RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 AXIN2Q9Y2T1 843 aa23.81■■□□□ 1.4
COL16A1-204ENST00000440437 RREB1Q92766 1687 aa23.8■■□□□ 1.4
COL16A1-204ENST00000440437 EDC4Q6P2E9 1401 aaKnown RBP23.8■■□□□ 1.4
COL16A1-204ENST00000440437 A0A1W2PP64 1363 aa23.79■■□□□ 1.4
COL16A1-204ENST00000440437 SBF2Q86WG5 1849 aa23.79■■□□□ 1.4
COL16A1-204ENST00000440437 WDR17Q8IZU2 1322 aa23.79■■□□□ 1.4
COL16A1-204ENST00000440437 EN1Q05925 392 aaPredicted RBP23.78■■□□□ 1.4
COL16A1-204ENST00000440437 PDE3BQ13370 1112 aa23.78■■□□□ 1.4
COL16A1-204ENST00000440437 SLC12A5Q9H2X9 1139 aa23.78■■□□□ 1.4
COL16A1-204ENST00000440437 ST20-MTHFSA0A0A6YYL1 179 aa23.77■■□□□ 1.4
COL16A1-204ENST00000440437 SOX12O15370 315 aa23.77■■□□□ 1.4
COL16A1-204ENST00000440437 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.77■■□□□ 1.4
COL16A1-204ENST00000440437 TMC1Q8TDI8 760 aa23.77■■□□□ 1.4
COL16A1-204ENST00000440437 LRP5O75197 1615 aa23.77■■□□□ 1.4
COL16A1-204ENST00000440437 TRIM37O94972 964 aa23.76■■□□□ 1.39
COL16A1-204ENST00000440437 HDGFL2Q7Z4V5 671 aaPredicted RBP23.76■■□□□ 1.39
COL16A1-204ENST00000440437 TOM1L2Q6ZVM7 507 aa23.75■■□□□ 1.39
COL16A1-204ENST00000440437 NME9Q86XW9 330 aa23.75■■□□□ 1.39
COL16A1-204ENST00000440437 NINLQ9Y2I6 1382 aa23.75■■□□□ 1.39
COL16A1-204ENST00000440437 OVOS2A0A0J9YW53 1432 aa23.75■■□□□ 1.39
COL16A1-204ENST00000440437 OVOS2Q6IE36 1432 aa23.75■■□□□ 1.39
COL16A1-204ENST00000440437 NUP188Q5SRE5 1749 aa23.74■■□□□ 1.39
COL16A1-204ENST00000440437 TERF2IPQ9NYB0 399 aa23.73■■□□□ 1.39
COL16A1-204ENST00000440437 OVOS2A0A0G2JMS6 1433 aa23.72■■□□□ 1.39
COL16A1-204ENST00000440437 RGPD3A6NKT7 1758 aaPredicted RBP23.72■■□□□ 1.39
COL16A1-204ENST00000440437 RGPD4Q7Z3J3 1758 aa23.72■■□□□ 1.39
COL16A1-204ENST00000440437 PARD3Q8TEW0 1356 aa23.71■■□□□ 1.39
COL16A1-204ENST00000440437 USP47Q96K76 1375 aa23.71■■□□□ 1.39
COL16A1-204ENST00000440437 EZH2Q15910 746 aaKnown RBP23.71■■□□□ 1.39
COL16A1-204ENST00000440437 CAMKK2Q96RR4 588 aa23.71■■□□□ 1.39
COL16A1-204ENST00000440437 SLC24A1O60721 1099 aa23.69■■□□□ 1.38
COL16A1-204ENST00000440437 CARD10Q9BWT7 1032 aa23.69■■□□□ 1.38
COL16A1-204ENST00000440437 APBA3O96018 575 aa23.68■■□□□ 1.38
COL16A1-204ENST00000440437 DDB1Q16531 1140 aa23.68■■□□□ 1.38
COL16A1-204ENST00000440437 CCDC7Q96M83 1385 aa23.67■■□□□ 1.38
COL16A1-204ENST00000440437 PSDA5PKW4 1024 aaPredicted RBP23.67■■□□□ 1.38
COL16A1-204ENST00000440437 C11orf95C9JLR9 678 aaPredicted RBP23.67■■□□□ 1.38
COL16A1-204ENST00000440437 FAM208AQ9UK61 1670 aaKnown RBP23.67■■□□□ 1.38
COL16A1-204ENST00000440437 ERBB3P21860 1342 aa23.66■■□□□ 1.38
COL16A1-204ENST00000440437 CSB-PGBD3P0DP91 1061 aa23.66■■□□□ 1.38
COL16A1-204ENST00000440437 CDCA7Q9BWT1 371 aaPredicted RBP23.66■■□□□ 1.38
COL16A1-204ENST00000440437 ANKRD36BQ8N2N9 1353 aa23.65■■□□□ 1.38
COL16A1-204ENST00000440437 CLSPNQ9HAW4 1339 aa23.65■■□□□ 1.38
COL16A1-204ENST00000440437 MYOM1P52179 1685 aa23.65■■□□□ 1.38
COL16A1-204ENST00000440437 BCL9O00512 1426 aa23.65■■□□□ 1.38
COL16A1-204ENST00000440437 TNS2Q63HR2 1409 aa23.64■■□□□ 1.37
COL16A1-204ENST00000440437 TIMELESSQ9UNS1 1208 aa23.63■■□□□ 1.37
COL16A1-204ENST00000440437 KIF20BQ96Q89 1820 aa23.62■■□□□ 1.37
COL16A1-204ENST00000440437 TMF1P82094 1093 aa23.62■■□□□ 1.37
COL16A1-204ENST00000440437 MARCH10Q8NA82 808 aaPredicted RBP23.61■■□□□ 1.37
COL16A1-204ENST00000440437 R3HDM1Q15032 1099 aaKnown RBP23.6■■□□□ 1.37
COL16A1-204ENST00000440437 NHSQ6T4R5 1651 aa23.58■■□□□ 1.37
COL16A1-204ENST00000440437 ANKRD24Q8TF21 1146 aa23.58■■□□□ 1.37
COL16A1-204ENST00000440437 RGPD2P0DJD1 1756 aa23.57■■□□□ 1.36
COL16A1-204ENST00000440437 COG3Q96JB2 828 aa23.56■■□□□ 1.36
COL16A1-204ENST00000440437 PCGF6Q9BYE7 350 aa23.56■■□□□ 1.36
COL16A1-204ENST00000440437 EXOC5O00471 708 aa23.55■■□□□ 1.36
COL16A1-204ENST00000440437 PTF1AQ7RTS3 328 aa23.55■■□□□ 1.36
COL16A1-204ENST00000440437 IP6K1Q92551 441 aa23.55■■□□□ 1.36
COL16A1-204ENST00000440437 BCL11BQ9C0K0 894 aaPredicted RBP23.55■■□□□ 1.36
COL16A1-204ENST00000440437 NLRP2Q9NX02 1062 aa23.55■■□□□ 1.36
COL16A1-204ENST00000440437 PLSCR1O15162 318 aa23.54■■□□□ 1.36
COL16A1-204ENST00000440437 MAP3K19Q56UN5 1328 aa23.53■■□□□ 1.36
COL16A1-204ENST00000440437 IL2RBP14784 551 aa23.52■■□□□ 1.36
COL16A1-204ENST00000440437 CDCA8Q53HL2 280 aa23.52■■□□□ 1.36
COL16A1-204ENST00000440437 SHANK3Q9BYB0 1731 aa23.5■■□□□ 1.35
COL16A1-204ENST00000440437 FYB1O15117 783 aa23.5■■□□□ 1.35
COL16A1-204ENST00000440437 FBLN1P23142 703 aa23.5■■□□□ 1.35
COL16A1-204ENST00000440437 RTL1A6NKG5 1358 aa23.5■■□□□ 1.35
COL16A1-204ENST00000440437 HOXC9P31274 260 aa23.49■■□□□ 1.35
COL16A1-204ENST00000440437 NBPF14Q5TI25 921 aa23.49■■□□□ 1.35
COL16A1-204ENST00000440437 BTAF1O14981 1849 aa23.49■■□□□ 1.35
COL16A1-204ENST00000440437 GGNBP2Q9H3C7 697 aa23.48■■□□□ 1.35
COL16A1-204ENST00000440437 CASZ1Q86V15 1759 aa23.47■■□□□ 1.35
COL16A1-204ENST00000440437 ANKRD26Q9UPS8 1709 aa23.45■■□□□ 1.34
COL16A1-204ENST00000440437 AMPHP49418 695 aa23.45■■□□□ 1.34
COL16A1-204ENST00000440437 LTV1Q96GA3 475 aaPredicted RBP23.45■■□□□ 1.34
COL16A1-204ENST00000440437 NSD3Q9BZ95 1437 aa23.44■■□□□ 1.34
COL16A1-204ENST00000440437 PROM2Q8N271 834 aa23.44■■□□□ 1.34
COL16A1-204ENST00000440437 ANO8Q9HCE9 1232 aaPredicted RBP23.44■■□□□ 1.34
COL16A1-204ENST00000440437 KCNQ2O43526 872 aa23.43■■□□□ 1.34
COL16A1-204ENST00000440437 RRS1Q15050 365 aaKnown RBP23.43■■□□□ 1.34
COL16A1-204ENST00000440437 CARD14Q9BXL6 1004 aa23.43■■□□□ 1.34
COL16A1-204ENST00000440437 DOT1LQ8TEK3 1739 aa23.42■■□□□ 1.34
COL16A1-204ENST00000440437 PAPPAQ13219 1627 aa23.42■■□□□ 1.34
COL16A1-204ENST00000440437 MEGF6O75095 1541 aa23.42■■□□□ 1.34
COL16A1-204ENST00000440437 KAT6BQ8WYB5 2073 aa23.41■■□□□ 1.34
COL16A1-204ENST00000440437 ACSBG1Q96GR2 724 aa23.4■■□□□ 1.34
COL16A1-204ENST00000440437 TXNRD1Q16881 649 aa23.39■■□□□ 1.33
COL16A1-204ENST00000440437 KIF24Q5T7B8 1368 aa23.39■■□□□ 1.33
COL16A1-204ENST00000440437 FLT4P35916 1363 aa23.38■■□□□ 1.33
COL16A1-204ENST00000440437 MAP2P11137 1827 aaKnown RBP23.38■■□□□ 1.33
COL16A1-204ENST00000440437 SMG6Q86US8 1419 aaKnown RBP23.37■■□□□ 1.33
COL16A1-204ENST00000440437 INSRP06213 1382 aa23.37■■□□□ 1.33
COL16A1-204ENST00000440437 CCER1Q8TC90 406 aaPredicted RBP23.36■■□□□ 1.33
COL16A1-204ENST00000440437 NBPF6Q5VWK0 638 aa23.35■■□□□ 1.33
COL16A1-204ENST00000440437 NBPF4Q96M43 638 aa23.35■■□□□ 1.33
COL16A1-204ENST00000440437 LY75O60449 1722 aa23.33■■□□□ 1.33
COL16A1-204ENST00000440437 EIF4G2P78344 907 aaKnown RBP eCLIP23.33■■□□□ 1.33
COL16A1-204ENST00000440437 HSP90AB2PQ58FF8 381 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms