aa13.19□□□□□ -0.3
BRPF3-204ENST00000441730 CFAP53Q96M91 514 aa13.19□□□□□ -0.3
BRPF3-204ENST00000441730 C1orf167Q5SNV9 1468 aa13.19□□□□□ -0.3
BRPF3-204ENST00000441730 POLR1AO95602 1720 aaPredicted RBP13.19□□□□□ -0.3
BRPF3-204ENST00000441730 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.19□□□□□ -0.3
BRPF3-204ENST00000441730 HSP90AB2PQ58FF8 381 aa13.19□□□□□ -0.3
BRPF3-204ENST00000441730 RRP7AQ9Y3A4 280 aaKnown RBP13.19□□□□□ -0.3
BRPF3-204ENST00000441730 PHF14O94880 888 aa13.18□□□□□ -0.3
BRPF3-204ENST00000441730 MAP7D2Q96T17 732 aa13.18□□□□□ -0.3
BRPF3-204ENST00000441730 GCP02774 474 aa13.17□□□□□ -0.3
BRPF3-204ENST00000441730 MAPK8IP2Q13387 824 aaPredicted RBP13.17□□□□□ -0.3
BRPF3-204ENST00000441730 MEX3CQ5U5Q3 659 aaKnown RBP13.17□□□□□ -0.3
BRPF3-204ENST00000441730 MYBBP1AQ9BQG0 1328 aaKnown RBP13.17□□□□□ -0.3
BRPF3-204ENST00000441730 ATP7BP35670 1465 aa13.17□□□□□ -0.3
BRPF3-204ENST00000441730 MYCNP04198 464 aaPredicted RBP13.17□□□□□ -0.3
BRPF3-204ENST00000441730 EVA1CP58658 441 aa13.17□□□□□ -0.3
BRPF3-204ENST00000441730 DIP2AQ14689 1571 aa13.17□□□□□ -0.3
BRPF3-204ENST00000441730 KIAA1210Q9ULL0 1709 aa13.17□□□□□ -0.3
BRPF3-204ENST00000441730 HSPA1LP34931 641 aa13.16□□□□□ -0.3
BRPF3-204ENST00000441730 NLRP2Q9NX02 1062 aa13.16□□□□□ -0.3
BRPF3-204ENST00000441730 KDM5AP29375 1690 aaKnown RBP13.16□□□□□ -0.3
BRPF3-204ENST00000441730 LAS1LQ9Y4W2 734 aaKnown RBP13.15□□□□□ -0.3
BRPF3-204ENST00000441730 C8orf37Q96NL8 207 aa13.15□□□□□ -0.3
BRPF3-204ENST00000441730 LRRC59Q96AG4 307 aaKnown RBP13.15□□□□□ -0.31
BRPF3-204ENST00000441730 DLC1Q96QB1 1528 aa13.14□□□□□ -0.31
BRPF3-204ENST00000441730 POLKQ9UBT6 870 aa13.14□□□□□ -0.31
BRPF3-204ENST00000441730 DNTTIP2Q5QJE6 756 aaKnown RBP13.14□□□□□ -0.31
BRPF3-204ENST00000441730 MST1RQ04912 1400 aa13.14□□□□□ -0.31
BRPF3-204ENST00000441730 CPS1P31327 1500 aa13.13□□□□□ -0.31
BRPF3-204ENST00000441730 PSEN1P49768 467 aa13.13□□□□□ -0.31
BRPF3-204ENST00000441730 DMTNQ08495 405 aa13.13□□□□□ -0.31
BRPF3-204ENST00000441730 ADAMTS8Q9UP79 889 aa13.13□□□□□ -0.31
BRPF3-204ENST00000441730 NKTRP30414 1462 aaKnown RBP13.13□□□□□ -0.31
BRPF3-204ENST00000441730 CHD2O14647 1828 aaKnown RBP13.13□□□□□ -0.31
BRPF3-204ENST00000441730 USP6P35125 1406 aa13.13□□□□□ -0.31
BRPF3-204ENST00000441730 NGLY1Q96IV0 654 aa13.13□□□□□ -0.31
BRPF3-204ENST00000441730 MAP3K19Q56UN5 1328 aa13.13□□□□□ -0.31
BRPF3-204ENST00000441730 NUDCQ9Y266 331 aa13.13□□□□□ -0.31
BRPF3-204ENST00000441730 DIAPH1O60610 1272 aaKnown RBP13.12□□□□□ -0.31
BRPF3-204ENST00000441730 TAF3Q5VWG9 929 aa13.12□□□□□ -0.31
BRPF3-204ENST00000441730 SETD1AO15047 1707 aaKnown RBP13.11□□□□□ -0.31
BRPF3-204ENST00000441730 SETQ01105 290 aaPredicted RBP13.11□□□□□ -0.31
BRPF3-204ENST00000441730 STRCP1A6NGW2 1772 aa13.11□□□□□ -0.31
BRPF3-204ENST00000441730 KIF20AO95235 890 aa13.1□□□□□ -0.31
BRPF3-204ENST00000441730 SULT6B1Q6IMI4 303 aa13.1□□□□□ -0.31
BRPF3-204ENST00000441730 EDC4Q6P2E9 1401 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms