RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 RGPD1P0DJD0 1748 aa37.03■■■■□ 3.52
CGREF1-207ENST00000440612 RSPH6AQ9H0K4 717 aa37.02■■■■□ 3.52
CGREF1-207ENST00000440612 ZNF521Q96K83 1311 aa37.01■■■■□ 3.52
CGREF1-207ENST00000440612 FCHSD2O94868 740 aa37.01■■■■□ 3.52
CGREF1-207ENST00000440612 IP6K1Q92551 441 aa37■■■■□ 3.51
CGREF1-207ENST00000440612 TCP11L2Q8N4U5 519 aa36.99■■■■□ 3.51
CGREF1-207ENST00000440612 PLEKHG5O94827 1062 aa36.98■■■■□ 3.51
CGREF1-207ENST00000440612 AHDC1Q5TGY3 1603 aaPredicted RBP36.98■■■■□ 3.51
CGREF1-207ENST00000440612 CABLES1Q8TDN4 633 aa36.96■■■■□ 3.51
CGREF1-207ENST00000440612 HMOX1P09601 288 aa36.96■■■■□ 3.51
CGREF1-207ENST00000440612 NGEFQ8N5V2 710 aa36.93■■■■□ 3.5
CGREF1-207ENST00000440612 PHF23Q9BUL5 403 aaPredicted RBP36.93■■■■□ 3.5
CGREF1-207ENST00000440612 PRKAR2BP31323 418 aa36.92■■■■□ 3.5
CGREF1-207ENST00000440612 AEBP1Q8IUX7 1158 aa36.91■■■■□ 3.5
CGREF1-207ENST00000440612 NCBP3Q53F19 620 aaKnown RBP36.9■■■■□ 3.5
CGREF1-207ENST00000440612 PDE3BQ13370 1112 aa36.9■■■■□ 3.5
CGREF1-207ENST00000440612 PNNQ9H307 717 aaKnown RBP36.9■■■■□ 3.5
CGREF1-207ENST00000440612 RRP7AQ9Y3A4 280 aaKnown RBP36.9■■■■□ 3.5
CGREF1-207ENST00000440612 IGSF1Q8N6C5 1336 aa36.89■■■■□ 3.5
CGREF1-207ENST00000440612 ZC3H6P61129 1189 aaKnown RBP36.89■■■■□ 3.5
CGREF1-207ENST00000440612 EYA1Q99502 592 aa36.89■■■■□ 3.5
CGREF1-207ENST00000440612 KDRP35968 1356 aa36.87■■■■□ 3.49
CGREF1-207ENST00000440612 TOM1O60784 492 aa36.87■■■■□ 3.49
CGREF1-207ENST00000440612 SULT6B1Q6IMI4 303 aa36.87■■■■□ 3.49
CGREF1-207ENST00000440612 CDCA7LQ96GN5 454 aa36.87■■■■□ 3.49
CGREF1-207ENST00000440612 PHACTR3Q96KR7 559 aa36.87■■■■□ 3.49
CGREF1-207ENST00000440612 AXIN2Q9Y2T1 843 aa36.86■■■■□ 3.49
CGREF1-207ENST00000440612 CPDO75976 1380 aa36.86■■■■□ 3.49
CGREF1-207ENST00000440612 TMPOP42166 694 aaKnown RBP36.85■■■■□ 3.49
CGREF1-207ENST00000440612 COL18A1P39060 1754 aa36.85■■■■□ 3.49
CGREF1-207ENST00000440612 ZBTB7CA1YPR0 619 aa36.84■■■■□ 3.49
CGREF1-207ENST00000440612 CCDC27Q2M243 656 aa36.84■■■■□ 3.49
CGREF1-207ENST00000440612 ABCA3Q99758 1704 aa36.84■■■■□ 3.49
CGREF1-207ENST00000440612 MAPK8IP3Q9UPT6 1336 aa36.84■■■■□ 3.49
CGREF1-207ENST00000440612 WWC1Q8IX03 1113 aa36.83■■■■□ 3.49
CGREF1-207ENST00000440612 LTV1Q96GA3 475 aaPredicted RBP36.82■■■■□ 3.48
CGREF1-207ENST00000440612 NEUROD2Q15784 382 aa36.81■■■■□ 3.48
CGREF1-207ENST00000440612 LRRC59Q96AG4 307 aaKnown RBP36.8■■■■□ 3.48
CGREF1-207ENST00000440612 KIAA0232Q92628 1395 aa36.8■■■■□ 3.48
CGREF1-207ENST00000440612 ABCC6O95255 1503 aa36.79■■■■□ 3.48
CGREF1-207ENST00000440612 COL16A1Q07092 1604 aaPredicted RBP36.78■■■■□ 3.48
CGREF1-207ENST00000440612 UBAP1LF5GYI3 381 aa36.77■■■■□ 3.48
CGREF1-207ENST00000440612 CERKQ8TCT0 537 aa36.77■■■■□ 3.48
CGREF1-207ENST00000440612 TRIM35Q9UPQ4 493 aa36.77■■■■□ 3.48
CGREF1-207ENST00000440612 SPINK5Q9NQ38 1064 aaPredicted RBP36.77■■■■□ 3.48
CGREF1-207ENST00000440612 PIP4K2BP78356 416 aa36.76■■■■□ 3.47
CGREF1-207ENST00000440612 GOLGA2Q08379 1002 aa36.76■■■■□ 3.47
CGREF1-207ENST00000440612 NBPF6Q5VWK0 638 aa36.76■■■■□ 3.47
CGREF1-207ENST00000440612 NBPF4Q96M43 638 aa36.76■■■■□ 3.47
CGREF1-207ENST00000440612 RGPD5Q99666 1765 aa36.75■■■■□ 3.47
CGREF1-207ENST00000440612 NCAPD2Q15021 1401 aa36.74■■■■□ 3.47
CGREF1-207ENST00000440612 NFE2L2Q16236 605 aa36.74■■■■□ 3.47
CGREF1-207ENST00000440612 ANKRD24Q8TF21 1146 aa36.74■■■■□ 3.47
CGREF1-207ENST00000440612 COL22A1Q8NFW1 1626 aaPredicted RBP36.74■■■■□ 3.47
CGREF1-207ENST00000440612 TRMT2AQ8IZ69 625 aaKnown RBP36.74■■■■□ 3.47
CGREF1-207ENST00000440612 PHLPP1O60346 1717 aa36.73■■■■□ 3.47
CGREF1-207ENST00000440612 SLFN5Q08AF3 891 aa36.73■■■■□ 3.47
CGREF1-207ENST00000440612 CHRNA2Q15822 529 aa36.73■■■■□ 3.47
CGREF1-207ENST00000440612 ERBB3P21860 1342 aa36.73■■■■□ 3.47
CGREF1-207ENST00000440612 RIPK4P57078 832 aa36.72■■■■□ 3.47
CGREF1-207ENST00000440612 CAMTA1Q9Y6Y1 1673 aa36.71■■■■□ 3.47
CGREF1-207ENST00000440612 RGPD2P0DJD1 1756 aa36.7■■■■□ 3.47
CGREF1-207ENST00000440612 NEFMP07197 916 aa36.7■■■■□ 3.47
CGREF1-207ENST00000440612 DUSP27Q5VZP5 1158 aa36.7■■■■□ 3.47
CGREF1-207ENST00000440612 WDR63Q8IWG1 891 aa36.7■■■■□ 3.47
CGREF1-207ENST00000440612 LMO7Q8WWI1 1683 aa36.68■■■■□ 3.46
CGREF1-207ENST00000440612 USHBP1Q8N6Y0 703 aa36.68■■■■□ 3.46
CGREF1-207ENST00000440612 E9PSI1 815 aa36.64■■■■□ 3.46
CGREF1-207ENST00000440612 PRDM11Q9NQV5 511 aa36.64■■■■□ 3.46
CGREF1-207ENST00000440612 HAP1P54257 671 aaPredicted RBP36.61■■■■□ 3.45
CGREF1-207ENST00000440612 DLG5Q8TDM6 1919 aa36.61■■■■□ 3.45
CGREF1-207ENST00000440612 MTHFSDQ2M296 383 aaKnown RBP36.6■■■■□ 3.45
CGREF1-207ENST00000440612 FAM83GA6ND36 823 aa36.58■■■■□ 3.45
CGREF1-207ENST00000440612 SUPT16HQ9Y5B9 1047 aaKnown RBP36.57■■■■□ 3.44
CGREF1-207ENST00000440612 FAM208AQ9UK61 1670 aaKnown RBP36.56■■■■□ 3.44
CGREF1-207ENST00000440612 IL16Q14005 1332 aa36.56■■■■□ 3.44
CGREF1-207ENST00000440612 COL5A2P05997 1499 aaPredicted RBP36.55■■■■□ 3.44
CGREF1-207ENST00000440612 GTF3C3Q9Y5Q9 886 aa36.53■■■■□ 3.44
CGREF1-207ENST00000440612 THUMPD2Q9BTF0 503 aaKnown RBP36.52■■■■□ 3.44
CGREF1-207ENST00000440612 LMOD3Q0VAK6 560 aa36.51■■■■□ 3.43
CGREF1-207ENST00000440612 GAS2L2Q8NHY3 880 aa36.5■■■■□ 3.43
CGREF1-207ENST00000440612 NLRP2Q9NX02 1062 aa36.5■■■■□ 3.43
CGREF1-207ENST00000440612 WDR17Q8IZU2 1322 aa36.49■■■■□ 3.43
CGREF1-207ENST00000440612 RNF123Q5XPI4 1314 aa36.48■■■■□ 3.43
CGREF1-207ENST00000440612 DCTN1Q14203 1278 aa36.48■■■■□ 3.43
CGREF1-207ENST00000440612 CSB-PGBD3P0DP91 1061 aa36.47■■■■□ 3.43
CGREF1-207ENST00000440612 RCAN3Q9UKA8 241 aa36.46■■■■□ 3.43
CGREF1-207ENST00000440612 COL14A1Q05707 1796 aaKnown RBP36.46■■■■□ 3.43
CGREF1-207ENST00000440612 MYH16Q9H6N6 1097 aa36.45■■■■□ 3.42
CGREF1-207ENST00000440612 FANCIQ9NVI1 1328 aa36.43■■■■□ 3.42
CGREF1-207ENST00000440612 ZNF853P0CG23 659 aa36.43■■■■□ 3.42
CGREF1-207ENST00000440612 MCM10Q7L590 875 aa36.42■■■■□ 3.42
CGREF1-207ENST00000440612 TSR2Q969E8 191 aaKnown RBP36.42■■■■□ 3.42
CGREF1-207ENST00000440612 MEGF6O75095 1541 aa36.41■■■■□ 3.42
CGREF1-207ENST00000440612 HTATSF1O43719 755 aaKnown RBP36.4■■■■□ 3.42
CGREF1-207ENST00000440612 CALD1Q05682 793 aaKnown RBP36.4■■■■□ 3.42
CGREF1-207ENST00000440612 BTG4Q9NY30 223 aa36.39■■■■□ 3.42
CGREF1-207ENST00000440612 CRB1P82279 1406 aa36.39■■■■□ 3.42
CGREF1-207ENST00000440612 MAP3K5Q99683 1374 aa36.39■■■■□ 3.42
CGREF1-207ENST00000440612 JCADQ9P266 1359 aa36.39■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms