RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, human

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMB1-205	ENST00000439976	WDR17	Q8IZU2	1322 aa		23.46	■■□□□ 1.35
LAMB1-205	ENST00000439976	SPON1	Q9HCB6	807 aa		23.46	■■□□□ 1.35
LAMB1-205	ENST00000439976	CASZ1	Q86V15	1759 aa		23.45	■■□□□ 1.34
LAMB1-205	ENST00000439976	BCL9	O00512	1426 aa		23.45	■■□□□ 1.34
LAMB1-205	ENST00000439976	MARCH10	Q8NA82	808 aa	Predicted RBP	23.45	■■□□□ 1.34
LAMB1-205	ENST00000439976	L3MBTL2	Q969R5	705 aa		23.45	■■□□□ 1.34
LAMB1-205	ENST00000439976	RGPD5	Q99666	1765 aa		23.45	■■□□□ 1.34
LAMB1-205	ENST00000439976	ARHGEF25	Q86VW2	580 aa		23.44	■■□□□ 1.34
LAMB1-205	ENST00000439976	PROM2	Q8N271	834 aa		23.44	■■□□□ 1.34
LAMB1-205	ENST00000439976	BCL11B	Q9C0K0	894 aa	Predicted RBP	23.44	■■□□□ 1.34
LAMB1-205	ENST00000439976	TRPM1	Q7Z4N2	1603 aa		23.44	■■□□□ 1.34
LAMB1-205	ENST00000439976	AKAP12	Q02952	1782 aa		23.43	■■□□□ 1.34
LAMB1-205	ENST00000439976	TTC21B	Q7Z4L5	1316 aa		23.42	■■□□□ 1.34
LAMB1-205	ENST00000439976	EVC2	Q86UK5	1308 aa		23.42	■■□□□ 1.34
LAMB1-205	ENST00000439976	NINL	Q9Y2I6	1382 aa		23.41	■■□□□ 1.34
LAMB1-205	ENST00000439976	PDGFD	Q9GZP0	370 aa	Predicted RBP	23.41	■■□□□ 1.34
LAMB1-205	ENST00000439976	NFAT5	O94916	1531 aa		23.41	■■□□□ 1.34
LAMB1-205	ENST00000439976	YY1	P25490	414 aa		23.4	■■□□□ 1.34
LAMB1-205	ENST00000439976	CDCA7	Q9BWT1	371 aa	Predicted RBP	23.39	■■□□□ 1.33
LAMB1-205	ENST00000439976	PPP1R1B	Q9UD71	204 aa	Predicted RBP	23.39	■■□□□ 1.33
LAMB1-205	ENST00000439976	ZNF692	Q9BU19	519 aa	Predicted RBP	23.38	■■□□□ 1.33
LAMB1-205	ENST00000439976	CARD10	Q9BWT7	1032 aa		23.38	■■□□□ 1.33
LAMB1-205	ENST00000439976	KCNH5	Q8NCM2	988 aa		23.37	■■□□□ 1.33
LAMB1-205	ENST00000439976	TTC21A	Q8NDW8	1320 aa		23.35	■■□□□ 1.33
LAMB1-205	ENST00000439976	SOX12	O15370	315 aa		23.35	■■□□□ 1.33
LAMB1-205	ENST00000439976	SIN3A	Q96ST3	1273 aa		23.34	■■□□□ 1.33
LAMB1-205	ENST00000439976	ABCC6	O95255	1503 aa		23.33	■■□□□ 1.33
LAMB1-205	ENST00000439976	MON2	Q7Z3U7	1717 aa		23.33	■■□□□ 1.32
LAMB1-205	ENST00000439976	ROCK2	O75116	1388 aa	Known RBP	23.32	■■□□□ 1.32
LAMB1-205	ENST00000439976	PTGER2	P43116	358 aa		23.32	■■□□□ 1.32
LAMB1-205	ENST00000439976	MYOM1	P52179	1685 aa		23.32	■■□□□ 1.32
LAMB1-205	ENST00000439976	UTRN	P46939	3433 aa		23.31	■■□□□ 1.32
LAMB1-205	ENST00000439976	CCDC7	Q96M83	1385 aa		23.31	■■□□□ 1.32
LAMB1-205	ENST00000439976	ZBTB7A	O95365	584 aa		23.31	■■□□□ 1.32
LAMB1-205	ENST00000439976	CSB-PGBD3	P0DP91	1061 aa		23.31	■■□□□ 1.32
LAMB1-205	ENST00000439976	TXNRD1	Q16881	649 aa		23.31	■■□□□ 1.32
LAMB1-205	ENST00000439976	TNS2	Q63HR2	1409 aa		23.31	■■□□□ 1.32
LAMB1-205	ENST00000439976	KTN1	Q86UP2	1357 aa	Known RBP	23.3	■■□□□ 1.32
LAMB1-205	ENST00000439976	USP54	Q70EL1	1684 aa		23.3	■■□□□ 1.32
LAMB1-205	ENST00000439976	EXOC5	O00471	708 aa		23.29	■■□□□ 1.32
LAMB1-205	ENST00000439976	CD163L1	Q9NR16	1453 aa		23.29	■■□□□ 1.32
LAMB1-205	ENST00000439976	NHS	Q6T4R5	1651 aa		23.28	■■□□□ 1.32
LAMB1-205	ENST00000439976	USP31	Q70CQ4	1352 aa		23.28	■■□□□ 1.32
LAMB1-205	ENST00000439976	SLC15A2	Q16348	729 aa		23.27	■■□□□ 1.32
LAMB1-205	ENST00000439976	ERBB3	P21860	1342 aa		23.26	■■□□□ 1.31
LAMB1-205	ENST00000439976	SBNO2	Q9Y2G9	1366 aa		23.26	■■□□□ 1.31
LAMB1-205	ENST00000439976	STK32B	Q9NY57	414 aa		23.25	■■□□□ 1.31
LAMB1-205	ENST00000439976	ATF5	Q9Y2D1	282 aa	Predicted RBP	23.25	■■□□□ 1.31
LAMB1-205	ENST00000439976	PAPPA	Q13219	1627 aa		23.24	■■□□□ 1.31
LAMB1-205	ENST00000439976	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	23.24	■■□□□ 1.31
LAMB1-205	ENST00000439976	SGIP1	Q9BQI5	828 aa		23.24	■■□□□ 1.31
LAMB1-205	ENST00000439976	LTN1	O94822	1766 aa		23.23	■■□□□ 1.31
LAMB1-205	ENST00000439976	DCAF8L1	A6NGE4	600 aa		23.23	■■□□□ 1.31
LAMB1-205	ENST00000439976	NME9	Q86XW9	330 aa		23.23	■■□□□ 1.31
LAMB1-205	ENST00000439976	NEUROD1	Q13562	356 aa		23.22	■■□□□ 1.31
LAMB1-205	ENST00000439976	ACSBG1	Q96GR2	724 aa		23.21	■■□□□ 1.31
LAMB1-205	ENST00000439976	MTFR1L	Q9H019	292 aa		23.2	■■□□□ 1.3
LAMB1-205	ENST00000439976	BTAF1	O14981	1849 aa		23.19	■■□□□ 1.3
LAMB1-205	ENST00000439976	SYT17	Q9BSW7	474 aa		23.19	■■□□□ 1.3
LAMB1-205	ENST00000439976	FHDC1	Q9C0D6	1143 aa	Predicted RBP	23.19	■■□□□ 1.3
LAMB1-205	ENST00000439976	NLRP2	Q9NX02	1062 aa		23.19	■■□□□ 1.3
LAMB1-205	ENST00000439976	IL2RB	P14784	551 aa		23.18	■■□□□ 1.3
LAMB1-205	ENST00000439976	ANKRD24	Q8TF21	1146 aa		23.16	■■□□□ 1.3
LAMB1-205	ENST00000439976	SLC12A5	Q9H2X9	1139 aa		23.16	■■□□□ 1.3
LAMB1-205	ENST00000439976	EDC4	Q6P2E9	1401 aa	Known RBP	23.15	■■□□□ 1.3
LAMB1-205	ENST00000439976	ZNF827	Q17R98	1081 aa		23.14	■■□□□ 1.29
LAMB1-205	ENST00000439976	LRRC4B	Q9NT99	713 aa		23.14	■■□□□ 1.29
LAMB1-205	ENST00000439976	ZNF784	Q8NCA9	323 aa	Predicted RBP	23.13	■■□□□ 1.29
LAMB1-205	ENST00000439976		A0A1W2PP64	1363 aa		23.13	■■□□□ 1.29
LAMB1-205	ENST00000439976	KAT6B	Q8WYB5	2073 aa		23.12	■■□□□ 1.29
LAMB1-205	ENST00000439976	TMC1	Q8TDI8	760 aa		23.12	■■□□□ 1.29
LAMB1-205	ENST00000439976	CARD11	Q9BXL7	1154 aa		23.12	■■□□□ 1.29
LAMB1-205	ENST00000439976	MAP3K5	Q99683	1374 aa		23.11	■■□□□ 1.29
LAMB1-205	ENST00000439976	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	23.1	■■□□□ 1.29
LAMB1-205	ENST00000439976	ARX	Q96QS3	562 aa		23.09	■■□□□ 1.29
LAMB1-205	ENST00000439976	CHD4	Q14839	1912 aa		23.09	■■□□□ 1.29
LAMB1-205	ENST00000439976	IP6K1	Q92551	441 aa		23.08	■■□□□ 1.29
LAMB1-205	ENST00000439976	AKT1S1	Q96B36	256 aa		23.08	■■□□□ 1.29
LAMB1-205	ENST00000439976	COL24A1	Q17RW2	1714 aa		23.07	■■□□□ 1.28
LAMB1-205	ENST00000439976	QSER1	Q2KHR3	1735 aa		23.07	■■□□□ 1.28
LAMB1-205	ENST00000439976	FAM208A	Q9UK61	1670 aa	Known RBP	23.06	■■□□□ 1.28
LAMB1-205	ENST00000439976	PUS7	Q96PZ0	661 aa	Known RBP	23.06	■■□□□ 1.28
LAMB1-205	ENST00000439976	TERF2IP	Q9NYB0	399 aa		23.06	■■□□□ 1.28
LAMB1-205	ENST00000439976	GOLGB1	Q14789	3259 aa	Known RBP	23.04	■■□□□ 1.28
LAMB1-205	ENST00000439976	TUBGCP6	Q96RT7	1819 aa		23.03	■■□□□ 1.28
LAMB1-205	ENST00000439976	SHANK3	Q9BYB0	1731 aa		23.03	■■□□□ 1.28
LAMB1-205	ENST00000439976	SLC27A3	Q5K4L6	730 aa		23.03	■■□□□ 1.28
LAMB1-205	ENST00000439976	DDX54	Q8TDD1	881 aa	Known RBP	23.03	■■□□□ 1.28
LAMB1-205	ENST00000439976	TESK2	Q96S53	571 aa		23.03	■■□□□ 1.28
LAMB1-205	ENST00000439976	NSD2	O96028	1365 aa		23.02	■■□□□ 1.28
LAMB1-205	ENST00000439976	LTV1	Q96GA3	475 aa	Predicted RBP	23.02	■■□□□ 1.28
LAMB1-205	ENST00000439976	MAP3K19	Q56UN5	1328 aa		23.02	■■□□□ 1.28
LAMB1-205	ENST00000439976	PNPLA7	Q6ZV29	1317 aa		23.02	■■□□□ 1.28
LAMB1-205	ENST00000439976	RGPD2	P0DJD1	1756 aa		23.01	■■□□□ 1.27
LAMB1-205	ENST00000439976	FBLN1	P23142	703 aa		23.01	■■□□□ 1.27
LAMB1-205	ENST00000439976	DOT1L	Q8TEK3	1739 aa		23.01	■■□□□ 1.27
LAMB1-205	ENST00000439976	LY75	O60449	1722 aa		23	■■□□□ 1.27
LAMB1-205	ENST00000439976	KCNQ4	P56696	695 aa		23	■■□□□ 1.27
LAMB1-205	ENST00000439976	SLC16A10	Q8TF71	515 aa		23	■■□□□ 1.27
LAMB1-205	ENST00000439976	ANKRD36B	Q8N2N9	1353 aa		23	■■□□□ 1.27

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms