RNA–Protein interactions for RNA: ENST00000440192.1

SDCBPP1-201, Transcript of syndecan binding protein pseudogene 1, humanhuman

BASIC

Gene SDCBPP1, Length 890 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP1-201ENST00000440192 C6orf118Q5T5N4 469 aa7.64□□□□□ -1.19
SDCBPP1-201ENST00000440192 CCDC116Q8IYX3 515 aa7.64□□□□□ -1.19
SDCBPP1-201ENST00000440192 IL27Q8NEV9 243 aa7.64□□□□□ -1.19
SDCBPP1-201ENST00000440192 NXF1Q9UBU9 619 aaKnown RBP7.64□□□□□ -1.19
SDCBPP1-201ENST00000440192 BMP2P12643 396 aa7.63□□□□□ -1.19
SDCBPP1-201ENST00000440192 RFC5P40937 340 aa7.63□□□□□ -1.19
SDCBPP1-201ENST00000440192 FBXO31Q5XUX0 539 aaPredicted RBP7.63□□□□□ -1.19
SDCBPP1-201ENST00000440192 KLF16Q9BXK1 252 aaPredicted RBP7.63□□□□□ -1.19
SDCBPP1-201ENST00000440192 CDV3Q9UKY7 258 aaKnown RBP7.63□□□□□ -1.19
SDCBPP1-201ENST00000440192 EMILIN1Q9Y6C2 1016 aa7.63□□□□□ -1.19
SDCBPP1-201ENST00000440192 GOPCQ9HD26 462 aa7.62□□□□□ -1.19
SDCBPP1-201ENST00000440192 MAN1A2O60476 641 aa7.61□□□□□ -1.19
SDCBPP1-201ENST00000440192 LCE2AQ5TA79 106 aaPredicted RBP7.61□□□□□ -1.19
SDCBPP1-201ENST00000440192 PGPEP1Q9NXJ5 209 aa7.61□□□□□ -1.19
SDCBPP1-201ENST00000440192 TMEM259Q4ZIN3 620 aa7.6□□□□□ -1.19
SDCBPP1-201ENST00000440192 C14orf37Q86TY3 774 aa7.6□□□□□ -1.19
SDCBPP1-201ENST00000440192 LINC00528Q8N1L1 170 aa7.6□□□□□ -1.19
SDCBPP1-201ENST00000440192 KCTD15Q96SI1 283 aaPredicted RBP7.6□□□□□ -1.19
SDCBPP1-201ENST00000440192 GPSM3Q9Y4H4 160 aa7.6□□□□□ -1.19
SDCBPP1-201ENST00000440192 INSM1Q01101 510 aaPredicted RBP7.59□□□□□ -1.19
SDCBPP1-201ENST00000440192 DHX9Q08211 1270 aaKnown RBP7.59□□□□□ -1.19
SDCBPP1-201ENST00000440192 NPAS3Q8IXF0 933 aa7.59□□□□□ -1.19
SDCBPP1-201ENST00000440192 MEIOBQ8N635 442 aa7.59□□□□□ -1.19
SDCBPP1-201ENST00000440192 TSEN34Q9BSV6 310 aaKnown RBP7.59□□□□□ -1.19
SDCBPP1-201ENST00000440192 HMX1Q9NP08 348 aaPredicted RBP7.59□□□□□ -1.19
SDCBPP1-201ENST00000440192 VEGFBP49765 207 aa7.58□□□□□ -1.2
SDCBPP1-201ENST00000440192 NBPF20Q3BBV1 942 aa7.58□□□□□ -1.2
SDCBPP1-201ENST00000440192 PPP1R26Q5T8A7 1209 aaPredicted RBP7.58□□□□□ -1.2
SDCBPP1-201ENST00000440192 DZIP3Q86Y13 1208 aaKnown RBP7.58□□□□□ -1.2
SDCBPP1-201ENST00000440192 ADAM32Q8TC27 787 aa7.58□□□□□ -1.2
SDCBPP1-201ENST00000440192 EPS8L1Q8TE68 723 aa7.58□□□□□ -1.2
SDCBPP1-201ENST00000440192 IRF7Q92985 503 aa7.58□□□□□ -1.2
SDCBPP1-201ENST00000440192 SOBPA7XYQ1 873 aa7.57□□□□□ -1.2
SDCBPP1-201ENST00000440192 WIPF1O43516 503 aa7.56□□□□□ -1.2
SDCBPP1-201ENST00000440192 RAB15P59190 212 aa7.56□□□□□ -1.2
SDCBPP1-201ENST00000440192 H3BM21 787 aa7.54□□□□□ -1.2
SDCBPP1-201ENST00000440192 CBLBQ13191 982 aa7.54□□□□□ -1.2
SDCBPP1-201ENST00000440192 INTS6LQ5JSJ4 861 aaKnown RBP7.54□□□□□ -1.2
SDCBPP1-201ENST00000440192 TRIM52Q96A61 297 aa7.53□□□□□ -1.2
SDCBPP1-201ENST00000440192 OCSTAMPQ9BR26 566 aa7.53□□□□□ -1.2
SDCBPP1-201ENST00000440192 SOS2Q07890 1332 aaPredicted RBP7.52□□□□□ -1.2
SDCBPP1-201ENST00000440192 TTLL8A6PVC2 850 aa7.52□□□□□ -1.21
SDCBPP1-201ENST00000440192 STK17AQ9UEE5 414 aa7.52□□□□□ -1.21
SDCBPP1-201ENST00000440192 GMPRP36959 345 aa7.51□□□□□ -1.21
SDCBPP1-201ENST00000440192 RELBQ01201 579 aa7.51□□□□□ -1.21
SDCBPP1-201ENST00000440192 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.51□□□□□ -1.21
SDCBPP1-201ENST00000440192 LCE2CQ5TA81 110 aa7.51□□□□□ -1.21
SDCBPP1-201ENST00000440192 Q6ZVU0 165 aa7.51□□□□□ -1.21
SDCBPP1-201ENST00000440192 TRIM34Q9BYJ4 488 aa7.51□□□□□ -1.21
SDCBPP1-201ENST00000440192 DNMT3LQ9UJW3 386 aa7.51□□□□□ -1.21
SDCBPP1-201ENST00000440192 FIGNL2A6NMB9 653 aa7.5□□□□□ -1.21
SDCBPP1-201ENST00000440192 ZBBXA8MT70 800 aa7.5□□□□□ -1.21
SDCBPP1-201ENST00000440192 APBB1O00213 710 aa7.5□□□□□ -1.21
SDCBPP1-201ENST00000440192 PCDHB9Q9Y5E1 797 aa7.5□□□□□ -1.21
SDCBPP1-201ENST00000440192 FAM181BA6NEQ2 426 aa7.49□□□□□ -1.21
SDCBPP1-201ENST00000440192 SPINT1O43278 529 aa7.49□□□□□ -1.21
SDCBPP1-201ENST00000440192 AGBL1Q96MI9 1066 aa7.49□□□□□ -1.21
SDCBPP1-201ENST00000440192 TMPRSS4Q9NRS4 437 aa7.49□□□□□ -1.21
SDCBPP1-201ENST00000440192 ZNF330Q9Y3S2 320 aaPredicted RBP7.49□□□□□ -1.21
SDCBPP1-201ENST00000440192 ERVH48-1M5A8F1 160 aa7.48□□□□□ -1.21
SDCBPP1-201ENST00000440192 ZNF784Q8NCA9 323 aaPredicted RBP7.48□□□□□ -1.21
SDCBPP1-201ENST00000440192 ZNF592Q92610 1267 aa7.48□□□□□ -1.21
SDCBPP1-201ENST00000440192 POLMQ9NP87 494 aaPredicted RBP7.48□□□□□ -1.21
SDCBPP1-201ENST00000440192 ERBB4Q15303 1308 aa7.48□□□□□ -1.21
SDCBPP1-201ENST00000440192 PPFIA3O75145 1194 aa7.47□□□□□ -1.21
SDCBPP1-201ENST00000440192 SEPT12Q8IYM1 358 aa7.47□□□□□ -1.21
SDCBPP1-201ENST00000440192 BANK1Q8NDB2 785 aa7.47□□□□□ -1.21
SDCBPP1-201ENST00000440192 GJD4Q96KN9 370 aaPredicted RBP7.47□□□□□ -1.21
SDCBPP1-201ENST00000440192 ADH1AP07327 375 aa7.46□□□□□ -1.22
SDCBPP1-201ENST00000440192 FBXO45P0C2W1 286 aa7.46□□□□□ -1.22
SDCBPP1-201ENST00000440192 ZSCAN1Q8NBB4 408 aa7.46□□□□□ -1.22
SDCBPP1-201ENST00000440192 INSM2Q96T92 566 aaPredicted RBP7.46□□□□□ -1.22
SDCBPP1-201ENST00000440192 ZNF395Q9H8N7 513 aaPredicted RBP7.46□□□□□ -1.22
SDCBPP1-201ENST00000440192 NDUFB9Q9Y6M9 179 aa7.46□□□□□ -1.22
SDCBPP1-201ENST00000440192 ESPNB1AK53 854 aa7.45□□□□□ -1.22
SDCBPP1-201ENST00000440192 PTSQ03393 145 aa7.45□□□□□ -1.22
SDCBPP1-201ENST00000440192 RNF20Q5VTR2 975 aa7.45□□□□□ -1.22
SDCBPP1-201ENST00000440192 CYLDQ9NQC7 956 aa7.45□□□□□ -1.22
SDCBPP1-201ENST00000440192 GIGYF1O75420 1035 aaPredicted RBP7.44□□□□□ -1.22
SDCBPP1-201ENST00000440192 VSIG8P0DPA2 414 aa7.44□□□□□ -1.22
SDCBPP1-201ENST00000440192 CTSOP43234 321 aaPredicted RBP7.44□□□□□ -1.22
SDCBPP1-201ENST00000440192 MCCD1P59942 119 aaPredicted RBP7.44□□□□□ -1.22
SDCBPP1-201ENST00000440192 NR1H3Q13133 447 aa7.44□□□□□ -1.22
SDCBPP1-201ENST00000440192 ESF1Q9H501 851 aaKnown RBP7.44□□□□□ -1.22
SDCBPP1-201ENST00000440192 PRM3Q9NNZ6 103 aa7.44□□□□□ -1.22
SDCBPP1-201ENST00000440192 CCDC125Q86Z20 511 aa7.43□□□□□ -1.22
SDCBPP1-201ENST00000440192 LILRA1O75019 489 aa7.42□□□□□ -1.22
SDCBPP1-201ENST00000440192 ADD1P35611 737 aaKnown RBP7.42□□□□□ -1.22
SDCBPP1-201ENST00000440192 PTGIRP43119 386 aa7.42□□□□□ -1.22
SDCBPP1-201ENST00000440192 CCDC155Q8N6L0 562 aa7.42□□□□□ -1.22
SDCBPP1-201ENST00000440192 ATP5J2-PTCD1G3V325 749 aa7.41□□□□□ -1.22
SDCBPP1-201ENST00000440192 SOCS7O14512 581 aa7.41□□□□□ -1.22
SDCBPP1-201ENST00000440192 MTMR14Q8NCE2 650 aa7.41□□□□□ -1.22
SDCBPP1-201ENST00000440192 SNRKQ9NRH2 765 aa7.41□□□□□ -1.22
SDCBPP1-201ENST00000440192 RNF217Q8TC41 542 aa7.4□□□□□ -1.22
SDCBPP1-201ENST00000440192 CDC14CA4D256 554 aa7.39□□□□□ -1.23
SDCBPP1-201ENST00000440192 MEN1O00255 615 aa7.39□□□□□ -1.23
SDCBPP1-201ENST00000440192 CC2D2BQ6DHV5 1058 aa7.39□□□□□ -1.23
SDCBPP1-201ENST00000440192 LYSMD3Q7Z3D4 306 aa7.39□□□□□ -1.23
SDCBPP1-201ENST00000440192 ARXQ96QS3 562 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms