RNA–Protein interactions for RNA: ENST00000441679.1

EPHA4-208, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 565 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-208ENST00000441679 FAM50AQ14320 339 aaKnown RBP11.15□□□□□ -0.62
EPHA4-208ENST00000441679 PUS10Q3MIT2 529 aaKnown RBP11.15□□□□□ -0.62
EPHA4-208ENST00000441679 RETREG3Q86VR2 466 aa11.15□□□□□ -0.62
EPHA4-208ENST00000441679 KRTAP3-3Q9BYR6 98 aa11.15□□□□□ -0.62
EPHA4-208ENST00000441679 KRTAP3-2Q9BYR7 98 aa11.15□□□□□ -0.62
EPHA4-208ENST00000441679 PRR7Q8TB68 274 aa11.14□□□□□ -0.63
EPHA4-208ENST00000441679 SYMPKQ92797 1274 aaKnown RBP11.14□□□□□ -0.63
EPHA4-208ENST00000441679 CCDC97Q96F63 343 aaPredicted RBP11.14□□□□□ -0.63
EPHA4-208ENST00000441679 HPS5Q9UPZ3 1129 aa11.14□□□□□ -0.63
EPHA4-208ENST00000441679 ABCC10Q5T3U5 1492 aa11.13□□□□□ -0.63
EPHA4-208ENST00000441679 WNT2BQ93097 391 aa11.13□□□□□ -0.63
EPHA4-208ENST00000441679 GJD4Q96KN9 370 aaPredicted RBP11.13□□□□□ -0.63
EPHA4-208ENST00000441679 TSR3Q9UJK0 312 aaKnown RBP11.13□□□□□ -0.63
EPHA4-208ENST00000441679 SERPINA10Q9UK55 444 aa11.13□□□□□ -0.63
EPHA4-208ENST00000441679 SLC27A5Q9Y2P5 690 aa11.13□□□□□ -0.63
EPHA4-208ENST00000441679 ARAP3Q8WWN8 1544 aa11.13□□□□□ -0.63
EPHA4-208ENST00000441679 GLI2P10070 1586 aa11.12□□□□□ -0.63
EPHA4-208ENST00000441679 GPATCH8Q9UKJ3 1502 aaKnown RBP11.12□□□□□ -0.63
EPHA4-208ENST00000441679 TEX14Q8IWB6 1497 aa11.12□□□□□ -0.63
EPHA4-208ENST00000441679 RRBP1Q9P2E9 1410 aaKnown RBP11.11□□□□□ -0.63
EPHA4-208ENST00000441679 BCAMP50895 628 aa11.11□□□□□ -0.63
EPHA4-208ENST00000441679 HMX1Q9NP08 348 aaPredicted RBP11.11□□□□□ -0.63
EPHA4-208ENST00000441679 PLSCR2Q9NRY7 297 aa11.11□□□□□ -0.63
EPHA4-208ENST00000441679 FGD6Q6ZV73 1430 aa11.1□□□□□ -0.63
EPHA4-208ENST00000441679 KIAA1107Q9UPP5 1409 aa11.1□□□□□ -0.63
EPHA4-208ENST00000441679 LRRIQ1Q96JM4 1722 aa11.1□□□□□ -0.63
EPHA4-208ENST00000441679 LRRN4Q8WUT4 740 aa11.1□□□□□ -0.63
EPHA4-208ENST00000441679 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.09□□□□□ -0.63
EPHA4-208ENST00000441679 ITSN2Q9NZM3 1697 aa11.09□□□□□ -0.63
EPHA4-208ENST00000441679 DESI1Q6ICB0 168 aa11.09□□□□□ -0.63
EPHA4-208ENST00000441679 PCDHB3Q9Y5E6 796 aa11.09□□□□□ -0.63
EPHA4-208ENST00000441679 ABCA9Q8IUA7 1624 aa11.09□□□□□ -0.63
EPHA4-208ENST00000441679 MAGI3Q5TCQ9 1506 aa11.09□□□□□ -0.63
EPHA4-208ENST00000441679 NR1I2O75469 434 aa11.08□□□□□ -0.64
EPHA4-208ENST00000441679 APLP1P51693 650 aa11.08□□□□□ -0.64
EPHA4-208ENST00000441679 WASHC4Q2M389 1173 aa11.08□□□□□ -0.64
EPHA4-208ENST00000441679 TRIM34Q9BYJ4 488 aa11.08□□□□□ -0.64
EPHA4-208ENST00000441679 SALL2Q9Y467 1007 aaPredicted RBP11.08□□□□□ -0.64
EPHA4-208ENST00000441679 NEO1Q92859 1461 aa11.07□□□□□ -0.64
EPHA4-208ENST00000441679 ARHGAP5Q13017 1502 aa11.07□□□□□ -0.64
EPHA4-208ENST00000441679 FANCAO15360 1455 aa11.06□□□□□ -0.64
EPHA4-208ENST00000441679 FMNL1O95466 1100 aaPredicted RBP11.06□□□□□ -0.64
EPHA4-208ENST00000441679 CALR3Q96L12 384 aaKnown RBP11.06□□□□□ -0.64
EPHA4-208ENST00000441679 USB1Q9BQ65 265 aaKnown RBP11.06□□□□□ -0.64
EPHA4-208ENST00000441679 BLOC1S3Q6QNY0 202 aa11.05□□□□□ -0.64
EPHA4-208ENST00000441679 RNF19BQ6ZMZ0 732 aa11.05□□□□□ -0.64
EPHA4-208ENST00000441679 AKNAQ7Z591 1439 aa11.05□□□□□ -0.64
EPHA4-208ENST00000441679 PNMA1Q8ND90 353 aa11.05□□□□□ -0.64
EPHA4-208ENST00000441679 CFAP74Q9C0B2 1584 aa11.05□□□□□ -0.64
EPHA4-208ENST00000441679 MYT1LQ9UL68 1186 aa11.05□□□□□ -0.64
EPHA4-208ENST00000441679 TCOF1Q13428 1488 aaKnown RBP11.05□□□□□ -0.64
EPHA4-208ENST00000441679 MYO5CQ9NQX4 1742 aa11.04□□□□□ -0.64
EPHA4-208ENST00000441679 HNRNPMP52272 730 aaKnown RBP eCLIP11.04□□□□□ -0.64
EPHA4-208ENST00000441679 IRF5Q13568 498 aa11.04□□□□□ -0.64
EPHA4-208ENST00000441679 SCUBE3Q8IX30 993 aa11.04□□□□□ -0.64
EPHA4-208ENST00000441679 PCGF6Q9BYE7 350 aa11.04□□□□□ -0.64
EPHA4-208ENST00000441679 PER1O15534 1290 aaPredicted RBP11.03□□□□□ -0.64
EPHA4-208ENST00000441679 BRICD5Q6PL45 260 aa11.03□□□□□ -0.64
EPHA4-208ENST00000441679 GLMNQ92990 594 aa11.03□□□□□ -0.64
EPHA4-208ENST00000441679 ANKRD30AQ9BXX3 1397 aa11.03□□□□□ -0.64
EPHA4-208ENST00000441679 POM121CA8CG34 1229 aa11.02□□□□□ -0.65
EPHA4-208ENST00000441679 ITGAEP38570 1179 aa11.02□□□□□ -0.65
EPHA4-208ENST00000441679 NR6A1Q15406 480 aa11.02□□□□□ -0.65
EPHA4-208ENST00000441679 LYPD8Q6UX82 237 aa11.02□□□□□ -0.65
EPHA4-208ENST00000441679 WBP1LQ9NX94 342 aa11.02□□□□□ -0.65
EPHA4-208ENST00000441679 ROCK1Q13464 1354 aa11.02□□□□□ -0.65
EPHA4-208ENST00000441679 PTPN23Q9H3S7 1636 aa11.02□□□□□ -0.65
EPHA4-208ENST00000441679 SCAPERQ9BY12 1400 aa11.01□□□□□ -0.65
EPHA4-208ENST00000441679 EPS8L1Q8TE68 723 aa11.01□□□□□ -0.65
EPHA4-208ENST00000441679 DIP2BQ9P265 1576 aa11.01□□□□□ -0.65
EPHA4-208ENST00000441679 SPAG9O60271 1321 aaKnown RBP11.01□□□□□ -0.65
EPHA4-208ENST00000441679 ZNF644Q9H582 1327 aaPredicted RBP11.01□□□□□ -0.65
EPHA4-208ENST00000441679 PREX2Q70Z35 1606 aa11.01□□□□□ -0.65
EPHA4-208ENST00000441679 RTEL1-TNFRSF6BF6WH68 1400 aa11.01□□□□□ -0.65
EPHA4-208ENST00000441679 THSD4Q6ZMP0 1018 aa11□□□□□ -0.65
EPHA4-208ENST00000441679 CDC42BPAQ5VT25 1732 aa11□□□□□ -0.65
EPHA4-208ENST00000441679 DENND4BO75064 1496 aaPredicted RBP11□□□□□ -0.65
EPHA4-208ENST00000441679 ADGRL1O94910 1474 aa11□□□□□ -0.65
EPHA4-208ENST00000441679 ZNF518AQ6AHZ1 1483 aa11□□□□□ -0.65
EPHA4-208ENST00000441679 MAP3K4Q9Y6R4 1608 aa10.99□□□□□ -0.65
EPHA4-208ENST00000441679 GPR37L1O60883 481 aa10.99□□□□□ -0.65
EPHA4-208ENST00000441679 SPNS2Q8IVW8 549 aa10.99□□□□□ -0.65
EPHA4-208ENST00000441679 THAP11Q96EK4 314 aa10.99□□□□□ -0.65
EPHA4-208ENST00000441679 CAMSAP2Q08AD1 1489 aa10.99□□□□□ -0.65
EPHA4-208ENST00000441679 TTC37Q6PGP7 1564 aa10.99□□□□□ -0.65
EPHA4-208ENST00000441679 JUNDP17535 347 aa10.98□□□□□ -0.65
EPHA4-208ENST00000441679 VAC14Q08AM6 782 aa10.98□□□□□ -0.65
EPHA4-208ENST00000441679 NYAP1Q6ZVC0 841 aa10.98□□□□□ -0.65
EPHA4-208ENST00000441679 AFAP1Q8N556 730 aa10.98□□□□□ -0.65
EPHA4-208ENST00000441679 CCDC141Q6ZP82 1450 aa10.98□□□□□ -0.65
EPHA4-208ENST00000441679 CDC42BPBQ9Y5S2 1711 aa10.98□□□□□ -0.65
EPHA4-208ENST00000441679 KCTD12Q96CX2 325 aaKnown RBP10.97□□□□□ -0.65
EPHA4-208ENST00000441679 DAPK1P53355 1430 aa10.97□□□□□ -0.65
EPHA4-208ENST00000441679 ARHGEF5Q12774 1597 aa10.97□□□□□ -0.65
EPHA4-208ENST00000441679 MAGI2Q86UL8 1455 aa10.96□□□□□ -0.65
EPHA4-208ENST00000441679 MBD5Q9P267 1494 aa10.96□□□□□ -0.65
EPHA4-208ENST00000441679 SHANK2Q9UPX8 1470 aa10.96□□□□□ -0.65
EPHA4-208ENST00000441679 PTPRNQ16849 979 aa10.96□□□□□ -0.65
EPHA4-208ENST00000441679 MSS51Q4VC12 460 aa10.96□□□□□ -0.65
EPHA4-208ENST00000441679 HDGFL1Q5TGJ6 251 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms